RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 LINC01549A6NIU2 74 aa8.35□□□□□ -1.07
TRAF4-214ENST00000580073 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.35□□□□□ -1.07
TRAF4-214ENST00000580073 C2orf88Q9BSF0 95 aa8.35□□□□□ -1.07
TRAF4-214ENST00000580073 A0A087WZ39 114 aa8.34□□□□□ -1.07
TRAF4-214ENST00000580073 SYCNQ0VAF6 134 aa8.34□□□□□ -1.07
TRAF4-214ENST00000580073 PMVKQ15126 192 aa8.34□□□□□ -1.07
TRAF4-214ENST00000580073 IGLV4-69A0A075B6H9 119 aa8.33□□□□□ -1.08
TRAF4-214ENST00000580073 LOC107984640A0A0U1RRK4 108 aa8.33□□□□□ -1.08
TRAF4-214ENST00000580073 HSBP1O75506 76 aa8.33□□□□□ -1.08
TRAF4-214ENST00000580073 MALP21145 153 aa8.33□□□□□ -1.08
TRAF4-214ENST00000580073 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
TRAF4-214ENST00000580073 PAPPA-AS1Q5QFB9 102 aa8.33□□□□□ -1.08
TRAF4-214ENST00000580073 CDKN2A-AS1Q9UH64 79 aa8.33□□□□□ -1.08
TRAF4-214ENST00000580073 LRP2P98164 4655 aa8.32□□□□□ -1.08
TRAF4-214ENST00000580073 IGLV5-45A0A087WSX0 123 aa8.31□□□□□ -1.08
TRAF4-214ENST00000580073 TINCRA0A1B0GVN0 87 aa8.31□□□□□ -1.08
TRAF4-214ENST00000580073 ATP5LO75964 103 aa8.31□□□□□ -1.08
TRAF4-214ENST00000580073 PTTG1IPP53801 180 aa8.31□□□□□ -1.08
TRAF4-214ENST00000580073 NDUFA6P56556 154 aa8.31□□□□□ -1.08
TRAF4-214ENST00000580073 ORAOV1Q8WV07 137 aa8.31□□□□□ -1.08
TRAF4-214ENST00000580073 IFI27L1Q96BM0 104 aa8.31□□□□□ -1.08
TRAF4-214ENST00000580073 APOMO95445 188 aa8.3□□□□□ -1.08
TRAF4-214ENST00000580073 IGLC3P0DOY3 106 aa8.3□□□□□ -1.08
TRAF4-214ENST00000580073 C10orf25Q5T742 122 aa8.3□□□□□ -1.08
TRAF4-214ENST00000580073 FABP4P15090 132 aa8.29□□□□□ -1.08
TRAF4-214ENST00000580073 HERVK_113P63121 156 aa8.29□□□□□ -1.08
TRAF4-214ENST00000580073 SPAG11BQ08648 103 aa8.29□□□□□ -1.08
TRAF4-214ENST00000580073 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
TRAF4-214ENST00000580073 COA6Q5JTJ3 125 aaKnown RBP8.29□□□□□ -1.08
TRAF4-214ENST00000580073 LINC01561Q8N1V8 128 aa8.29□□□□□ -1.08
TRAF4-214ENST00000580073 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
TRAF4-214ENST00000580073 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
TRAF4-214ENST00000580073 SMIM1B2RUZ4 78 aa8.28□□□□□ -1.08
TRAF4-214ENST00000580073 ZNF22P17026 224 aaPredicted RBP8.28□□□□□ -1.08
TRAF4-214ENST00000580073 LINC00469Q8N7U9 141 aa8.28□□□□□ -1.08
TRAF4-214ENST00000580073 OR10D4PQ8NGN7 298 aa8.28□□□□□ -1.08
TRAF4-214ENST00000580073 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
TRAF4-214ENST00000580073 TRAV12-1A0A0B4J245 112 aa8.27□□□□□ -1.09
TRAF4-214ENST00000580073 LEPROTL1O95214 131 aa8.27□□□□□ -1.09
TRAF4-214ENST00000580073 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
TRAF4-214ENST00000580073 SEC11AP67812 179 aa8.27□□□□□ -1.09
TRAF4-214ENST00000580073 C2orf82Q6UX34 121 aa8.27□□□□□ -1.09
TRAF4-214ENST00000580073 UNQ6190/PRO20217Q6UXQ8 127 aa8.27□□□□□ -1.09
TRAF4-214ENST00000580073 C2orf48Q96LS8 159 aa8.27□□□□□ -1.09
TRAF4-214ENST00000580073 SPINK8P0C7L1 97 aa8.26□□□□□ -1.09
TRAF4-214ENST00000580073 RPL18AQ02543 176 aaKnown RBP8.26□□□□□ -1.09
TRAF4-214ENST00000580073 SRSF9Q13242 221 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRAF4-214ENST00000580073 ODF1Q14990 250 aa8.26□□□□□ -1.09
TRAF4-214ENST00000580073 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
TRAF4-214ENST00000580073 CHTOPQ9Y3Y2 248 aaKnown RBP8.26□□□□□ -1.09
TRAF4-214ENST00000580073 F8WDY8 70 aa8.25□□□□□ -1.09
TRAF4-214ENST00000580073 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
TRAF4-214ENST00000580073 H0Y8G0 127 aa8.24□□□□□ -1.09
TRAF4-214ENST00000580073 TOMM7Q9P0U1 55 aa8.24□□□□□ -1.09
TRAF4-214ENST00000580073 IGLV5-39A0A0G2JS06 123 aa8.23□□□□□ -1.09
TRAF4-214ENST00000580073 F8VRH5 84 aa8.23□□□□□ -1.09
TRAF4-214ENST00000580073 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
TRAF4-214ENST00000580073 Q8IZM0 81 aa8.23□□□□□ -1.09
TRAF4-214ENST00000580073 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
TRAF4-214ENST00000580073 PSORS1C2Q9UIG4 136 aa8.23□□□□□ -1.09
TRAF4-214ENST00000580073 C9orf116Q5BN46 136 aaPredicted RBP8.22□□□□□ -1.09
TRAF4-214ENST00000580073 DIRC1Q969H9 104 aa8.22□□□□□ -1.09
TRAF4-214ENST00000580073 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
TRAF4-214ENST00000580073 NDUFA1O15239 70 aa8.21□□□□□ -1.1
TRAF4-214ENST00000580073 C1orf137Q5JT78 98 aa8.21□□□□□ -1.1
TRAF4-214ENST00000580073 COX7B2Q8TF08 81 aa8.21□□□□□ -1.1
TRAF4-214ENST00000580073 PACRGQ96M98 296 aaPredicted RBP8.21□□□□□ -1.1
TRAF4-214ENST00000580073 TMEM223A0PJW6 202 aa8.2□□□□□ -1.1
TRAF4-214ENST00000580073 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
TRAF4-214ENST00000580073 TMEM170BQ5T4T1 132 aa8.2□□□□□ -1.1
TRAF4-214ENST00000580073 RNF213Q63HN8 5207 aa8.19□□□□□ -1.1
TRAF4-214ENST00000580073 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
TRAF4-214ENST00000580073 H3BRM9 83 aa8.19□□□□□ -1.1
TRAF4-214ENST00000580073 SYS1-DBNDD2H3BUS1 97 aa8.19□□□□□ -1.1
TRAF4-214ENST00000580073 PRSS2P07478 247 aa8.18□□□□□ -1.1
TRAF4-214ENST00000580073 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
TRAF4-214ENST00000580073 HIST3H2BBQ8N257 126 aa8.18□□□□□ -1.1
TRAF4-214ENST00000580073 MAP1LC3CQ9BXW4 147 aa8.18□□□□□ -1.1
TRAF4-214ENST00000580073 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
TRAF4-214ENST00000580073 IGLV7-43P04211 117 aa8.17□□□□□ -1.1
TRAF4-214ENST00000580073 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
TRAF4-214ENST00000580073 CKS1BP61024 79 aa8.16□□□□□ -1.1
TRAF4-214ENST00000580073 LINC01545Q5VT33 79 aa8.16□□□□□ -1.1
TRAF4-214ENST00000580073 PHF5AQ7RTV0 110 aaKnown RBP8.16□□□□□ -1.1
TRAF4-214ENST00000580073 IGLV1-50A0A075B6I6 118 aa8.15□□□□□ -1.1
TRAF4-214ENST00000580073 H0Y9J4 135 aa8.15□□□□□ -1.1
TRAF4-214ENST00000580073 DPM2O94777 84 aa8.15□□□□□ -1.1
TRAF4-214ENST00000580073 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
TRAF4-214ENST00000580073 KRTAP7-1Q8IUC3 87 aa8.15□□□□□ -1.1
TRAF4-214ENST00000580073 IGKCP01834 107 aa8.14□□□□□ -1.11
TRAF4-214ENST00000580073 RPL13AP40429 203 aaKnown RBP8.14□□□□□ -1.11
TRAF4-214ENST00000580073 SNRPEP62304 92 aaKnown RBP8.14□□□□□ -1.11
TRAF4-214ENST00000580073 C9orf129Q5T035 196 aaKnown RBP8.14□□□□□ -1.11
TRAF4-214ENST00000580073 PET117Q6UWS5 81 aa8.14□□□□□ -1.11
TRAF4-214ENST00000580073 ZNF625Q96I27 306 aaPredicted RBP8.14□□□□□ -1.11
TRAF4-214ENST00000580073 HIST1H2BLQ99880 126 aa8.14□□□□□ -1.11
TRAF4-214ENST00000580073 FAM168BA1KXE4 195 aa8.13□□□□□ -1.11
TRAF4-214ENST00000580073 C5orf52A6NGY3 159 aa8.13□□□□□ -1.11
TRAF4-214ENST00000580073 NDUFC2-KCTD14E9PQ53 114 aa8.13□□□□□ -1.11
TRAF4-214ENST00000580073 PLNP26678 52 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms