RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 Q8IZM0 81 aa6.16□□□□□ -1.42
NPLOC4-208ENST00000572351 COX7B2Q8TF08 81 aa6.16□□□□□ -1.42
NPLOC4-208ENST00000572351 C2orf48Q96LS8 159 aa6.16□□□□□ -1.42
NPLOC4-208ENST00000572351 CARD19Q96LW7 228 aa6.16□□□□□ -1.42
NPLOC4-208ENST00000572351 TMEM223A0PJW6 202 aa6.15□□□□□ -1.42
NPLOC4-208ENST00000572351 F8WDY8 70 aa6.15□□□□□ -1.42
NPLOC4-208ENST00000572351 SCGB1D1O95968 90 aa6.14□□□□□ -1.43
NPLOC4-208ENST00000572351 SLPIP03973 132 aa6.14□□□□□ -1.43
NPLOC4-208ENST00000572351 GCSHP23434 173 aa6.14□□□□□ -1.43
NPLOC4-208ENST00000572351 CXCL5P42830 114 aa6.14□□□□□ -1.43
NPLOC4-208ENST00000572351 KIAA0087Q14695 138 aa6.14□□□□□ -1.43
NPLOC4-208ENST00000572351 C2orf82Q6UX34 121 aa6.14□□□□□ -1.43
NPLOC4-208ENST00000572351 Q6ZRU5 148 aa6.14□□□□□ -1.43
NPLOC4-208ENST00000572351 IGLV5-39A0A0G2JS06 123 aa6.13□□□□□ -1.43
NPLOC4-208ENST00000572351 LINC01620Q4KN68 170 aa6.13□□□□□ -1.43
NPLOC4-208ENST00000572351 ATOH7Q8N100 152 aa6.13□□□□□ -1.43
NPLOC4-208ENST00000572351 PKIGQ9Y2B9 76 aa6.13□□□□□ -1.43
NPLOC4-208ENST00000572351 HSBP1L1C9JCN9 74 aa6.12□□□□□ -1.43
NPLOC4-208ENST00000572351 LGALS3P17931 250 aaKnown RBP6.12□□□□□ -1.43
NPLOC4-208ENST00000572351 SFTA2Q6UW10 78 aa6.12□□□□□ -1.43
NPLOC4-208ENST00000572351 UNQ6190/PRO20217Q6UXQ8 127 aa6.12□□□□□ -1.43
NPLOC4-208ENST00000572351 C9orf163Q8N9P6 203 aa6.12□□□□□ -1.43
NPLOC4-208ENST00000572351 PLEKHB2Q96CS7 222 aa6.12□□□□□ -1.43
NPLOC4-208ENST00000572351 FRAS1Q86XX4 4008 aa6.11□□□□□ -1.43
NPLOC4-208ENST00000572351 TRBV30A0A0K0K1B3 111 aa6.11□□□□□ -1.43
NPLOC4-208ENST00000572351 LEPROTO15243 131 aa6.11□□□□□ -1.43
NPLOC4-208ENST00000572351 RPL18AQ02543 176 aaKnown RBP6.11□□□□□ -1.43
NPLOC4-208ENST00000572351 C10orf25Q5T742 122 aa6.11□□□□□ -1.43
NPLOC4-208ENST00000572351 STPG4Q8N801 248 aa6.11□□□□□ -1.43
NPLOC4-208ENST00000572351 C6orf48Q9UBA6 75 aa6.11□□□□□ -1.43
NPLOC4-208ENST00000572351 DNAH11Q96DT5 4516 aa6.11□□□□□ -1.43
NPLOC4-208ENST00000572351 E9PLD3 99 aa6.1□□□□□ -1.43
NPLOC4-208ENST00000572351 J3QQQ9 107 aa6.1□□□□□ -1.43
NPLOC4-208ENST00000572351 KRTAP10-1P60331 282 aa6.1□□□□□ -1.43
NPLOC4-208ENST00000572351 RNF151Q2KHN1 245 aa6.1□□□□□ -1.43
NPLOC4-208ENST00000572351 NDUFA12Q9UI09 145 aa6.1□□□□□ -1.43
NPLOC4-208ENST00000572351 IGKV2-24A0A0C4DH68 120 aa6.09□□□□□ -1.43
NPLOC4-208ENST00000572351 LOC107984640A0A0U1RRK4 108 aa6.09□□□□□ -1.43
NPLOC4-208ENST00000572351 MYMXA0A1B0GTQ4 84 aa6.09□□□□□ -1.43
NPLOC4-208ENST00000572351 NMUP48645 174 aa6.09□□□□□ -1.43
NPLOC4-208ENST00000572351 GAGE2BQ13066 116 aa6.09□□□□□ -1.43
NPLOC4-208ENST00000572351 DPH3Q96FX2 82 aa6.09□□□□□ -1.43
NPLOC4-208ENST00000572351 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.43
NPLOC4-208ENST00000572351 TSPEAR-AS2P59090 65 aa6.08□□□□□ -1.44
NPLOC4-208ENST00000572351 C9orf116Q5BN46 136 aaPredicted RBP6.08□□□□□ -1.44
NPLOC4-208ENST00000572351 MEIG1Q5JSS6 88 aa6.08□□□□□ -1.44
NPLOC4-208ENST00000572351 NDUFC2-KCTD14E9PQ53 114 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 PFN2P35080 140 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 HERV-K104P63124 156 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 JOSD1Q15040 202 aaPredicted RBP6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 GAGE2EQ4V326 116 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 ANKRD39Q53RE8 183 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 SDIM1Q6ZPB5 146 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 LINC00474Q9P2X8 69 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 GAGE2DQ9UEU5 116 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 ERG28Q9UKR5 140 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 PKD1P98161 4303 aa6.07□□□□□ -1.44
NPLOC4-208ENST00000572351 A0A096LNI7 61 aa6.06□□□□□ -1.44
NPLOC4-208ENST00000572351 IGKV2D-26A0A0A0MRZ7 120 aa6.06□□□□□ -1.44
NPLOC4-208ENST00000572351 LINC00587B1AMM8 73 aa6.06□□□□□ -1.44
NPLOC4-208ENST00000572351 TLX1NBP0CAT3 122 aa6.06□□□□□ -1.44
NPLOC4-208ENST00000572351 CHTF8P0CG12 524 aa6.06□□□□□ -1.44
NPLOC4-208ENST00000572351 LINC00158P58513 81 aa6.06□□□□□ -1.44
NPLOC4-208ENST00000572351 MAJINQ3KP22 176 aa6.06□□□□□ -1.44
NPLOC4-208ENST00000572351 A0A0U1RRA0 63 aa6.05□□□□□ -1.44
NPLOC4-208ENST00000572351 ZNF815PA8K554 130 aa6.05□□□□□ -1.44
NPLOC4-208ENST00000572351 PTTG1IPP53801 180 aa6.05□□□□□ -1.44
NPLOC4-208ENST00000572351 Q6ZRP5 223 aa6.05□□□□□ -1.44
NPLOC4-208ENST00000572351 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
NPLOC4-208ENST00000572351 HECTD4Q9Y4D8 3996 aa6.05□□□□□ -1.44
NPLOC4-208ENST00000572351 DYNC1H1Q14204 4646 aaKnown RBP6.05□□□□□ -1.44
NPLOC4-208ENST00000572351 CIRBPQ14011 172 aaKnown RBP6.04□□□□□ -1.44
NPLOC4-208ENST00000572351 COX17Q14061 63 aa6.04□□□□□ -1.44
NPLOC4-208ENST00000572351 SCGB1D4Q6XE38 83 aa6.04□□□□□ -1.44
NPLOC4-208ENST00000572351 VAMP8Q9BV40 100 aa6.04□□□□□ -1.44
NPLOC4-208ENST00000572351 FAM30AQ9NZY2 134 aa6.04□□□□□ -1.44
NPLOC4-208ENST00000572351 PAM16Q9Y3D7 125 aa6.04□□□□□ -1.44
NPLOC4-208ENST00000572351 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
NPLOC4-208ENST00000572351 DNAH5Q8TE73 4624 aa6.04□□□□□ -1.44
NPLOC4-208ENST00000572351 SMIM13P0DJ93 91 aa6.03□□□□□ -1.44
NPLOC4-208ENST00000572351 PYY3Q5JQD4 70 aa6.03□□□□□ -1.44
NPLOC4-208ENST00000572351 SPACA4Q8TDM5 124 aa6.03□□□□□ -1.44
NPLOC4-208ENST00000572351 TTTY13Q9BZ97 58 aa6.03□□□□□ -1.44
NPLOC4-208ENST00000572351 XAGE1AQ9HD64 81 aa6.03□□□□□ -1.44
NPLOC4-208ENST00000572351 A0A0J9YXY3 114 aa6.02□□□□□ -1.45
NPLOC4-208ENST00000572351 PANO1I0J062 215 aa6.02□□□□□ -1.45
NPLOC4-208ENST00000572351 HAMPP81172 84 aa6.02□□□□□ -1.45
NPLOC4-208ENST00000572351 SPATA45Q537H7 98 aa6.02□□□□□ -1.45
NPLOC4-208ENST00000572351 Q6ZSA8 131 aa6.02□□□□□ -1.45
NPLOC4-208ENST00000572351 SCXQ7RTU7 201 aa6.02□□□□□ -1.45
NPLOC4-208ENST00000572351 PCP2Q8IVA1 136 aa6.02□□□□□ -1.45
NPLOC4-208ENST00000572351 LRP1BQ9NZR2 4599 aa6.01□□□□□ -1.45
NPLOC4-208ENST00000572351 MIR7-3HGQ8N6C7 128 aa6.01□□□□□ -1.45
NPLOC4-208ENST00000572351 SND1-IT1Q9HBX3 110 aa6.01□□□□□ -1.45
NPLOC4-208ENST00000572351 A0A087WYN8 130 aa6□□□□□ -1.45
NPLOC4-208ENST00000572351 CDK2AP2O75956 126 aa6□□□□□ -1.45
NPLOC4-208ENST00000572351 S100A12P80511 92 aa6□□□□□ -1.45
NPLOC4-208ENST00000572351 C9orf129Q5T035 196 aaKnown RBP6□□□□□ -1.45
NPLOC4-208ENST00000572351 FAM19A5Q7Z5A7 132 aaPredicted RBP6□□□□□ -1.45
NPLOC4-208ENST00000572351 CIRBP-AS1Q8TBR5 109 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms