RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 FAM104AQ969W3 186 aa13.19□□□□□ -0.3
SNX11-207ENST00000580875 CDC42SE2Q9NRR3 84 aa13.19□□□□□ -0.3
SNX11-207ENST00000580875 DPM2O94777 84 aa13.18□□□□□ -0.3
SNX11-207ENST00000580875 MRPL35Q9NZE8 188 aaKnown RBP13.18□□□□□ -0.3
SNX11-207ENST00000580875 GAGE12HA6NDE8 117 aa13.17□□□□□ -0.3
SNX11-207ENST00000580875 PLNP26678 52 aa13.17□□□□□ -0.3
SNX11-207ENST00000580875 C15orf56Q8N910 161 aa13.17□□□□□ -0.3
SNX11-207ENST00000580875 C7orf33Q8WU49 177 aa13.17□□□□□ -0.3
SNX11-207ENST00000580875 PLAC8Q9NZF1 115 aa13.17□□□□□ -0.3
SNX11-207ENST00000580875 IGKCP01834 107 aa13.16□□□□□ -0.3
SNX11-207ENST00000580875 ATOH7Q8N100 152 aa13.16□□□□□ -0.3
SNX11-207ENST00000580875 C12orf57Q99622 126 aa13.16□□□□□ -0.3
SNX11-207ENST00000580875 IGKV3OR2-268A0A0C4DH90 116 aa13.15□□□□□ -0.3
SNX11-207ENST00000580875 COX6A2Q02221 97 aa13.15□□□□□ -0.3
SNX11-207ENST00000580875 LINC00518Q8N0U6 118 aa13.15□□□□□ -0.3
SNX11-207ENST00000580875 S100A12P80511 92 aa13.14□□□□□ -0.31
SNX11-207ENST00000580875 IGLV4-69A0A075B6H9 119 aa13.13□□□□□ -0.31
SNX11-207ENST00000580875 UBE2D1P51668 147 aa13.13□□□□□ -0.31
SNX11-207ENST00000580875 HIGD2BQ4VC39 106 aa13.13□□□□□ -0.31
SNX11-207ENST00000580875 VAMP8Q9BV40 100 aa13.13□□□□□ -0.31
SNX11-207ENST00000580875 IGLC3P0DOY3 106 aa13.12□□□□□ -0.31
SNX11-207ENST00000580875 CHCHD10Q8WYQ3 142 aaPredicted RBP13.12□□□□□ -0.31
SNX11-207ENST00000580875 HSBP1L1C9JCN9 74 aa13.11□□□□□ -0.31
SNX11-207ENST00000580875 MAJINQ3KP22 176 aa13.11□□□□□ -0.31
SNX11-207ENST00000580875 TRAV13-1A0A0B4J241 112 aa13.1□□□□□ -0.31
SNX11-207ENST00000580875 A0A0J9YXV3 536 aa13.1□□□□□ -0.31
SNX11-207ENST00000580875 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
SNX11-207ENST00000580875 SEC11AP67812 179 aa13.1□□□□□ -0.31
SNX11-207ENST00000580875 GVQW2A0A096LPI5 108 aaPredicted RBP13.09□□□□□ -0.31
SNX11-207ENST00000580875 IGKV2-24A0A0C4DH68 120 aa13.09□□□□□ -0.31
SNX11-207ENST00000580875 TINCRA0A1B0GVN0 87 aa13.09□□□□□ -0.31
SNX11-207ENST00000580875 GEMIN7Q9H840 131 aaKnown RBP13.09□□□□□ -0.31
SNX11-207ENST00000580875 FAM19A3Q7Z5A8 133 aa13.08□□□□□ -0.32
SNX11-207ENST00000580875 PAM16Q9Y3D7 125 aa13.08□□□□□ -0.32
SNX11-207ENST00000580875 HERVK_113P63121 156 aa13.07□□□□□ -0.32
SNX11-207ENST00000580875 PRR3P79522 188 aaKnown RBP13.07□□□□□ -0.32
SNX11-207ENST00000580875 STPG4Q8N801 248 aa13.07□□□□□ -0.32
SNX11-207ENST00000580875 FOXI1Q12951 378 aa13.06□□□□□ -0.32
SNX11-207ENST00000580875 SS18Q15532 418 aa13.06□□□□□ -0.32
SNX11-207ENST00000580875 SPATA45Q537H7 98 aa13.06□□□□□ -0.32
SNX11-207ENST00000580875 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
SNX11-207ENST00000580875 LINC00959A0A1B0GUT2 108 aa13.05□□□□□ -0.32
SNX11-207ENST00000580875 CCL25O15444 150 aa13.05□□□□□ -0.32
SNX11-207ENST00000580875 ZNF22P17026 224 aaPredicted RBP13.05□□□□□ -0.32
SNX11-207ENST00000580875 HERVK_113P61574 105 aa13.05□□□□□ -0.32
SNX11-207ENST00000580875 LINC00242Q5T6M2 205 aa13.05□□□□□ -0.32
SNX11-207ENST00000580875 LINC01600Q96MT4 127 aa13.05□□□□□ -0.32
SNX11-207ENST00000580875 LINC00469Q8N7U9 141 aa13.04□□□□□ -0.32
SNX11-207ENST00000580875 LINC00474Q9P2X8 69 aa13.04□□□□□ -0.32
SNX11-207ENST00000580875 A0A096LNI7 61 aa13.03□□□□□ -0.32
SNX11-207ENST00000580875 XCL1P47992 114 aa13.03□□□□□ -0.32
SNX11-207ENST00000580875 PKIGQ9Y2B9 76 aa13.03□□□□□ -0.32
SNX11-207ENST00000580875 IGLV5-45A0A087WSX0 123 aa13.02□□□□□ -0.33
SNX11-207ENST00000580875 H3BRM9 83 aa13.02□□□□□ -0.33
SNX11-207ENST00000580875 ANKRD39Q53RE8 183 aa13.01□□□□□ -0.33
SNX11-207ENST00000580875 IGHV1-58A0A0C4DH39 117 aa13□□□□□ -0.33
SNX11-207ENST00000580875 TMEM223A0PJW6 202 aa12.99□□□□□ -0.33
SNX11-207ENST00000580875 CARD19Q96LW7 228 aa12.99□□□□□ -0.33
SNX11-207ENST00000580875 CDKN2A-AS1Q9UH64 79 aa12.99□□□□□ -0.33
SNX11-207ENST00000580875 E9PLD3 99 aa12.98□□□□□ -0.33
SNX11-207ENST00000580875 LINC00526Q96FQ7 95 aa12.98□□□□□ -0.33
SNX11-207ENST00000580875 NMUP48645 174 aa12.97□□□□□ -0.33
SNX11-207ENST00000580875 SPINK6Q6UWN8 80 aa12.97□□□□□ -0.33
SNX11-207ENST00000580875 TNXBP22105 4242 aa12.97□□□□□ -0.33
SNX11-207ENST00000580875 LRP2P98164 4655 aa12.97□□□□□ -0.33
SNX11-207ENST00000580875 TSTD3H0UI37 97 aa12.96□□□□□ -0.33
SNX11-207ENST00000580875 SPINK8P0C7L1 97 aa12.96□□□□□ -0.33
SNX11-207ENST00000580875 REG3GQ6UW15 175 aa12.96□□□□□ -0.33
SNX11-207ENST00000580875 CD164L2Q6UWJ8 174 aa12.96□□□□□ -0.33
SNX11-207ENST00000580875 IGHV3OR16-9A0A0B4J2B5 98 aa12.95□□□□□ -0.34
SNX11-207ENST00000580875 ZNF561-AS1K7EIQ3 104 aa12.95□□□□□ -0.34
SNX11-207ENST00000580875 PRO1933Q9H354 126 aa12.95□□□□□ -0.34
SNX11-207ENST00000580875 SYCNQ0VAF6 134 aa12.94□□□□□ -0.34
SNX11-207ENST00000580875 Q6ZRP5 223 aa12.94□□□□□ -0.34
SNX11-207ENST00000580875 A0A087WZ39 114 aa12.93□□□□□ -0.34
SNX11-207ENST00000580875 IGKV2D-26A0A0A0MRZ7 120 aa12.93□□□□□ -0.34
SNX11-207ENST00000580875 LEPROTO15243 131 aa12.93□□□□□ -0.34
SNX11-207ENST00000580875 PLEKHB2Q96CS7 222 aa12.93□□□□□ -0.34
SNX11-207ENST00000580875 SMIM1B2RUZ4 78 aa12.92□□□□□ -0.34
SNX11-207ENST00000580875 COX7A2LO14548 114 aa12.92□□□□□ -0.34
SNX11-207ENST00000580875 C5orf38Q86SI9 138 aa12.92□□□□□ -0.34
SNX11-207ENST00000580875 LINC01561Q8N1V8 128 aa12.92□□□□□ -0.34
SNX11-207ENST00000580875 C14orf144Q96I85 54 aa12.92□□□□□ -0.34
SNX11-207ENST00000580875 COX8AP10176 69 aa12.91□□□□□ -0.34
SNX11-207ENST00000580875 LGALS3P17931 250 aaKnown RBP12.91□□□□□ -0.34
SNX11-207ENST00000580875 KRTAP10-8P60410 259 aa12.91□□□□□ -0.34
SNX11-207ENST00000580875 SRSF9Q13242 221 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNX11-207ENST00000580875 J3QQQ9 107 aa12.9□□□□□ -0.34
SNX11-207ENST00000580875 PTTG1IPP53801 180 aa12.9□□□□□ -0.34
SNX11-207ENST00000580875 SLC25A34Q6PIV7 304 aa12.9□□□□□ -0.34
SNX11-207ENST00000580875 UQCR10Q9UDW1 63 aa12.9□□□□□ -0.34
SNX11-207ENST00000580875 IGLV5-39A0A0G2JS06 123 aa12.89□□□□□ -0.35
SNX11-207ENST00000580875 MALP21145 153 aa12.89□□□□□ -0.35
SNX11-207ENST00000580875 PCP2Q8IVA1 136 aa12.89□□□□□ -0.35
SNX11-207ENST00000580875 RNF213Q63HN8 5207 aa12.89□□□□□ -0.35
SNX11-207ENST00000580875 TSPEAR-AS2P59090 65 aa12.88□□□□□ -0.35
SNX11-207ENST00000580875 GAGE2BQ13066 116 aa12.88□□□□□ -0.35
SNX11-207ENST00000580875 LOC107984640A0A0U1RRK4 108 aa12.87□□□□□ -0.35
SNX11-207ENST00000580875 DLEU1O43261 78 aa12.86□□□□□ -0.35
SNX11-207ENST00000580875 APOMO95445 188 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms