RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ATOH7Q8N100 152 aa9.78□□□□□ -0.84
RAB40B-203ENST00000570676 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.84
RAB40B-203ENST00000570676 LOC105371267A0A1B0GV96 52 aa9.77□□□□□ -0.85
RAB40B-203ENST00000570676 SPINK8P0C7L1 97 aa9.77□□□□□ -0.85
RAB40B-203ENST00000570676 JOSD1Q15040 202 aaPredicted RBP9.77□□□□□ -0.85
RAB40B-203ENST00000570676 LINC01561Q8N1V8 128 aa9.77□□□□□ -0.85
RAB40B-203ENST00000570676 APOMO95445 188 aa9.76□□□□□ -0.85
RAB40B-203ENST00000570676 CIRBP-AS1Q8TBR5 109 aa9.76□□□□□ -0.85
RAB40B-203ENST00000570676 HERC1Q15751 4861 aa9.75□□□□□ -0.85
RAB40B-203ENST00000570676 IGHV1-58A0A0C4DH39 117 aa9.75□□□□□ -0.85
RAB40B-203ENST00000570676 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
RAB40B-203ENST00000570676 SMIM1B2RUZ4 78 aa9.75□□□□□ -0.85
RAB40B-203ENST00000570676 PLA2G1BP04054 148 aaKnown RBP9.75□□□□□ -0.85
RAB40B-203ENST00000570676 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
RAB40B-203ENST00000570676 CFAP161Q6P656 301 aa9.75□□□□□ -0.85
RAB40B-203ENST00000570676 SRRM2Q9UQ35 2752 aaKnown RBP9.75□□□□□ -0.85
RAB40B-203ENST00000570676 IGHV3-64A0A075B6Q5 118 aa9.74□□□□□ -0.85
RAB40B-203ENST00000570676 HERVK_113P61574 105 aa9.74□□□□□ -0.85
RAB40B-203ENST00000570676 PYY3Q5JQD4 70 aa9.74□□□□□ -0.85
RAB40B-203ENST00000570676 C15orf56Q8N910 161 aa9.74□□□□□ -0.85
RAB40B-203ENST00000570676 ORAOV1Q8WV07 137 aa9.74□□□□□ -0.85
RAB40B-203ENST00000570676 STPG4Q8N801 248 aa9.73□□□□□ -0.85
RAB40B-203ENST00000570676 IGLV5-39A0A0G2JS06 123 aa9.72□□□□□ -0.85
RAB40B-203ENST00000570676 hDV102S1A0JD36 115 aa9.72□□□□□ -0.85
RAB40B-203ENST00000570676 HIGD2BQ4VC39 106 aa9.72□□□□□ -0.85
RAB40B-203ENST00000570676 C9orf163Q8N9P6 203 aa9.72□□□□□ -0.85
RAB40B-203ENST00000570676 TOMM7Q9P0U1 55 aa9.72□□□□□ -0.85
RAB40B-203ENST00000570676 SPAG11BQ08648 103 aa9.71□□□□□ -0.86
RAB40B-203ENST00000570676 GVQW2A0A096LPI5 108 aaPredicted RBP9.7□□□□□ -0.86
RAB40B-203ENST00000570676 HSBP1L1C9JCN9 74 aa9.7□□□□□ -0.86
RAB40B-203ENST00000570676 PRSS2P07478 247 aa9.7□□□□□ -0.86
RAB40B-203ENST00000570676 MAJINQ3KP22 176 aa9.7□□□□□ -0.86
RAB40B-203ENST00000570676 COX7B2Q8TF08 81 aa9.7□□□□□ -0.86
RAB40B-203ENST00000570676 E9PLD3 99 aa9.69□□□□□ -0.86
RAB40B-203ENST00000570676 PANO1I0J062 215 aa9.69□□□□□ -0.86
RAB40B-203ENST00000570676 ZNF561-AS1K7EIQ3 104 aa9.69□□□□□ -0.86
RAB40B-203ENST00000570676 LEPROTO15243 131 aa9.69□□□□□ -0.86
RAB40B-203ENST00000570676 CNBPP62633 177 aaKnown RBP9.69□□□□□ -0.86
RAB40B-203ENST00000570676 ANKRD39Q53RE8 183 aa9.69□□□□□ -0.86
RAB40B-203ENST00000570676 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
RAB40B-203ENST00000570676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.69□□□□□ -0.86
RAB40B-203ENST00000570676 KIAA0087Q14695 138 aa9.68□□□□□ -0.86
RAB40B-203ENST00000570676 C6orf226Q5I0X4 101 aa9.68□□□□□ -0.86
RAB40B-203ENST00000570676 Q8IZM0 81 aa9.68□□□□□ -0.86
RAB40B-203ENST00000570676 PLEKHB2Q96CS7 222 aa9.68□□□□□ -0.86
RAB40B-203ENST00000570676 VAMP8Q9BV40 100 aa9.67□□□□□ -0.86
RAB40B-203ENST00000570676 IGKV2D-26A0A0A0MRZ7 120 aa9.66□□□□□ -0.86
RAB40B-203ENST00000570676 KRTAP29-1A8MX34 341 aaPredicted RBP9.66□□□□□ -0.86
RAB40B-203ENST00000570676 J3QQQ9 107 aa9.66□□□□□ -0.86
RAB40B-203ENST00000570676 SLPIP03973 132 aa9.66□□□□□ -0.86
RAB40B-203ENST00000570676 TSPEAR-AS2P59090 65 aa9.66□□□□□ -0.86
RAB40B-203ENST00000570676 SDIM1Q6ZPB5 146 aa9.66□□□□□ -0.86
RAB40B-203ENST00000570676 SMIM6P0DI80 62 aa9.65□□□□□ -0.86
RAB40B-203ENST00000570676 LGALS3P17931 250 aaKnown RBP9.65□□□□□ -0.86
RAB40B-203ENST00000570676 CKS1BP61024 79 aa9.65□□□□□ -0.86
RAB40B-203ENST00000570676 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
RAB40B-203ENST00000570676 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
RAB40B-203ENST00000570676 PAM16Q9Y3D7 125 aa9.65□□□□□ -0.86
RAB40B-203ENST00000570676 J3QL48 77 aa9.64□□□□□ -0.87
RAB40B-203ENST00000570676 NMUP48645 174 aa9.64□□□□□ -0.87
RAB40B-203ENST00000570676 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
RAB40B-203ENST00000570676 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
RAB40B-203ENST00000570676 F8WDY8 70 aa9.63□□□□□ -0.87
RAB40B-203ENST00000570676 NDUFA1O15239 70 aa9.63□□□□□ -0.87
RAB40B-203ENST00000570676 CXCL5P42830 114 aa9.63□□□□□ -0.87
RAB40B-203ENST00000570676 SPATA45Q537H7 98 aa9.63□□□□□ -0.87
RAB40B-203ENST00000570676 NDUFA12Q9UI09 145 aa9.63□□□□□ -0.87
RAB40B-203ENST00000570676 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
RAB40B-203ENST00000570676 S100A12P80511 92 aa9.62□□□□□ -0.87
RAB40B-203ENST00000570676 SYCNQ0VAF6 134 aa9.62□□□□□ -0.87
RAB40B-203ENST00000570676 UNQ6190/PRO20217Q6UXQ8 127 aa9.62□□□□□ -0.87
RAB40B-203ENST00000570676 PKHD1L1Q86WI1 4243 aa9.61□□□□□ -0.87
RAB40B-203ENST00000570676 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
RAB40B-203ENST00000570676 C10orf25Q5T742 122 aa9.61□□□□□ -0.87
RAB40B-203ENST00000570676 SFTA2Q6UW10 78 aa9.61□□□□□ -0.87
RAB40B-203ENST00000570676 Q6ZRU5 148 aa9.61□□□□□ -0.87
RAB40B-203ENST00000570676 ZNF625Q96I27 306 aaPredicted RBP9.61□□□□□ -0.87
RAB40B-203ENST00000570676 CARD19Q96LW7 228 aa9.61□□□□□ -0.87
RAB40B-203ENST00000570676 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
RAB40B-203ENST00000570676 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.6□□□□□ -0.87
RAB40B-203ENST00000570676 MYMXA0A1B0GTQ4 84 aa9.6□□□□□ -0.87
RAB40B-203ENST00000570676 PCP2Q8IVA1 136 aa9.6□□□□□ -0.87
RAB40B-203ENST00000570676 LRP1Q07954 4544 aaKnown RBP9.59□□□□□ -0.87
RAB40B-203ENST00000570676 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
RAB40B-203ENST00000570676 CHTF8P0CG12 524 aa9.59□□□□□ -0.87
RAB40B-203ENST00000570676 SPACA4Q8TDM5 124 aa9.59□□□□□ -0.87
RAB40B-203ENST00000570676 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
RAB40B-203ENST00000570676 HERV-K104P63124 156 aa9.58□□□□□ -0.88
RAB40B-203ENST00000570676 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
RAB40B-203ENST00000570676 FAT3Q8TDW7 4589 aa9.57□□□□□ -0.88
RAB40B-203ENST00000570676 C12orf57Q99622 126 aa9.57□□□□□ -0.88
RAB40B-203ENST00000570676 A0A087WYN8 130 aa9.56□□□□□ -0.88
RAB40B-203ENST00000570676 COX8AP10176 69 aa9.56□□□□□ -0.88
RAB40B-203ENST00000570676 RNF151Q2KHN1 245 aa9.56□□□□□ -0.88
RAB40B-203ENST00000570676 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
RAB40B-203ENST00000570676 C14orf144Q96I85 54 aa9.56□□□□□ -0.88
RAB40B-203ENST00000570676 OXTP01178 125 aa9.55□□□□□ -0.88
RAB40B-203ENST00000570676 MEIG1Q5JSS6 88 aa9.55□□□□□ -0.88
RAB40B-203ENST00000570676 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
RAB40B-203ENST00000570676 ERG28Q9UKR5 140 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms