RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 MDFIQ99750 246 aa6.87□□□□□ -1.31
USP6-204ENST00000572949 TSHBP01222 138 aa6.86□□□□□ -1.31
USP6-204ENST00000572949 EDN2P20800 178 aa6.86□□□□□ -1.31
USP6-204ENST00000572949 MRPS36P82909 103 aaKnown RBP6.86□□□□□ -1.31
USP6-204ENST00000572949 TIMM17BO60830 172 aa6.86□□□□□ -1.31
USP6-204ENST00000572949 ANKRD11Q6UB99 2663 aaPredicted RBP6.86□□□□□ -1.31
USP6-204ENST00000572949 FLG2Q5D862 2391 aaPredicted RBP6.86□□□□□ -1.31
USP6-204ENST00000572949 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
USP6-204ENST00000572949 C7orf65Q6ZTY9 151 aa6.86□□□□□ -1.31
USP6-204ENST00000572949 IGLV1-40P01703 118 aa6.85□□□□□ -1.31
USP6-204ENST00000572949 P0C879 139 aa6.85□□□□□ -1.31
USP6-204ENST00000572949 C9orf116Q5BN46 136 aaPredicted RBP6.85□□□□□ -1.31
USP6-204ENST00000572949 IGLV1-51P01701 117 aa6.85□□□□□ -1.31
USP6-204ENST00000572949 RNASE8Q8TDE3 154 aaKnown RBP6.85□□□□□ -1.31
USP6-204ENST00000572949 PRLHP81277 87 aa6.85□□□□□ -1.31
USP6-204ENST00000572949 PCOTHQ58A44 107 aa6.85□□□□□ -1.31
USP6-204ENST00000572949 CDC42SE2Q9NRR3 84 aa6.84□□□□□ -1.31
USP6-204ENST00000572949 TRBV10-3A0A0K0K1G6 114 aa6.84□□□□□ -1.31
USP6-204ENST00000572949 CSDC2Q9Y534 153 aaKnown RBP6.83□□□□□ -1.32
USP6-204ENST00000572949 FHL3Q13643 280 aa6.83□□□□□ -1.32
USP6-204ENST00000572949 MT-ATP8P03928 68 aa6.83□□□□□ -1.32
USP6-204ENST00000572949 RNASE3P12724 160 aaKnown RBP6.83□□□□□ -1.32
USP6-204ENST00000572949 C16orf95Q9H693 158 aa6.83□□□□□ -1.32
USP6-204ENST00000572949 PKD1L2Q7Z442 2459 aa6.83□□□□□ -1.32
USP6-204ENST00000572949 F8WDY8 70 aa6.83□□□□□ -1.32
USP6-204ENST00000572949 KLLNB2CW77 178 aa6.82□□□□□ -1.32
USP6-204ENST00000572949 DEFB116Q30KQ4 102 aa6.81□□□□□ -1.32
USP6-204ENST00000572949 C1orf229Q6ZS94 237 aaPredicted RBP6.81□□□□□ -1.32
USP6-204ENST00000572949 A0A087WSZ3 146 aa6.81□□□□□ -1.32
USP6-204ENST00000572949 AVPP01185 164 aa6.81□□□□□ -1.32
USP6-204ENST00000572949 NTM-AS1Q6ZSK4 140 aa6.81□□□□□ -1.32
USP6-204ENST00000572949 CENPFP49454 3210 aa6.81□□□□□ -1.32
USP6-204ENST00000572949 H0Y9P7 68 aa6.8□□□□□ -1.32
USP6-204ENST00000572949 ODF3L2Q3SX64 289 aa6.8□□□□□ -1.32
USP6-204ENST00000572949 CRIP1P50238 77 aa6.8□□□□□ -1.32
USP6-204ENST00000572949 COL4A3Q01955 1670 aa6.8□□□□□ -1.32
USP6-204ENST00000572949 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
USP6-204ENST00000572949 LYPD5Q6UWN5 251 aa6.8□□□□□ -1.32
USP6-204ENST00000572949 FASNP49327 2511 aaKnown RBP6.79□□□□□ -1.32
USP6-204ENST00000572949 HCG22E2RYF7 251 aa6.79□□□□□ -1.32
USP6-204ENST00000572949 Q8N2B8 174 aa6.79□□□□□ -1.32
USP6-204ENST00000572949 LINC00575Q6W349 94 aa6.79□□□□□ -1.32
USP6-204ENST00000572949 Q8N6K4 173 aa6.78□□□□□ -1.32
USP6-204ENST00000572949 PRR3P79522 188 aaKnown RBP6.78□□□□□ -1.32
USP6-204ENST00000572949 Q8N814 137 aa6.78□□□□□ -1.32
USP6-204ENST00000572949 POLQO75417 2590 aa6.78□□□□□ -1.32
USP6-204ENST00000572949 FHL2Q14192 279 aa6.78□□□□□ -1.32
USP6-204ENST00000572949 CDSNQ15517 529 aa6.78□□□□□ -1.32
USP6-204ENST00000572949 MOBPQ13875 183 aa6.77□□□□□ -1.33
USP6-204ENST00000572949 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
USP6-204ENST00000572949 PRR9Q5T870 116 aa6.77□□□□□ -1.33
USP6-204ENST00000572949 MAPKAPK5-AS1Q8N8E1 139 aa6.77□□□□□ -1.33
USP6-204ENST00000572949 NRACQ8N912 160 aa6.77□□□□□ -1.33
USP6-204ENST00000572949 MRPS12O15235 138 aaKnown RBP6.76□□□□□ -1.33
USP6-204ENST00000572949 ACYP2P14621 99 aa6.76□□□□□ -1.33
USP6-204ENST00000572949 IGLV4-60A0A075B6I1 120 aa6.75□□□□□ -1.33
USP6-204ENST00000572949 BEAN1Q3B7T3 259 aa6.75□□□□□ -1.33
USP6-204ENST00000572949 MTORP42345 2549 aa6.75□□□□□ -1.33
USP6-204ENST00000572949 WWC2-AS2Q96NR7 200 aa6.75□□□□□ -1.33
USP6-204ENST00000572949 PMAIP1Q13794 54 aa6.75□□□□□ -1.33
USP6-204ENST00000572949 SMCR5Q8TEV8 140 aa6.74□□□□□ -1.33
USP6-204ENST00000572949 USP24Q9UPU5 2620 aa6.74□□□□□ -1.33
USP6-204ENST00000572949 CRYGAP11844 174 aa6.74□□□□□ -1.33
USP6-204ENST00000572949 USP9YO00507 2555 aaPredicted RBP6.74□□□□□ -1.33
USP6-204ENST00000572949 BPTFQ12830 3046 aa6.74□□□□□ -1.33
USP6-204ENST00000572949 YPEL4Q96NS1 127 aa6.74□□□□□ -1.33
USP6-204ENST00000572949 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
USP6-204ENST00000572949 CRIP2P52943 208 aaPredicted RBP6.74□□□□□ -1.33
USP6-204ENST00000572949 C11orf1Q9H5F2 150 aa6.73□□□□□ -1.33
USP6-204ENST00000572949 C22orf24Q9Y442 160 aa6.73□□□□□ -1.33
USP6-204ENST00000572949 LINC00242Q5T6M2 205 aa6.73□□□□□ -1.33
USP6-204ENST00000572949 PRO3102Q9H379 93 aa6.73□□□□□ -1.33
USP6-204ENST00000572949 POLR2KP53803 58 aaKnown RBP6.73□□□□□ -1.33
USP6-204ENST00000572949 TRAV7A0A075B6U4 112 aa6.72□□□□□ -1.33
USP6-204ENST00000572949 CHD8Q9HCK8 2581 aa6.72□□□□□ -1.33
USP6-204ENST00000572949 Q6ZRP5 223 aa6.72□□□□□ -1.33
USP6-204ENST00000572949 Q6ZRU5 148 aa6.72□□□□□ -1.33
USP6-204ENST00000572949 RTL8CO15255 209 aa6.72□□□□□ -1.33
USP6-204ENST00000572949 TRBV7-7A0A0K0K1E9 115 aa6.72□□□□□ -1.33
USP6-204ENST00000572949 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.33
USP6-204ENST00000572949 BRWD1-AS2P59051 145 aa6.71□□□□□ -1.34
USP6-204ENST00000572949 EP400Q96L91 3159 aa6.71□□□□□ -1.34
USP6-204ENST00000572949 A0A1B0GUV1 79 aa6.71□□□□□ -1.34
USP6-204ENST00000572949 PRRC2CQ9Y520 2896 aaKnown RBP6.71□□□□□ -1.34
USP6-204ENST00000572949 LINC00313P59037 77 aa6.71□□□□□ -1.34
USP6-204ENST00000572949 TP73-AS1Q9UF72 201 aa6.7□□□□□ -1.34
USP6-204ENST00000572949 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
USP6-204ENST00000572949 A0A1B0GU69 56 aa6.7□□□□□ -1.34
USP6-204ENST00000572949 SMIM1B2RUZ4 78 aa6.7□□□□□ -1.34
USP6-204ENST00000572949 CHTF8P0CG12 524 aa6.7□□□□□ -1.34
USP6-204ENST00000572949 C11orf21Q9P2W6 132 aa6.69□□□□□ -1.34
USP6-204ENST00000572949 LINC00694P0DN24 101 aa6.69□□□□□ -1.34
USP6-204ENST00000572949 SOSTDC1Q6X4U4 206 aa6.69□□□□□ -1.34
USP6-204ENST00000572949 ZNF295-AS1Q8N0V1 137 aa6.69□□□□□ -1.34
USP6-204ENST00000572949 COX7CP15954 63 aa6.69□□□□□ -1.34
USP6-204ENST00000572949 CDIP1Q9H305 208 aa6.69□□□□□ -1.34
USP6-204ENST00000572949 C1orf64Q8NEQ6 169 aa6.69□□□□□ -1.34
USP6-204ENST00000572949 PSPHP1O15172 72 aa6.69□□□□□ -1.34
USP6-204ENST00000572949 EIF4EBP1Q13541 118 aaPredicted RBP6.68□□□□□ -1.34
USP6-204ENST00000572949 A0A087WYN8 130 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms