RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 COX7B2Q8TF08 81 aa9.02□□□□□ -0.97
RPAIN-217ENST00000575711 PMCHL2Q9BQD1 86 aa9.02□□□□□ -0.97
RPAIN-217ENST00000575711 PKIGQ9Y2B9 76 aa9.02□□□□□ -0.97
RPAIN-217ENST00000575711 C3orf79P0CE67 100 aa9.01□□□□□ -0.97
RPAIN-217ENST00000575711 CXCL5P42830 114 aa9.01□□□□□ -0.97
RPAIN-217ENST00000575711 KRTDAPP60985 99 aa9.01□□□□□ -0.97
RPAIN-217ENST00000575711 PET117Q6UWS5 81 aa9.01□□□□□ -0.97
RPAIN-217ENST00000575711 SDIM1Q6ZPB5 146 aa9.01□□□□□ -0.97
RPAIN-217ENST00000575711 BIRC6Q9NR09 4857 aa9.01□□□□□ -0.97
RPAIN-217ENST00000575711 IGLV5-39A0A0G2JS06 123 aa9□□□□□ -0.97
RPAIN-217ENST00000575711 TMEM223A0PJW6 202 aa9□□□□□ -0.97
RPAIN-217ENST00000575711 IGKCP01834 107 aa9□□□□□ -0.97
RPAIN-217ENST00000575711 SNRPEP62304 92 aaKnown RBP9□□□□□ -0.97
RPAIN-217ENST00000575711 RNF151Q2KHN1 245 aa9□□□□□ -0.97
RPAIN-217ENST00000575711 C2orf82Q6UX34 121 aa9□□□□□ -0.97
RPAIN-217ENST00000575711 UNQ6190/PRO20217Q6UXQ8 127 aa9□□□□□ -0.97
RPAIN-217ENST00000575711 C10orf25Q5T742 122 aa8.99□□□□□ -0.97
RPAIN-217ENST00000575711 LINC01545Q5VT33 79 aa8.99□□□□□ -0.97
RPAIN-217ENST00000575711 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
RPAIN-217ENST00000575711 TRBV30A0A0K0K1B3 111 aa8.98□□□□□ -0.97
RPAIN-217ENST00000575711 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
RPAIN-217ENST00000575711 Q6ZSA8 131 aa8.98□□□□□ -0.97
RPAIN-217ENST00000575711 FAM30AQ9NZY2 134 aa8.98□□□□□ -0.97
RPAIN-217ENST00000575711 C6orf48Q9UBA6 75 aa8.98□□□□□ -0.97
RPAIN-217ENST00000575711 C20orf202A1L168 122 aa8.97□□□□□ -0.97
RPAIN-217ENST00000575711 C5orf52A6NGY3 159 aa8.97□□□□□ -0.97
RPAIN-217ENST00000575711 CDK2AP2O75956 126 aa8.97□□□□□ -0.97
RPAIN-217ENST00000575711 HERVK_113P61574 105 aa8.97□□□□□ -0.97
RPAIN-217ENST00000575711 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
RPAIN-217ENST00000575711 RPL18AQ02543 176 aaKnown RBP8.95□□□□□ -0.98
RPAIN-217ENST00000575711 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
RPAIN-217ENST00000575711 LINC00474Q9P2X8 69 aa8.95□□□□□ -0.98
RPAIN-217ENST00000575711 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.95□□□□□ -0.98
RPAIN-217ENST00000575711 A0A096LNI7 61 aa8.94□□□□□ -0.98
RPAIN-217ENST00000575711 TLX1NBP0CAT3 122 aa8.94□□□□□ -0.98
RPAIN-217ENST00000575711 CHTF8P0CG12 524 aa8.94□□□□□ -0.98
RPAIN-217ENST00000575711 GAGE2BQ13066 116 aa8.94□□□□□ -0.98
RPAIN-217ENST00000575711 AKR1D1P51857 326 aa8.93□□□□□ -0.98
RPAIN-217ENST00000575711 PTTG1IPP53801 180 aa8.93□□□□□ -0.98
RPAIN-217ENST00000575711 XGP55808 180 aa8.93□□□□□ -0.98
RPAIN-217ENST00000575711 C9orf116Q5BN46 136 aaPredicted RBP8.93□□□□□ -0.98
RPAIN-217ENST00000575711 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
RPAIN-217ENST00000575711 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
RPAIN-217ENST00000575711 TMA7Q9Y2S6 64 aaKnown RBP8.93□□□□□ -0.98
RPAIN-217ENST00000575711 DNAH8Q96JB1 4490 aa8.93□□□□□ -0.98
RPAIN-217ENST00000575711 NDUFC2-KCTD14E9PQ53 114 aa8.92□□□□□ -0.98
RPAIN-217ENST00000575711 PANO1I0J062 215 aa8.92□□□□□ -0.98
RPAIN-217ENST00000575711 LEPROTO15243 131 aa8.92□□□□□ -0.98
RPAIN-217ENST00000575711 HAMPP81172 84 aa8.92□□□□□ -0.98
RPAIN-217ENST00000575711 CIRBPQ14011 172 aaKnown RBP8.92□□□□□ -0.98
RPAIN-217ENST00000575711 MAJINQ3KP22 176 aa8.92□□□□□ -0.98
RPAIN-217ENST00000575711 SCXQ7RTU7 201 aa8.92□□□□□ -0.98
RPAIN-217ENST00000575711 PLEKHB2Q96CS7 222 aa8.92□□□□□ -0.98
RPAIN-217ENST00000575711 APOBP04114 4563 aaKnown RBP8.92□□□□□ -0.98
RPAIN-217ENST00000575711 Q6ZRP5 223 aa8.91□□□□□ -0.98
RPAIN-217ENST00000575711 E9PLD3 99 aa8.9□□□□□ -0.98
RPAIN-217ENST00000575711 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
RPAIN-217ENST00000575711 GAGE2EQ4V326 116 aa8.9□□□□□ -0.98
RPAIN-217ENST00000575711 CIRBP-AS1Q8TBR5 109 aa8.9□□□□□ -0.98
RPAIN-217ENST00000575711 ZNF625Q96I27 306 aaPredicted RBP8.9□□□□□ -0.98
RPAIN-217ENST00000575711 GAGE2DQ9UEU5 116 aa8.9□□□□□ -0.98
RPAIN-217ENST00000575711 J3QQQ9 107 aa8.89□□□□□ -0.99
RPAIN-217ENST00000575711 LGALS3P17931 250 aaKnown RBP8.89□□□□□ -0.99
RPAIN-217ENST00000575711 STPG4Q8N801 248 aa8.89□□□□□ -0.99
RPAIN-217ENST00000575711 NDUFA12Q9UI09 145 aa8.89□□□□□ -0.99
RPAIN-217ENST00000575711 A0A087WYN8 130 aa8.88□□□□□ -0.99
RPAIN-217ENST00000575711 MYMXA0A1B0GTQ4 84 aa8.88□□□□□ -0.99
RPAIN-217ENST00000575711 TSPEAR-AS2P59090 65 aa8.88□□□□□ -0.99
RPAIN-217ENST00000575711 HERV-K104P63124 156 aa8.88□□□□□ -0.99
RPAIN-217ENST00000575711 ATOH7Q8N100 152 aa8.88□□□□□ -0.99
RPAIN-217ENST00000575711 ERG28Q9UKR5 140 aa8.88□□□□□ -0.99
RPAIN-217ENST00000575711 NMUP48645 174 aa8.87□□□□□ -0.99
RPAIN-217ENST00000575711 PLAC8Q9NZF1 115 aa8.87□□□□□ -0.99
RPAIN-217ENST00000575711 KIAA1109Q2LD37 5005 aa8.87□□□□□ -0.99
RPAIN-217ENST00000575711 RYR1P21817 5038 aa8.87□□□□□ -0.99
RPAIN-217ENST00000575711 PFN2P35080 140 aa8.86□□□□□ -0.99
RPAIN-217ENST00000575711 COX17Q14061 63 aa8.86□□□□□ -0.99
RPAIN-217ENST00000575711 HSPG2P98160 4391 aa8.85□□□□□ -0.99
RPAIN-217ENST00000575711 SCGB1D1O95968 90 aa8.85□□□□□ -0.99
RPAIN-217ENST00000575711 MEIG1Q5JSS6 88 aa8.85□□□□□ -0.99
RPAIN-217ENST00000575711 LINC00587B1AMM8 73 aa8.84□□□□□ -0.99
RPAIN-217ENST00000575711 SMR3BP02814 79 aaPredicted RBP8.84□□□□□ -0.99
RPAIN-217ENST00000575711 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
RPAIN-217ENST00000575711 A0A1W2PNN7 141 aa8.83□□□□□ -1
RPAIN-217ENST00000575711 HSBP1L1C9JCN9 74 aa8.83□□□□□ -1
RPAIN-217ENST00000575711 LINC00158P58513 81 aa8.83□□□□□ -1
RPAIN-217ENST00000575711 C9orf129Q5T035 196 aaKnown RBP8.83□□□□□ -1
RPAIN-217ENST00000575711 IGKV2D-26A0A0A0MRZ7 120 aa8.82□□□□□ -1
RPAIN-217ENST00000575711 ANKRD39Q53RE8 183 aa8.82□□□□□ -1
RPAIN-217ENST00000575711 A0A0U1RRA0 63 aa8.81□□□□□ -1
RPAIN-217ENST00000575711 FAM168BA1KXE4 195 aa8.81□□□□□ -1
RPAIN-217ENST00000575711 J3QL48 77 aa8.81□□□□□ -1
RPAIN-217ENST00000575711 SMIM13P0DJ93 91 aa8.81□□□□□ -1
RPAIN-217ENST00000575711 FAM19A5Q7Z5A7 132 aaPredicted RBP8.81□□□□□ -1
RPAIN-217ENST00000575711 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
RPAIN-217ENST00000575711 ZNF815PA8K554 130 aa8.8□□□□□ -1
RPAIN-217ENST00000575711 EPM2AB3EWF7 344 aa8.8□□□□□ -1
RPAIN-217ENST00000575711 FAM229AH3BQW9 127 aa8.8□□□□□ -1
RPAIN-217ENST00000575711 Q8N1X5 172 aa8.8□□□□□ -1
RPAIN-217ENST00000575711 SND1-IT1Q9HBX3 110 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms