RNA–Protein interactions for RNA: ENST00000578216.1

AP003396.5-201, humanhuman

TSL 5 BASIC

Gene AP003396.5, Length 632 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003396.5-201ENST00000578216 A0A096LNI7 61 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST1H2BKO60814 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST1H2BJP06899 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST1H2BOP23527 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST1H2BBP33778 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST1H2BDP58876 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST1H2BCP62807 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST2H2BEQ16778 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST1H2BHQ93079 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 CAMK2N2Q96S95 79 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST1H2BNQ99877 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 HIST1H2BMQ99879 126 aa7.01□□□□□ -1.29
AP003396.5-201ENST00000578216 IGLC3P0DOY3 106 aa7□□□□□ -1.29
AP003396.5-201ENST00000578216 FAM19A2Q8N3H0 131 aa7□□□□□ -1.29
AP003396.5-201ENST00000578216 LINC00469Q8N7U9 141 aa7□□□□□ -1.29
AP003396.5-201ENST00000578216 MRPL35Q9NZE8 188 aaKnown RBP7□□□□□ -1.29
AP003396.5-201ENST00000578216 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
AP003396.5-201ENST00000578216 FAT3Q8TDW7 4589 aa7□□□□□ -1.29
AP003396.5-201ENST00000578216 TRAV12-1A0A0B4J245 112 aa6.99□□□□□ -1.29
AP003396.5-201ENST00000578216 SMIM1B2RUZ4 78 aa6.99□□□□□ -1.29
AP003396.5-201ENST00000578216 NDUFA1O15239 70 aa6.99□□□□□ -1.29
AP003396.5-201ENST00000578216 RNF151Q2KHN1 245 aa6.99□□□□□ -1.29
AP003396.5-201ENST00000578216 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
AP003396.5-201ENST00000578216 Q6ZRP5 223 aa6.99□□□□□ -1.29
AP003396.5-201ENST00000578216 Q8IZM0 81 aa6.99□□□□□ -1.29
AP003396.5-201ENST00000578216 IFI27L1Q96BM0 104 aa6.99□□□□□ -1.29
AP003396.5-201ENST00000578216 PACRGQ96M98 296 aaPredicted RBP6.99□□□□□ -1.29
AP003396.5-201ENST00000578216 LOC107984640A0A0U1RRK4 108 aa6.98□□□□□ -1.29
AP003396.5-201ENST00000578216 NUPR1O60356 82 aa6.98□□□□□ -1.29
AP003396.5-201ENST00000578216 GAGE2BQ13066 116 aa6.98□□□□□ -1.29
AP003396.5-201ENST00000578216 LEPROTL1O95214 131 aa6.97□□□□□ -1.29
AP003396.5-201ENST00000578216 NDUFA6P56556 154 aa6.97□□□□□ -1.29
AP003396.5-201ENST00000578216 LINC01600Q96MT4 127 aa6.97□□□□□ -1.29
AP003396.5-201ENST00000578216 IGLV5-39A0A0G2JS06 123 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 TRBV30A0A0K0K1B3 111 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 C11orf86A6NJI1 115 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 F8VRH5 84 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 H3BRM9 83 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 PRSS2P07478 247 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 ZNF22P17026 224 aaPredicted RBP6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 CXCL5P42830 114 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 COA6Q5JTJ3 125 aaKnown RBP6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 C10orf25Q5T742 122 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 HSPB8Q9UJY1 196 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 HMCN2Q8NDA2 5059 aa6.96□□□□□ -1.3
AP003396.5-201ENST00000578216 TLX1NBP0CAT3 122 aa6.95□□□□□ -1.3
AP003396.5-201ENST00000578216 PTTG1IPP53801 180 aa6.95□□□□□ -1.3
AP003396.5-201ENST00000578216 C2orf82Q6UX34 121 aa6.95□□□□□ -1.3
AP003396.5-201ENST00000578216 UNQ6190/PRO20217Q6UXQ8 127 aa6.95□□□□□ -1.3
AP003396.5-201ENST00000578216 SPINK8P0C7L1 97 aa6.94□□□□□ -1.3
AP003396.5-201ENST00000578216 CKS1BP61024 79 aa6.94□□□□□ -1.3
AP003396.5-201ENST00000578216 RPL18AQ02543 176 aaKnown RBP6.94□□□□□ -1.3
AP003396.5-201ENST00000578216 ODF1Q14990 250 aa6.94□□□□□ -1.3
AP003396.5-201ENST00000578216 C6orf226Q5I0X4 101 aa6.94□□□□□ -1.3
AP003396.5-201ENST00000578216 COX7B2Q8TF08 81 aa6.94□□□□□ -1.3
AP003396.5-201ENST00000578216 TOMM7Q9P0U1 55 aa6.94□□□□□ -1.3
AP003396.5-201ENST00000578216 NDUFC2-KCTD14E9PQ53 114 aa6.91□□□□□ -1.3
AP003396.5-201ENST00000578216 FABP4P15090 132 aa6.91□□□□□ -1.3
AP003396.5-201ENST00000578216 TMEM170BQ5T4T1 132 aa6.91□□□□□ -1.3
AP003396.5-201ENST00000578216 TMEM223A0PJW6 202 aa6.9□□□□□ -1.3
AP003396.5-201ENST00000578216 PLNP26678 52 aa6.9□□□□□ -1.3
AP003396.5-201ENST00000578216 MAP1LC3CQ9BXW4 147 aa6.9□□□□□ -1.3
AP003396.5-201ENST00000578216 H0Y8G0 127 aa6.89□□□□□ -1.31
AP003396.5-201ENST00000578216 C9orf116Q5BN46 136 aaPredicted RBP6.89□□□□□ -1.31
AP003396.5-201ENST00000578216 C1orf137Q5JT78 98 aa6.89□□□□□ -1.31
AP003396.5-201ENST00000578216 SFTA2Q6UW10 78 aa6.89□□□□□ -1.31
AP003396.5-201ENST00000578216 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
AP003396.5-201ENST00000578216 DPM2O94777 84 aa6.88□□□□□ -1.31
AP003396.5-201ENST00000578216 SRSF9Q13242 221 aaKnown RBP eCLIP6.88□□□□□ -1.31
AP003396.5-201ENST00000578216 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
AP003396.5-201ENST00000578216 KRTAP10-8P60410 259 aa6.87□□□□□ -1.31
AP003396.5-201ENST00000578216 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
AP003396.5-201ENST00000578216 PSORS1C2Q9UIG4 136 aa6.87□□□□□ -1.31
AP003396.5-201ENST00000578216 UBR4Q5T4S7 5183 aa6.87□□□□□ -1.31
AP003396.5-201ENST00000578216 IGKCP01834 107 aa6.86□□□□□ -1.31
AP003396.5-201ENST00000578216 GAGE2EQ4V326 116 aa6.86□□□□□ -1.31
AP003396.5-201ENST00000578216 C9orf129Q5T035 196 aaKnown RBP6.86□□□□□ -1.31
AP003396.5-201ENST00000578216 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
AP003396.5-201ENST00000578216 DIRC1Q969H9 104 aa6.86□□□□□ -1.31
AP003396.5-201ENST00000578216 GAGE2DQ9UEU5 116 aa6.86□□□□□ -1.31
AP003396.5-201ENST00000578216 COX17Q14061 63 aa6.85□□□□□ -1.31
AP003396.5-201ENST00000578216 LINC01545Q5VT33 79 aa6.85□□□□□ -1.31
AP003396.5-201ENST00000578216 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
AP003396.5-201ENST00000578216 KRTAP7-1Q8IUC3 87 aa6.84□□□□□ -1.31
AP003396.5-201ENST00000578216 PMCHL2Q9BQD1 86 aa6.84□□□□□ -1.31
AP003396.5-201ENST00000578216 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
AP003396.5-201ENST00000578216 FAM168BA1KXE4 195 aa6.83□□□□□ -1.32
AP003396.5-201ENST00000578216 C3orf79P0CE67 100 aa6.83□□□□□ -1.32
AP003396.5-201ENST00000578216 HERVK_113P61574 105 aa6.83□□□□□ -1.32
AP003396.5-201ENST00000578216 UBE2BP63146 152 aa6.83□□□□□ -1.32
AP003396.5-201ENST00000578216 FAM19A5Q7Z5A7 132 aaPredicted RBP6.83□□□□□ -1.32
AP003396.5-201ENST00000578216 IGLV7-43P04211 117 aa6.82□□□□□ -1.32
AP003396.5-201ENST00000578216 TSPEAR-AS2P59090 65 aa6.82□□□□□ -1.32
AP003396.5-201ENST00000578216 HIST3H2BBQ8N257 126 aa6.82□□□□□ -1.32
AP003396.5-201ENST00000578216 PLEKHB2Q96CS7 222 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms