RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 TMEM223A0PJW6 202 aa14.14□□□□□ -0.15
RAB40B-207ENST00000572603 S100A6P06703 90 aa14.14□□□□□ -0.15
RAB40B-207ENST00000572603 PRSS2P07478 247 aa14.14□□□□□ -0.15
RAB40B-207ENST00000572603 C6orf48Q9UBA6 75 aa14.14□□□□□ -0.15
RAB40B-207ENST00000572603 HERC2O95714 4834 aa14.13□□□□□ -0.15
RAB40B-207ENST00000572603 CDK2AP2O75956 126 aa14.13□□□□□ -0.15
RAB40B-207ENST00000572603 PLNP26678 52 aa14.13□□□□□ -0.15
RAB40B-207ENST00000572603 RNF151Q2KHN1 245 aa14.13□□□□□ -0.15
RAB40B-207ENST00000572603 LINC01545Q5VT33 79 aa14.13□□□□□ -0.15
RAB40B-207ENST00000572603 HIST1H2BLQ99880 126 aa14.13□□□□□ -0.15
RAB40B-207ENST00000572603 PANO1I0J062 215 aa14.12□□□□□ -0.15
RAB40B-207ENST00000572603 DPM2O94777 84 aa14.12□□□□□ -0.15
RAB40B-207ENST00000572603 PET117Q6UWS5 81 aa14.12□□□□□ -0.15
RAB40B-207ENST00000572603 C5orf52A6NGY3 159 aa14.11□□□□□ -0.15
RAB40B-207ENST00000572603 XGP55808 180 aa14.11□□□□□ -0.15
RAB40B-207ENST00000572603 SNRPEP62304 92 aaKnown RBP14.11□□□□□ -0.15
RAB40B-207ENST00000572603 C6orf226Q5I0X4 101 aa14.11□□□□□ -0.15
RAB40B-207ENST00000572603 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.11□□□□□ -0.15
RAB40B-207ENST00000572603 IGKCP01834 107 aa14.1□□□□□ -0.15
RAB40B-207ENST00000572603 CHTF8P0CG12 524 aa14.1□□□□□ -0.15
RAB40B-207ENST00000572603 CXCL5P42830 114 aa14.1□□□□□ -0.15
RAB40B-207ENST00000572603 KRTDAPP60985 99 aa14.1□□□□□ -0.15
RAB40B-207ENST00000572603 CIRBPQ14011 172 aaKnown RBP14.1□□□□□ -0.15
RAB40B-207ENST00000572603 A0A096LNI7 61 aa14.09□□□□□ -0.15
RAB40B-207ENST00000572603 TRBV30A0A0K0K1B3 111 aa14.09□□□□□ -0.15
RAB40B-207ENST00000572603 CKS1BP61024 79 aa14.09□□□□□ -0.15
RAB40B-207ENST00000572603 HAMPP81172 84 aa14.09□□□□□ -0.15
RAB40B-207ENST00000572603 S100A2P29034 98 aa14.08□□□□□ -0.16
RAB40B-207ENST00000572603 LOC107984640A0A0U1RRK4 108 aa14.06□□□□□ -0.16
RAB40B-207ENST00000572603 SPACA4Q8TDM5 124 aa14.06□□□□□ -0.16
RAB40B-207ENST00000572603 TLX1NBP0CAT3 122 aa14.05□□□□□ -0.16
RAB40B-207ENST00000572603 C9orf116Q5BN46 136 aaPredicted RBP14.05□□□□□ -0.16
RAB40B-207ENST00000572603 SCXQ7RTU7 201 aa14.05□□□□□ -0.16
RAB40B-207ENST00000572603 PKIGQ9Y2B9 76 aa14.05□□□□□ -0.16
RAB40B-207ENST00000572603 IGKV2-24A0A0C4DH68 120 aa14.03□□□□□ -0.16
RAB40B-207ENST00000572603 PTTG1IPP53801 180 aa14.03□□□□□ -0.16
RAB40B-207ENST00000572603 FAT1Q14517 4588 aa14.03□□□□□ -0.16
RAB40B-207ENST00000572603 TSPEAR-AS2P59090 65 aa14.02□□□□□ -0.17
RAB40B-207ENST00000572603 RPL18AQ02543 176 aaKnown RBP14.02□□□□□ -0.17
RAB40B-207ENST00000572603 Q6ZRP5 223 aa14.02□□□□□ -0.17
RAB40B-207ENST00000572603 ZNF625Q96I27 306 aaPredicted RBP14.02□□□□□ -0.17
RAB40B-207ENST00000572603 CIRBP-AS1Q8TBR5 109 aa14.01□□□□□ -0.17
RAB40B-207ENST00000572603 GAGE2BQ13066 116 aa14□□□□□ -0.17
RAB40B-207ENST00000572603 KRTAP17-1Q9BYP8 105 aa14□□□□□ -0.17
RAB40B-207ENST00000572603 C20orf202A1L168 122 aa13.99□□□□□ -0.17
RAB40B-207ENST00000572603 NDUFC2-KCTD14E9PQ53 114 aa13.99□□□□□ -0.17
RAB40B-207ENST00000572603 LEPROTO15243 131 aa13.99□□□□□ -0.17
RAB40B-207ENST00000572603 HERVK_113P61574 105 aa13.99□□□□□ -0.17
RAB40B-207ENST00000572603 MAJINQ3KP22 176 aa13.98□□□□□ -0.17
RAB40B-207ENST00000572603 A0A087WYN8 130 aa13.97□□□□□ -0.17
RAB40B-207ENST00000572603 TMA7Q9Y2S6 64 aaKnown RBP13.97□□□□□ -0.17
RAB40B-207ENST00000572603 E9PLD3 99 aa13.96□□□□□ -0.17
RAB40B-207ENST00000572603 SFTA2Q6UW10 78 aa13.96□□□□□ -0.17
RAB40B-207ENST00000572603 PLEKHB2Q96CS7 222 aa13.96□□□□□ -0.17
RAB40B-207ENST00000572603 PLAC8Q9NZF1 115 aa13.96□□□□□ -0.17
RAB40B-207ENST00000572603 LINC00474Q9P2X8 69 aa13.96□□□□□ -0.17
RAB40B-207ENST00000572603 VPS13BQ7Z7G8 4022 aa13.95□□□□□ -0.18
RAB40B-207ENST00000572603 STPG4Q8N801 248 aa13.95□□□□□ -0.18
RAB40B-207ENST00000572603 J3QQQ9 107 aa13.94□□□□□ -0.18
RAB40B-207ENST00000572603 GAGE2EQ4V326 116 aa13.94□□□□□ -0.18
RAB40B-207ENST00000572603 GAGE2DQ9UEU5 116 aa13.94□□□□□ -0.18
RAB40B-207ENST00000572603 EPM2AB3EWF7 344 aa13.93□□□□□ -0.18
RAB40B-207ENST00000572603 ATOH7Q8N100 152 aa13.93□□□□□ -0.18
RAB40B-207ENST00000572603 NDUFA12Q9UI09 145 aa13.93□□□□□ -0.18
RAB40B-207ENST00000572603 ERG28Q9UKR5 140 aa13.93□□□□□ -0.18
RAB40B-207ENST00000572603 C9orf129Q5T035 196 aaKnown RBP13.92□□□□□ -0.18
RAB40B-207ENST00000572603 IGKV2D-26A0A0A0MRZ7 120 aa13.91□□□□□ -0.18
RAB40B-207ENST00000572603 A0A1W2PNN7 141 aa13.9□□□□□ -0.18
RAB40B-207ENST00000572603 SMR3BP02814 79 aaPredicted RBP13.9□□□□□ -0.18
RAB40B-207ENST00000572603 LGALS3P17931 250 aaKnown RBP13.89□□□□□ -0.19
RAB40B-207ENST00000572603 PFN2P35080 140 aa13.89□□□□□ -0.19
RAB40B-207ENST00000572603 AKR1D1P51857 326 aa13.89□□□□□ -0.19
RAB40B-207ENST00000572603 ANKRD39Q53RE8 183 aa13.89□□□□□ -0.19
RAB40B-207ENST00000572603 KRTAP7-1Q8IUC3 87 aa13.89□□□□□ -0.19
RAB40B-207ENST00000572603 MYMXA0A1B0GTQ4 84 aa13.88□□□□□ -0.19
RAB40B-207ENST00000572603 FAM168BA1KXE4 195 aa13.88□□□□□ -0.19
RAB40B-207ENST00000572603 NMUP48645 174 aa13.88□□□□□ -0.19
RAB40B-207ENST00000572603 HERV-K104P63124 156 aa13.88□□□□□ -0.19
RAB40B-207ENST00000572603 DPH3Q96FX2 82 aa13.88□□□□□ -0.19
RAB40B-207ENST00000572603 XAGE1AQ9HD64 81 aa13.88□□□□□ -0.19
RAB40B-207ENST00000572603 COX17Q14061 63 aa13.87□□□□□ -0.19
RAB40B-207ENST00000572603 Q8N1X5 172 aa13.87□□□□□ -0.19
RAB40B-207ENST00000572603 LINC00528Q8N1L1 170 aa13.85□□□□□ -0.19
RAB40B-207ENST00000572603 SMIM13P0DJ93 91 aa13.84□□□□□ -0.19
RAB40B-207ENST00000572603 SERTAD4-AS1Q5TG53 156 aa13.83□□□□□ -0.2
RAB40B-207ENST00000572603 FAM19A5Q7Z5A7 132 aaPredicted RBP13.83□□□□□ -0.2
RAB40B-207ENST00000572603 TTTY13Q9BZ97 58 aa13.83□□□□□ -0.2
RAB40B-207ENST00000572603 A0A0U1RRA0 63 aa13.82□□□□□ -0.2
RAB40B-207ENST00000572603 SCGB1D1O95968 90 aa13.82□□□□□ -0.2
RAB40B-207ENST00000572603 MEIG1Q5JSS6 88 aa13.82□□□□□ -0.2
RAB40B-207ENST00000572603 SND1-IT1Q9HBX3 110 aa13.82□□□□□ -0.2
RAB40B-207ENST00000572603 LINC00158P58513 81 aa13.81□□□□□ -0.2
RAB40B-207ENST00000572603 A0A0J9YXY3 114 aa13.8□□□□□ -0.2
RAB40B-207ENST00000572603 Q5VSD8 79 aa13.8□□□□□ -0.2
RAB40B-207ENST00000572603 ABCA13Q86UQ4 5058 aa13.79□□□□□ -0.2
RAB40B-207ENST00000572603 PKHD1L1Q86WI1 4243 aa13.79□□□□□ -0.2
RAB40B-207ENST00000572603 KRTAP4-5Q9BYR2 181 aa13.79□□□□□ -0.2
RAB40B-207ENST00000572603 ZNF815PA8K554 130 aa13.78□□□□□ -0.2
RAB40B-207ENST00000572603 KRTAP10-4P60372 401 aaPredicted RBP13.78□□□□□ -0.2
RAB40B-207ENST00000572603 PHF5AQ7RTV0 110 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms