RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
NDE1-210ENST00000574163 KRTAP10-4P60372 401 aaPredicted RBP6.19□□□□□ -1.42
NDE1-210ENST00000574163 MAJINQ3KP22 176 aa6.19□□□□□ -1.42
NDE1-210ENST00000574163 PDZD11Q5EBL8 140 aa6.19□□□□□ -1.42
NDE1-210ENST00000574163 Q8IZM0 81 aa6.19□□□□□ -1.42
NDE1-210ENST00000574163 PACRGQ96M98 296 aaPredicted RBP6.19□□□□□ -1.42
NDE1-210ENST00000574163 CDKN2A-AS1Q9UH64 79 aa6.19□□□□□ -1.42
NDE1-210ENST00000574163 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
NDE1-210ENST00000574163 PRSS2P07478 247 aa6.18□□□□□ -1.42
NDE1-210ENST00000574163 CXCL5P42830 114 aa6.18□□□□□ -1.42
NDE1-210ENST00000574163 RPL37AP61513 92 aaKnown RBP6.18□□□□□ -1.42
NDE1-210ENST00000574163 LINC00469Q8N7U9 141 aa6.18□□□□□ -1.42
NDE1-210ENST00000574163 STPG4Q8N801 248 aa6.18□□□□□ -1.42
NDE1-210ENST00000574163 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
NDE1-210ENST00000574163 IGLC3P0DOY3 106 aa6.17□□□□□ -1.42
NDE1-210ENST00000574163 UNQ6190/PRO20217Q6UXQ8 127 aa6.17□□□□□ -1.42
NDE1-210ENST00000574163 C7orf33Q8WU49 177 aa6.17□□□□□ -1.42
NDE1-210ENST00000574163 DPH3Q96FX2 82 aa6.17□□□□□ -1.42
NDE1-210ENST00000574163 C6orf48Q9UBA6 75 aa6.17□□□□□ -1.42
NDE1-210ENST00000574163 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
NDE1-210ENST00000574163 H3BRM9 83 aa6.16□□□□□ -1.42
NDE1-210ENST00000574163 TRGC2P03986 189 aa6.16□□□□□ -1.42
NDE1-210ENST00000574163 RPL18AQ02543 176 aaKnown RBP6.16□□□□□ -1.42
NDE1-210ENST00000574163 GAGE2BQ13066 116 aa6.16□□□□□ -1.42
NDE1-210ENST00000574163 PMCHL1Q16048 86 aa6.16□□□□□ -1.42
NDE1-210ENST00000574163 C10orf25Q5T742 122 aa6.16□□□□□ -1.42
NDE1-210ENST00000574163 COLCA2A8K830 154 aa6.15□□□□□ -1.42
NDE1-210ENST00000574163 F8VRH5 84 aa6.15□□□□□ -1.42
NDE1-210ENST00000574163 CKS1BP61024 79 aa6.15□□□□□ -1.42
NDE1-210ENST00000574163 C2orf82Q6UX34 121 aa6.15□□□□□ -1.42
NDE1-210ENST00000574163 BAGE3Q86Y29 109 aa6.15□□□□□ -1.42
NDE1-210ENST00000574163 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.42
NDE1-210ENST00000574163 TRAV12-1A0A0B4J245 112 aa6.14□□□□□ -1.43
NDE1-210ENST00000574163 NDUFC2-KCTD14E9PQ53 114 aa6.14□□□□□ -1.43
NDE1-210ENST00000574163 HSBP1O75506 76 aa6.14□□□□□ -1.43
NDE1-210ENST00000574163 C6orf226Q5I0X4 101 aa6.14□□□□□ -1.43
NDE1-210ENST00000574163 IFI27L1Q96BM0 104 aa6.14□□□□□ -1.43
NDE1-210ENST00000574163 IGLV5-39A0A0G2JS06 123 aa6.13□□□□□ -1.43
NDE1-210ENST00000574163 ZNF22P17026 224 aaPredicted RBP6.13□□□□□ -1.43
NDE1-210ENST00000574163 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
NDE1-210ENST00000574163 Q6ZRP5 223 aa6.13□□□□□ -1.43
NDE1-210ENST00000574163 COX7B2Q8TF08 81 aa6.13□□□□□ -1.43
NDE1-210ENST00000574163 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
NDE1-210ENST00000574163 SERF1AO75920 110 aa6.12□□□□□ -1.43
NDE1-210ENST00000574163 SPINK8P0C7L1 97 aa6.12□□□□□ -1.43
NDE1-210ENST00000574163 NDUFA6P56556 154 aa6.12□□□□□ -1.43
NDE1-210ENST00000574163 LINC00310P59036 64 aa6.12□□□□□ -1.43
NDE1-210ENST00000574163 PRR3P79522 188 aaKnown RBP6.12□□□□□ -1.43
NDE1-210ENST00000574163 ODF1Q14990 250 aa6.12□□□□□ -1.43
NDE1-210ENST00000574163 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
NDE1-210ENST00000574163 C11orf86A6NJI1 115 aa6.11□□□□□ -1.43
NDE1-210ENST00000574163 SFTA2Q6UW10 78 aa6.11□□□□□ -1.43
NDE1-210ENST00000574163 CHTOPQ9Y3Y2 248 aaKnown RBP6.1□□□□□ -1.43
NDE1-210ENST00000574163 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
NDE1-210ENST00000574163 SCO1O75880 301 aa6.09□□□□□ -1.43
NDE1-210ENST00000574163 LEPROTL1O95214 131 aa6.09□□□□□ -1.43
NDE1-210ENST00000574163 GAGE2EQ4V326 116 aa6.09□□□□□ -1.43
NDE1-210ENST00000574163 FAM19A2Q8N3H0 131 aa6.09□□□□□ -1.43
NDE1-210ENST00000574163 GAGE2DQ9UEU5 116 aa6.09□□□□□ -1.43
NDE1-210ENST00000574163 HSPB8Q9UJY1 196 aa6.09□□□□□ -1.43
NDE1-210ENST00000574163 OXTP01178 125 aa6.08□□□□□ -1.44
NDE1-210ENST00000574163 HNRNPA3P51991 378 aaKnown RBP6.08□□□□□ -1.44
NDE1-210ENST00000574163 TMEM170BQ5T4T1 132 aa6.08□□□□□ -1.44
NDE1-210ENST00000574163 M0QXV9 152 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST1H2BKO60814 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST1H2BJP06899 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST1H2BOP23527 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST1H2BBP33778 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST1H2BDP58876 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST1H2BCP62807 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST2H2BEQ16778 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.07□□□□□ -1.44
NDE1-210ENST00000574163 C9orf129Q5T035 196 aaKnown RBP6.07□□□□□ -1.44
NDE1-210ENST00000574163 FAM19A5Q7Z5A7 132 aaPredicted RBP6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST1H2BHQ93079 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST1H2BNQ99877 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 HIST1H2BMQ99879 126 aa6.07□□□□□ -1.44
NDE1-210ENST00000574163 TMEM223A0PJW6 202 aa6.06□□□□□ -1.44
NDE1-210ENST00000574163 FAM168BA1KXE4 195 aa6.06□□□□□ -1.44
NDE1-210ENST00000574163 PLNP26678 52 aa6.06□□□□□ -1.44
NDE1-210ENST00000574163 KRTAP7-1Q8IUC3 87 aa6.06□□□□□ -1.44
NDE1-210ENST00000574163 TP73-AS1Q9UF72 201 aa6.06□□□□□ -1.44
NDE1-210ENST00000574163 NUPR1O60356 82 aa6.05□□□□□ -1.44
NDE1-210ENST00000574163 S100A1P23297 94 aa6.05□□□□□ -1.44
NDE1-210ENST00000574163 COX17Q14061 63 aa6.05□□□□□ -1.44
NDE1-210ENST00000574163 PHF5AQ7RTV0 110 aaKnown RBP6.05□□□□□ -1.44
NDE1-210ENST00000574163 ZNF625Q96I27 306 aaPredicted RBP6.05□□□□□ -1.44
NDE1-210ENST00000574163 PSORS1C2Q9UIG4 136 aa6.05□□□□□ -1.44
NDE1-210ENST00000574163 COA6Q5JTJ3 125 aaKnown RBP6.04□□□□□ -1.44
NDE1-210ENST00000574163 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
NDE1-210ENST00000574163 ERG28Q9UKR5 140 aa6.04□□□□□ -1.44
NDE1-210ENST00000574163 IGLV5-37A0A075B6J1 123 aa6.03□□□□□ -1.44
NDE1-210ENST00000574163 H0Y8G0 127 aa6.03□□□□□ -1.44
NDE1-210ENST00000574163 DPM2O94777 84 aa6.03□□□□□ -1.44
NDE1-210ENST00000574163 FABP4P15090 132 aa6.03□□□□□ -1.44
NDE1-210ENST00000574163 LBHQ53QV2 105 aaPredicted RBP6.03□□□□□ -1.44
NDE1-210ENST00000574163 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
NDE1-210ENST00000574163 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
NDE1-210ENST00000574163 MAP1LC3CQ9BXW4 147 aa6.03□□□□□ -1.44
NDE1-210ENST00000574163 HERV-K104P63124 156 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms