RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 CHCHD7Q9BUK0 85 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 TMEM167BQ9NRX6 74 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 TMEM14CQ9P0S9 112 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 FAM215AQ9Y5M1 114 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 MPDZO75970 2070 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 TIAM2Q8IVF5 1701 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 IGKV1OR2-108A0A075B7D4 117 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 TRAV21A0A0B4J279 112 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 A0A0J9YX75 114 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 A0A1B0GUT8 65 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 LOC730098B7Z3J9 87 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 M0R3E3 92 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 BPY2O14599 106 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 IGHV1-46P01743 117 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 IGHV1-8P0DP01 117 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 IAPPP10997 89 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 SPINK7P58062 85 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 SPANXN5Q5MJ07 72 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 LINC01590Q5TEZ4 76 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 LINC00322Q6ZN03 302 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 TMEM105Q8N8V8 129 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 ARHGAP5-AS1Q96IT6 56 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 Q9BRP9 147 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 HIGD2AQ9BW72 106 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 TTTY12Q9BZ98 90 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 LINC01558Q9Y6Z2 57 aa1.75□□□□□ -2.13
SMCHD1-202ENST00000577300 COL4A1P02462 1669 aa1.74□□□□□ -2.13
SMCHD1-202ENST00000577300 KRTAP26-1Q6PEX3 210 aa1.74□□□□□ -2.13
SMCHD1-202ENST00000577300 ZNF625Q96I27 306 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-202ENST00000577300 C14orf132Q9NPU4 83 aa1.74□□□□□ -2.13
SMCHD1-202ENST00000577300 ORMDL1Q9P0S3 153 aa1.74□□□□□ -2.13
SMCHD1-202ENST00000577300 HEATR5BQ9P2D3 2071 aa1.74□□□□□ -2.13
SMCHD1-202ENST00000577300 ESPL1Q14674 2120 aa1.73□□□□□ -2.13
SMCHD1-202ENST00000577300 MYO7AQ13402 2215 aa1.73□□□□□ -2.13
SMCHD1-202ENST00000577300 IGHV1-3A0A0C4DH29 117 aa1.73□□□□□ -2.13
SMCHD1-202ENST00000577300 FXYD4P59646 89 aa1.73□□□□□ -2.13
SMCHD1-202ENST00000577300 SPAG11BQ08648 103 aa1.73□□□□□ -2.13
SMCHD1-202ENST00000577300 KRTAP25-1Q3LHN0 102 aa1.73□□□□□ -2.13
SMCHD1-202ENST00000577300 SPAG11AQ6PDA7 123 aa1.73□□□□□ -2.13
SMCHD1-202ENST00000577300 MIR7-3HGQ8N6C7 128 aa1.73□□□□□ -2.13
SMCHD1-202ENST00000577300 MUC4Q99102 2169 aa1.73□□□□□ -2.13
SMCHD1-202ENST00000577300 PI4KAP42356 2102 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 IGHV1-18A0A0C4DH31 117 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 TRBV6-1A0A0K0K1D8 114 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 ODF3BA8MYP8 253 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 H3BSH0 61 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 PPP1R17O96001 155 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 KRTAP13-4Q3LI77 160 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 FAM74A4Q5TZK3 123 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 UBL5Q9BZL1 73 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 LENEPQ9Y5L5 61 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 ZFHX3Q15911 3703 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 BCORQ6W2J9 1755 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 TET1Q8NFU7 2136 aa1.72□□□□□ -2.13
SMCHD1-202ENST00000577300 ARHGAP32A7KAX9 2087 aa1.71□□□□□ -2.13
SMCHD1-202ENST00000577300 PLXNB2O15031 1838 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 IGLV10-54A0A075B6I4 117 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 IGKV2-24A0A0C4DH68 120 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 TRBV10-1A0A0K0K1A3 114 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 H3BPC8 53 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 C1orf137Q5JT78 98 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 MYO7BQ6PIF6 2116 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 SPATA8Q6RVD6 105 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 C9orf163Q8N9P6 203 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 MINOS1-NBL1R4GNA1 71 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 SEC16AO15027 2179 aa1.71□□□□□ -2.14
SMCHD1-202ENST00000577300 IGKV3-7A0A075B6H7 116 aa1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 LINC00959A0A1B0GUT2 108 aa1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 NCR3O14931 201 aa1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 Q86TA4 180 aa1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 COX7B2Q8TF08 81 aa1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 LINC00208Q96KT6 92 aa1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 RNF5Q99942 180 aa1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 MRPL36Q9P0J6 103 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 R4GMQ9 66 aa1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 SPTBP11277 2137 aa1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 MDC1Q14676 2089 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-202ENST00000577300 INTS1Q8N201 2190 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-202ENST00000577300 NUPR2A6NF83 97 aa1.69□□□□□ -2.14
SMCHD1-202ENST00000577300 JMJD7-PLA2G4BH0Y9G9 81 aa1.69□□□□□ -2.14
SMCHD1-202ENST00000577300 IGHV3-53P01767 116 aa1.69□□□□□ -2.14
SMCHD1-202ENST00000577300 PDE6GP18545 87 aa1.69□□□□□ -2.14
SMCHD1-202ENST00000577300 SPANXA2-OT1Q8N9U9 137 aa1.69□□□□□ -2.14
SMCHD1-202ENST00000577300 SPRR4Q96PI1 79 aa1.69□□□□□ -2.14
SMCHD1-202ENST00000577300 ZGRF1Q86YA3 2104 aa1.69□□□□□ -2.14
SMCHD1-202ENST00000577300 TNRC6BQ9UPQ9 1833 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 CCL22O00626 93 aa1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 NDUFB1O75438 58 aa1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 CRIP1P50238 77 aa1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 HAMPP81172 84 aa1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 C10orf113Q5VZT2 155 aa1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 Q6ZTI0 123 aa1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 WFDC10AQ9H1F0 79 aa1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 SVILO95425 2214 aa1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 DIDO1Q9BTC0 2240 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-202ENST00000577300 LOC110117498A0A087WWA1 95 aa1.67□□□□□ -2.14
SMCHD1-202ENST00000577300 IGKV3OR2-268A0A0C4DH90 116 aa1.67□□□□□ -2.14
SMCHD1-202ENST00000577300 H0YGX0 51 aa1.67□□□□□ -2.14
SMCHD1-202ENST00000577300 RNASE3P12724 160 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms