RNA–Protein interactions for RNA: ENST00000577468.2

PTPRM-204, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-204ENST00000577468 IGHV3-64DA0A0J9YX35 117 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 ODF3BA8MYP8 253 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 H0YGX0 51 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 H3BQ85 93 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 IGLV1-44P01699 117 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 CNBPP62633 177 aaKnown RBP1.94□□□□□ -2.1
PTPRM-204ENST00000577468 DEFB114Q30KQ6 69 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 C1orf137Q5JT78 98 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 DEFB106AQ8N104 65 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 C14orf178Q8N769 122 aaPredicted RBP1.94□□□□□ -2.1
PTPRM-204ENST00000577468 WFDC9Q8NEX5 89 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 DMAC1Q96GE9 116 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 LINC00208Q96KT6 92 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 MRPL36Q9P0J6 103 aaKnown RBP1.94□□□□□ -2.1
PTPRM-204ENST00000577468 MINOS1-NBL1R4GNA1 71 aa1.94□□□□□ -2.1
PTPRM-204ENST00000577468 MED12Q93074 2177 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 CR1P17927 2039 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 IGLV7-46A0A075B6I9 117 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 IGHV3-64A0A075B6Q5 118 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 IGLV3-1P01715 115 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 IGHV3-53P01767 116 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 CTSGP08311 255 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 LINC00322Q6ZN03 302 aaPredicted RBP1.93□□□□□ -2.1
PTPRM-204ENST00000577468 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
PTPRM-204ENST00000577468 DEFB123Q8N688 67 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 KLHL30-AS1Q8NEE0 82 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 COX7B2Q8TF08 81 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 ZCCHC13Q8WW36 166 aaKnown RBP1.93□□□□□ -2.1
PTPRM-204ENST00000577468 PLAC8Q9NZF1 115 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 A0A0C4DFX4 3053 aa1.93□□□□□ -2.1
PTPRM-204ENST00000577468 KIAA0100Q14667 2235 aaKnown RBP1.93□□□□□ -2.1
PTPRM-204ENST00000577468 NDUFAF8A1L188 74 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 PANO1I0J062 215 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 IGKV1-17P01599 117 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 IGLV3-19P01714 112 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 ERHP84090 104 aaKnown RBP1.92□□□□□ -2.1
PTPRM-204ENST00000577468 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 C10orf113Q5VZT2 155 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 KRTAP26-1Q6PEX3 210 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 C16orf74Q96GX8 76 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 LITAFQ99732 161 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 HIGD2AQ9BW72 106 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 TTTY12Q9BZ98 90 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 PRR34Q9NV39 138 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 KMT2BQ9UMN6 2715 aaPredicted RBP1.92□□□□□ -2.1
PTPRM-204ENST00000577468 COL4A5P29400 1685 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 FREM1Q5H8C1 2179 aa1.92□□□□□ -2.1
PTPRM-204ENST00000577468 CEP192Q8TEP8 1941 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 DIDO1Q9BTC0 2240 aaKnown RBP1.91□□□□□ -2.1
PTPRM-204ENST00000577468 CACNA1GO43497 2377 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 IGLV4-69A0A075B6H9 119 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 LOC110117498A0A087WWA1 95 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 NUPR2A6NF83 97 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 CCL22O00626 93 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 KRTAP12-2P59991 146 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 Q8N377 158 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 MAPK1IP1LQ8NDC0 245 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 SMIM2Q9BVW6 85 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 WFDC10AQ9H1F0 79 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 COL4A2P08572 1712 aa1.91□□□□□ -2.1
PTPRM-204ENST00000577468 H0Y9P7 68 aa1.9□□□□□ -2.11
PTPRM-204ENST00000577468 UQCR11O14957 56 aa1.9□□□□□ -2.11
PTPRM-204ENST00000577468 IGLV7-43P04211 117 aa1.9□□□□□ -2.11
PTPRM-204ENST00000577468 MGPP08493 103 aa1.9□□□□□ -2.11
PTPRM-204ENST00000577468 ZNF625Q96I27 306 aaPredicted RBP1.9□□□□□ -2.11
PTPRM-204ENST00000577468 DOCK10Q96BY6 2186 aa1.9□□□□□ -2.11
PTPRM-204ENST00000577468 BAHCC1Q9P281 2608 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 DNAJC13O75165 2243 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 IGKV3-7A0A075B6H7 116 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 H3BSH0 61 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 CCL18P55774 89 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 SPINK7P58062 85 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 HAMPP81172 84 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 HCP5Q6MZN7 132 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 GAFA1Q96PS6 74 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 RNF5Q99942 180 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 KLK9Q9UKQ9 250 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 ZFHX3Q15911 3703 aa1.89□□□□□ -2.11
PTPRM-204ENST00000577468 CACNA1DQ01668 2161 aa1.88□□□□□ -2.11
PTPRM-204ENST00000577468 ADAMTS9Q9P2N4 1935 aa1.88□□□□□ -2.11
PTPRM-204ENST00000577468 A0A1B0GU33 70 aa1.88□□□□□ -2.11
PTPRM-204ENST00000577468 RNASE3P12724 160 aaKnown RBP1.88□□□□□ -2.11
PTPRM-204ENST00000577468 CCL3L1P16619 93 aa1.88□□□□□ -2.11
PTPRM-204ENST00000577468 SPATA8Q6RVD6 105 aa1.88□□□□□ -2.11
PTPRM-204ENST00000577468 KLK12Q9UKR0 248 aa1.88□□□□□ -2.11
PTPRM-204ENST00000577468 SZT2Q5T011 3432 aa1.88□□□□□ -2.11
PTPRM-204ENST00000577468 PRRC2BQ5JSZ5 2229 aaKnown RBP1.87□□□□□ -2.11
PTPRM-204ENST00000577468 COL6A3P12111 3177 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 NDUFA4O00483 81 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 NDUFA1O15239 70 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 GIG44P09565 113 aaPredicted RBP1.87□□□□□ -2.11
PTPRM-204ENST00000577468 RPS27P42677 84 aaKnown RBP1.87□□□□□ -2.11
PTPRM-204ENST00000577468 DEFB112Q30KQ8 113 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 Q5W150 140 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 C9orf163Q8N9P6 203 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 C4orf3Q8WVX3 66 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 SPRR4Q96PI1 79 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms