RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NXT2Q9NPJ8 142 aaKnown RBP2.5□□□□□ -2.01
SMG6-208ENST00000570874 CHD6Q8TD26 2715 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 FASNP49327 2511 aaKnown RBP2.49□□□□□ -2.01
SMG6-208ENST00000570874 RPL37AP8A6NKH3 93 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 KRTAP4-16G5E9R7 235 aaPredicted RBP2.49□□□□□ -2.01
SMG6-208ENST00000570874 H3BUA1 57 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 NDUFA4O00483 81 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 PPP1R17O96001 155 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 CRIP1P50238 77 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 TSPEAR-AS2P59090 65 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 KRTAP10-2P60368 255 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 GDF5OSQ5U4N7 250 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 CFAP126Q5VTH2 177 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 SOSTDC1Q6X4U4 206 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 USMG5Q96IX5 58 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 LINC01600Q96MT4 127 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 B9D2Q9BPU9 175 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 CNFNQ9BYD5 112 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 LRRK2Q5S007 2527 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 TLN2Q9Y4G6 2542 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 NAV2Q8IVL1 2488 aa2.49□□□□□ -2.01
SMG6-208ENST00000570874 FLNAP21333 2647 aaKnown RBP2.49□□□□□ -2.01
SMG6-208ENST00000570874 MYO9AB2RTY4 2548 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 IGLV8-61A0A075B6I0 122 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 IGHV7-4-1A0A0J9YVY3 117 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 A6NN06 94 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 IBA57-AS1B1ANH7 110 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 SOCS3O14543 225 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 NDUFC1O43677 76 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 CCKP06307 115 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 FCER1GP30273 86 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 NANOS2P60321 138 aaKnown RBP2.48□□□□□ -2.01
SMG6-208ENST00000570874 KRTAP10-3P60369 221 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 PRR9Q5T870 116 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 CAMK2N1Q7Z7J9 78 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 CLEC2BQ92478 149 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 IFI27L1Q96BM0 104 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 RHPN1-AS1Q9BWJ2 59 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 ZNF580Q9UK33 172 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 LENEPQ9Y5L5 61 aa2.48□□□□□ -2.01
SMG6-208ENST00000570874 IGLV1-50A0A075B6I6 118 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 TMSB15BA0A087X1C1 80 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 TRAV12-1A0A0B4J245 112 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 A0A0J9YXY3 114 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 SMIM1B2RUZ4 78 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 SH2D1AO60880 128 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 IGHV3-30-3P0DP02 117 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 PLNP26678 52 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 Q1T7F1 81 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 MRPL51Q4U2R6 128 aaKnown RBP2.47□□□□□ -2.01
SMG6-208ENST00000570874 ZNF575Q86XF7 245 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 KLHL30-AS1Q8NEE0 82 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 C7orf33Q8WU49 177 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 SLC50A1Q9BRV3 221 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 PHLDA3Q9Y5J5 127 aa2.47□□□□□ -2.01
SMG6-208ENST00000570874 FN1P02751 2386 aaKnown RBP2.46□□□□□ -2.01
SMG6-208ENST00000570874 CCDC168Q8NDH2 2452 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 K7ERS5 55 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 BCE1O60756 84 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 ARMS2P0C7Q2 107 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 RBM3P98179 157 aaKnown RBP2.46□□□□□ -2.02
SMG6-208ENST00000570874 TMEM170BQ5T4T1 132 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 ZFP2Q6ZN57 461 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 C2orf91Q6ZV80 131 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 ZFAND2AQ8N6M9 145 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 LINC01006Q8NI28 216 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 C4orf3Q8WVX3 66 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 ODF3Q96PU9 254 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 MRPL35Q9NZE8 188 aaKnown RBP2.46□□□□□ -2.02
SMG6-208ENST00000570874 DHRS4-AS1Q9P1J3 65 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 ITPR2Q14571 2701 aa2.46□□□□□ -2.02
SMG6-208ENST00000570874 MAP1AP78559 2803 aaPredicted RBP2.45□□□□□ -2.02
SMG6-208ENST00000570874 CREBBPQ92793 2442 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 IGKV3D-20A0A0C4DH25 116 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 D6R8Y8 96 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 IGKV3-20P01619 116 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 IFI27P40305 119 aaPredicted RBP2.45□□□□□ -2.02
SMG6-208ENST00000570874 RHOHQ15669 191 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 SPANXN1Q5VSR9 72 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 LYZL1Q6UWQ5 148 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 C9orf47Q6ZRZ4 202 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 LINC00643Q86TS7 51 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 WWC2-AS2Q96NR7 200 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 LINC00467Q9BRT7 94 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 CHCHD7Q9BUK0 85 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 TTTY13Q9BZ97 58 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 C8orf17Q9NRJ1 99 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 HELZ2Q9BYK8 2649 aaKnown RBP2.45□□□□□ -2.02
SMG6-208ENST00000570874 MXRA5Q9NR99 2828 aa2.45□□□□□ -2.02
SMG6-208ENST00000570874 A0A096LNJ9 63 aa2.44□□□□□ -2.02
SMG6-208ENST00000570874 GAS8-AS1O95177 125 aa2.44□□□□□ -2.02
SMG6-208ENST00000570874 PROK1P58294 105 aa2.44□□□□□ -2.02
SMG6-208ENST00000570874 DEFB131AP59861 70 aa2.44□□□□□ -2.02
SMG6-208ENST00000570874 RNASE13Q5GAN3 156 aaKnown RBP2.44□□□□□ -2.02
SMG6-208ENST00000570874 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
SMG6-208ENST00000570874 NHP2Q9NX24 153 aaKnown RBP2.44□□□□□ -2.02
SMG6-208ENST00000570874 TIMM8BQ9Y5J9 83 aaPredicted RBP2.44□□□□□ -2.02
SMG6-208ENST00000570874 CENPEQ02224 2701 aa2.44□□□□□ -2.02
SMG6-208ENST00000570874 GCN1Q92616 2671 aaKnown RBP2.44□□□□□ -2.02
SMG6-208ENST00000570874 TRBV25-1A0A075B6N4 114 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms