RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 SMIM1B2RUZ4 78 aa10.31□□□□□ -0.76
RARA-209ENST00000579727 SPINK8P0C7L1 97 aa10.31□□□□□ -0.76
RARA-209ENST00000579727 RPL37AP61513 92 aaKnown RBP10.31□□□□□ -0.76
RARA-209ENST00000579727 IGLV5-45A0A087WSX0 123 aa10.3□□□□□ -0.76
RARA-209ENST00000579727 F8WDY8 70 aa10.3□□□□□ -0.76
RARA-209ENST00000579727 HSBP1O75506 76 aa10.3□□□□□ -0.76
RARA-209ENST00000579727 SERF1AO75920 110 aa10.3□□□□□ -0.76
RARA-209ENST00000579727 ATP5LO75964 103 aa10.3□□□□□ -0.76
RARA-209ENST00000579727 LINC00310P59036 64 aa10.3□□□□□ -0.76
RARA-209ENST00000579727 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
RARA-209ENST00000579727 RNF151Q2KHN1 245 aa10.3□□□□□ -0.76
RARA-209ENST00000579727 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
RARA-209ENST00000579727 Q8IZM0 81 aa10.3□□□□□ -0.76
RARA-209ENST00000579727 IGLC3P0DOY3 106 aa10.29□□□□□ -0.76
RARA-209ENST00000579727 CKS1BP61024 79 aa10.29□□□□□ -0.76
RARA-209ENST00000579727 C6orf226Q5I0X4 101 aa10.29□□□□□ -0.76
RARA-209ENST00000579727 LINC00474Q9P2X8 69 aa10.29□□□□□ -0.76
RARA-209ENST00000579727 HMCN2Q8NDA2 5059 aa10.28□□□□□ -0.76
RARA-209ENST00000579727 Q6ZRP5 223 aa10.28□□□□□ -0.76
RARA-209ENST00000579727 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
RARA-209ENST00000579727 NUPR1O60356 82 aa10.27□□□□□ -0.77
RARA-209ENST00000579727 GAGE2EQ4V326 116 aa10.27□□□□□ -0.77
RARA-209ENST00000579727 COX7B2Q8TF08 81 aa10.27□□□□□ -0.77
RARA-209ENST00000579727 IFI27L1Q96BM0 104 aa10.27□□□□□ -0.77
RARA-209ENST00000579727 GAGE2DQ9UEU5 116 aa10.27□□□□□ -0.77
RARA-209ENST00000579727 A0A1W2PNN7 141 aa10.26□□□□□ -0.77
RARA-209ENST00000579727 ZNF22P17026 224 aaPredicted RBP10.26□□□□□ -0.77
RARA-209ENST00000579727 CHTOPQ9Y3Y2 248 aaKnown RBP10.26□□□□□ -0.77
RARA-209ENST00000579727 C11orf86A6NJI1 115 aa10.25□□□□□ -0.77
RARA-209ENST00000579727 H0Y8G0 127 aa10.25□□□□□ -0.77
RARA-209ENST00000579727 H3BRM9 83 aa10.25□□□□□ -0.77
RARA-209ENST00000579727 FAM168BA1KXE4 195 aa10.24□□□□□ -0.77
RARA-209ENST00000579727 TLX1NBP0CAT3 122 aa10.24□□□□□ -0.77
RARA-209ENST00000579727 HNRNPA3P51991 378 aaKnown RBP10.24□□□□□ -0.77
RARA-209ENST00000579727 C7orf33Q8WU49 177 aa10.24□□□□□ -0.77
RARA-209ENST00000579727 F8VRH5 84 aa10.23□□□□□ -0.77
RARA-209ENST00000579727 TMEM170BQ5T4T1 132 aa10.23□□□□□ -0.77
RARA-209ENST00000579727 NDUFC2-KCTD14E9PQ53 114 aa10.22□□□□□ -0.77
RARA-209ENST00000579727 LEPROTL1O95214 131 aa10.22□□□□□ -0.77
RARA-209ENST00000579727 FABP4P15090 132 aa10.22□□□□□ -0.77
RARA-209ENST00000579727 FAM19A5Q7Z5A7 132 aaPredicted RBP10.22□□□□□ -0.77
RARA-209ENST00000579727 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST1H2BKO60814 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST1H2BJP06899 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST1H2BOP23527 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST1H2BBP33778 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 CXCL5P42830 114 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST1H2BDP58876 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST1H2BCP62807 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST2H2BEQ16778 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.21□□□□□ -0.77
RARA-209ENST00000579727 PHF5AQ7RTV0 110 aaKnown RBP10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST1H2BHQ93079 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST1H2BNQ99877 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 HIST1H2BMQ99879 126 aa10.21□□□□□ -0.77
RARA-209ENST00000579727 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
RARA-209ENST00000579727 PKHD1L1Q86WI1 4243 aa10.19□□□□□ -0.78
RARA-209ENST00000579727 IGLV5-39A0A0G2JS06 123 aa10.19□□□□□ -0.78
RARA-209ENST00000579727 J3QL48 77 aa10.18□□□□□ -0.78
RARA-209ENST00000579727 PRR3P79522 188 aaKnown RBP10.18□□□□□ -0.78
RARA-209ENST00000579727 XAGE1AQ9HD64 81 aa10.18□□□□□ -0.78
RARA-209ENST00000579727 ATP6V1G1O75348 118 aa10.17□□□□□ -0.78
RARA-209ENST00000579727 ODF1Q14990 250 aa10.17□□□□□ -0.78
RARA-209ENST00000579727 KRTAP7-1Q8IUC3 87 aa10.17□□□□□ -0.78
RARA-209ENST00000579727 HSPB8Q9UJY1 196 aa10.16□□□□□ -0.78
RARA-209ENST00000579727 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
RARA-209ENST00000579727 ZNF625Q96I27 306 aaPredicted RBP10.15□□□□□ -0.78
RARA-209ENST00000579727 PMCHL2Q9BQD1 86 aa10.15□□□□□ -0.78
RARA-209ENST00000579727 LRP1Q07954 4544 aaKnown RBP10.15□□□□□ -0.79
RARA-209ENST00000579727 FAT3Q8TDW7 4589 aa10.14□□□□□ -0.79
RARA-209ENST00000579727 M0QXV9 152 aa10.14□□□□□ -0.79
RARA-209ENST00000579727 SERTAD4-AS1Q5TG53 156 aa10.14□□□□□ -0.79
RARA-209ENST00000579727 S100A1P23297 94 aa10.13□□□□□ -0.79
RARA-209ENST00000579727 PFN2P35080 140 aa10.13□□□□□ -0.79
RARA-209ENST00000579727 KRTAP11-1Q8IUC1 163 aa10.13□□□□□ -0.79
RARA-209ENST00000579727 PSORS1C2Q9UIG4 136 aa10.11□□□□□ -0.79
RARA-209ENST00000579727 MAP1LC3CQ9BXW4 147 aa10.1□□□□□ -0.79
RARA-209ENST00000579727 ERG28Q9UKR5 140 aa10.1□□□□□ -0.79
RARA-209ENST00000579727 UBE2BP63146 152 aa10.09□□□□□ -0.79
RARA-209ENST00000579727 DPM2O94777 84 aa10.08□□□□□ -0.8
RARA-209ENST00000579727 PLNP26678 52 aa10.08□□□□□ -0.8
RARA-209ENST00000579727 C1orf137Q5JT78 98 aa10.08□□□□□ -0.8
RARA-209ENST00000579727 A0A0U1RRA0 63 aa10.07□□□□□ -0.8
RARA-209ENST00000579727 KRTAP29-1A8MX34 341 aaPredicted RBP10.07□□□□□ -0.8
RARA-209ENST00000579727 C22orf24Q9Y442 160 aa10.07□□□□□ -0.8
RARA-209ENST00000579727 IGKCP01834 107 aa10.06□□□□□ -0.8
RARA-209ENST00000579727 TSPEAR-AS2P59090 65 aa10.06□□□□□ -0.8
RARA-209ENST00000579727 SYS1-DBNDD2H3BUS1 97 aa10.05□□□□□ -0.8
RARA-209ENST00000579727 COA6Q5JTJ3 125 aaKnown RBP10.04□□□□□ -0.8
RARA-209ENST00000579727 SFTA2Q6UW10 78 aa10.04□□□□□ -0.8
RARA-209ENST00000579727 SND1-IT1Q9HBX3 110 aa10.04□□□□□ -0.8
RARA-209ENST00000579727 GAGE10A6NGK3 116 aa10.03□□□□□ -0.8
RARA-209ENST00000579727 LINC00158P58513 81 aa10.03□□□□□ -0.8
RARA-209ENST00000579727 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
RARA-209ENST00000579727 LEPROTO15243 131 aa10.02□□□□□ -0.81
RARA-209ENST00000579727 SMIM13P0DJ93 91 aa10.02□□□□□ -0.81
RARA-209ENST00000579727 HERVK_113P61574 105 aa10.02□□□□□ -0.81
RARA-209ENST00000579727 COX17Q14061 63 aa10.02□□□□□ -0.81
RARA-209ENST00000579727 MRPL55Q7Z7F7 128 aaKnown RBP10.02□□□□□ -0.81
RARA-209ENST00000579727 NDUFA12Q9UI09 145 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms