RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 LINC00337Q8N6G1 96 aa9.77□□□□□ -0.84
ITGB4-207ENST00000580542 K7EMT4 169 aa9.77□□□□□ -0.85
ITGB4-207ENST00000580542 TMEM89A2RUT3 159 aa9.76□□□□□ -0.85
ITGB4-207ENST00000580542 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
ITGB4-207ENST00000580542 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
ITGB4-207ENST00000580542 UBL5Q9BZL1 73 aa9.76□□□□□ -0.85
ITGB4-207ENST00000580542 ORMDL1Q9P0S3 153 aa9.76□□□□□ -0.85
ITGB4-207ENST00000580542 IGKV3-20P01619 116 aa9.76□□□□□ -0.85
ITGB4-207ENST00000580542 PROK1P58294 105 aa9.75□□□□□ -0.85
ITGB4-207ENST00000580542 LINC00467Q9BRT7 94 aa9.75□□□□□ -0.85
ITGB4-207ENST00000580542 IGLV5-39A0A0G2JS06 123 aa9.75□□□□□ -0.85
ITGB4-207ENST00000580542 ZNF702PQ9H963 129 aa9.75□□□□□ -0.85
ITGB4-207ENST00000580542 CHCHD7Q9BUK0 85 aa9.75□□□□□ -0.85
ITGB4-207ENST00000580542 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
ITGB4-207ENST00000580542 SND1-IT1Q9HBX3 110 aa9.74□□□□□ -0.85
ITGB4-207ENST00000580542 TRBV10-3A0A0K0K1G6 114 aa9.74□□□□□ -0.85
ITGB4-207ENST00000580542 C10orf99Q6UWK7 81 aa9.73□□□□□ -0.85
ITGB4-207ENST00000580542 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
ITGB4-207ENST00000580542 PMAIP1Q13794 54 aa9.73□□□□□ -0.85
ITGB4-207ENST00000580542 SMIM1B2RUZ4 78 aa9.72□□□□□ -0.85
ITGB4-207ENST00000580542 MYO9AB2RTY4 2548 aa9.72□□□□□ -0.85
ITGB4-207ENST00000580542 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
ITGB4-207ENST00000580542 IGHV1OR15-1A0A075B7D0 117 aa9.72□□□□□ -0.85
ITGB4-207ENST00000580542 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
ITGB4-207ENST00000580542 SNRPD3P62318 126 aaKnown RBP9.72□□□□□ -0.85
ITGB4-207ENST00000580542 SPINK13Q1W4C9 94 aa9.72□□□□□ -0.85
ITGB4-207ENST00000580542 TLN2Q9Y4G6 2542 aa9.71□□□□□ -0.85
ITGB4-207ENST00000580542 Q9UF83 564 aa9.71□□□□□ -0.85
ITGB4-207ENST00000580542 K7EQG2 157 aa9.71□□□□□ -0.86
ITGB4-207ENST00000580542 BCE1O60756 84 aa9.71□□□□□ -0.86
ITGB4-207ENST00000580542 CUBNO60494 3623 aa9.71□□□□□ -0.86
ITGB4-207ENST00000580542 TRAV10A0A0B4J240 114 aa9.7□□□□□ -0.86
ITGB4-207ENST00000580542 JMJD7-PLA2G4BH0Y9G9 81 aa9.7□□□□□ -0.86
ITGB4-207ENST00000580542 NDUFC1O43677 76 aa9.7□□□□□ -0.86
ITGB4-207ENST00000580542 HTN1P15515 57 aa9.7□□□□□ -0.86
ITGB4-207ENST00000580542 LINC00242Q5T6M2 205 aa9.7□□□□□ -0.86
ITGB4-207ENST00000580542 A0A1W2PRX2 142 aa9.7□□□□□ -0.86
ITGB4-207ENST00000580542 ATP5EP56381 51 aaPredicted RBP9.7□□□□□ -0.86
ITGB4-207ENST00000580542 FAM229BQ4G0N7 80 aa9.69□□□□□ -0.86
ITGB4-207ENST00000580542 C11orf72Q8NBR9 251 aa9.69□□□□□ -0.86
ITGB4-207ENST00000580542 IGHV3OR16-12A0A075B7B8 117 aa9.69□□□□□ -0.86
ITGB4-207ENST00000580542 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
ITGB4-207ENST00000580542 ACANP16112 2415 aa9.69□□□□□ -0.86
ITGB4-207ENST00000580542 DNAJC9-AS1A6NH13 148 aa9.68□□□□□ -0.86
ITGB4-207ENST00000580542 RNASE1P07998 156 aaKnown RBP9.68□□□□□ -0.86
ITGB4-207ENST00000580542 ESM1Q9NQ30 184 aa9.68□□□□□ -0.86
ITGB4-207ENST00000580542 HAMPP81172 84 aa9.67□□□□□ -0.86
ITGB4-207ENST00000580542 Q6ZTI0 123 aa9.67□□□□□ -0.86
ITGB4-207ENST00000580542 LINC00158P58513 81 aa9.66□□□□□ -0.86
ITGB4-207ENST00000580542 RETNQ9HD89 108 aa9.66□□□□□ -0.86
ITGB4-207ENST00000580542 SORL1Q92673 2214 aa9.66□□□□□ -0.86
ITGB4-207ENST00000580542 MIFP14174 115 aa9.66□□□□□ -0.86
ITGB4-207ENST00000580542 SONP18583 2426 aaKnown RBP9.66□□□□□ -0.86
ITGB4-207ENST00000580542 LY6G6DO95868 133 aa9.65□□□□□ -0.86
ITGB4-207ENST00000580542 PAX4O43316 350 aa9.64□□□□□ -0.87
ITGB4-207ENST00000580542 Q6ZSN1 163 aa9.64□□□□□ -0.87
ITGB4-207ENST00000580542 UBE2E2Q96LR5 201 aa9.64□□□□□ -0.87
ITGB4-207ENST00000580542 SMR3AQ99954 134 aa9.63□□□□□ -0.87
ITGB4-207ENST00000580542 TOMM7Q9P0U1 55 aa9.63□□□□□ -0.87
ITGB4-207ENST00000580542 TM2D3Q9BRN9 247 aa9.63□□□□□ -0.87
ITGB4-207ENST00000580542 LINC01547P58512 204 aaPredicted RBP9.63□□□□□ -0.87
ITGB4-207ENST00000580542 TMEM256-PLSCR3K7ERE1 68 aa9.62□□□□□ -0.87
ITGB4-207ENST00000580542 CCL18P55774 89 aa9.62□□□□□ -0.87
ITGB4-207ENST00000580542 NF1P21359 2839 aa9.62□□□□□ -0.87
ITGB4-207ENST00000580542 PLAC8L1A1L4L8 177 aa9.61□□□□□ -0.87
ITGB4-207ENST00000580542 PRM2P04554 102 aa9.61□□□□□ -0.87
ITGB4-207ENST00000580542 PRR15Q8IV56 129 aa9.61□□□□□ -0.87
ITGB4-207ENST00000580542 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
ITGB4-207ENST00000580542 HIVEP1P15822 2718 aa9.6□□□□□ -0.87
ITGB4-207ENST00000580542 ESRGQ1W209 222 aa9.6□□□□□ -0.87
ITGB4-207ENST00000580542 A0A087WZ39 114 aa9.6□□□□□ -0.87
ITGB4-207ENST00000580542 Q8N3U1 123 aa9.6□□□□□ -0.87
ITGB4-207ENST00000580542 TRBV7-4A0A0J9YYF1 115 aa9.59□□□□□ -0.87
ITGB4-207ENST00000580542 NOTCH2Q04721 2471 aa9.59□□□□□ -0.87
ITGB4-207ENST00000580542 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
ITGB4-207ENST00000580542 DEFB131AP59861 70 aa9.58□□□□□ -0.88
ITGB4-207ENST00000580542 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
ITGB4-207ENST00000580542 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
ITGB4-207ENST00000580542 MTORP42345 2549 aa9.58□□□□□ -0.88
ITGB4-207ENST00000580542 HIVEP2P31629 2446 aa9.58□□□□□ -0.88
ITGB4-207ENST00000580542 Q8N814 137 aa9.58□□□□□ -0.88
ITGB4-207ENST00000580542 COX7B2Q8TF08 81 aa9.58□□□□□ -0.88
ITGB4-207ENST00000580542 C4orf3Q8WVX3 66 aa9.58□□□□□ -0.88
ITGB4-207ENST00000580542 A8MTW9 85 aa9.57□□□□□ -0.88
ITGB4-207ENST00000580542 Q6ZRU5 148 aa9.57□□□□□ -0.88
ITGB4-207ENST00000580542 NREPQ16612 68 aa9.56□□□□□ -0.88
ITGB4-207ENST00000580542 Q6ZVQ6 151 aa9.56□□□□□ -0.88
ITGB4-207ENST00000580542 LAMTOR3Q9UHA4 124 aa9.56□□□□□ -0.88
ITGB4-207ENST00000580542 SLURP1P55000 103 aa9.56□□□□□ -0.88
ITGB4-207ENST00000580542 CD164Q04900 197 aa9.56□□□□□ -0.88
ITGB4-207ENST00000580542 C18orf65Q6ZTR6 163 aa9.56□□□□□ -0.88
ITGB4-207ENST00000580542 DEFB136Q30KP8 78 aa9.55□□□□□ -0.88
ITGB4-207ENST00000580542 FAM19A3Q7Z5A8 133 aa9.55□□□□□ -0.88
ITGB4-207ENST00000580542 LINC01006Q8NI28 216 aa9.55□□□□□ -0.88
ITGB4-207ENST00000580542 FUSP35637 526 aaKnown RBP eCLIP9.55□□□□□ -0.88
ITGB4-207ENST00000580542 DAD1P61803 113 aa9.55□□□□□ -0.88
ITGB4-207ENST00000580542 LINC00167Q96N53 147 aa9.54□□□□□ -0.88
ITGB4-207ENST00000580542 TRBV6-4A0A1B0GX49 114 aa9.54□□□□□ -0.88
ITGB4-207ENST00000580542 Q6ZQT0 140 aa9.54□□□□□ -0.88
ITGB4-207ENST00000580542 SCXQ7RTU7 201 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms