RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 OR10D4PQ8NGN7 298 aa3.16□□□□□ -1.9
CNOT1-219ENST00000569882 SMIM2Q9BVW6 85 aa3.16□□□□□ -1.9
CNOT1-219ENST00000569882 VPS13DQ5THJ4 4388 aa3.15□□□□□ -1.9
CNOT1-219ENST00000569882 BIRC6Q9NR09 4857 aa3.15□□□□□ -1.9
CNOT1-219ENST00000569882 IGHV1-58A0A0C4DH39 117 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 LINC00959A0A1B0GUT2 108 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 COX7A2LO14548 114 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 ATP5LO75964 103 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 GAS8-AS1O95177 125 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 NPYP01303 97 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 PRSS1P07477 247 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 POLR2KP53803 58 aaKnown RBP3.15□□□□□ -1.91
CNOT1-219ENST00000569882 NRACQ8N912 160 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 SEC11CQ9BY50 192 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 RPS10P5Q9NQ39 176 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 SMCO4Q9NRQ5 59 aa3.15□□□□□ -1.91
CNOT1-219ENST00000569882 TRBV24-1A0A075B6N3 115 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 IGKV2-24A0A0C4DH68 120 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 A0A1B0GXF2 115 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 INAFM2P0DMQ5 153 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 RPL39P62891 51 aaKnown RBP3.14□□□□□ -1.91
CNOT1-219ENST00000569882 RPL24P83731 157 aaKnown RBP3.14□□□□□ -1.91
CNOT1-219ENST00000569882 HSD52Q0P140 79 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 ORMDL2Q53FV1 153 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 PAPPA-AS1Q5QFB9 102 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 TEX43Q6ZNM6 134 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 Q6ZUT4 128 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 HIST3H2BBQ8N257 126 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 PRR26Q8N8Z3 221 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 PRSS3P2Q8NHM4 247 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 CARD19Q96LW7 228 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 IMMP2LQ96T52 175 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 MIEN1Q9BRT3 115 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 CHAC1Q9BUX1 264 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 NXT2Q9NPJ8 142 aaKnown RBP3.14□□□□□ -1.91
CNOT1-219ENST00000569882 CDC42SE2Q9NRR3 84 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 CYSLTR1Q9Y271 337 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 UBE2D4Q9Y2X8 147 aa3.14□□□□□ -1.91
CNOT1-219ENST00000569882 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 PRSS2P07478 247 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 SCXQ7RTU7 201 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 C5orf38Q86SI9 138 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 CBLN2Q8IUK8 224 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 C9orf163Q8N9P6 203 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 C7orf33Q8WU49 177 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 TMEM141Q96I45 108 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 CAMK2N2Q96S95 79 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 TIMM21Q9BVV7 248 aa3.13□□□□□ -1.91
CNOT1-219ENST00000569882 GVQW2A0A096LPI5 108 aaPredicted RBP3.12□□□□□ -1.91
CNOT1-219ENST00000569882 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 C9JAW5 83 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.12□□□□□ -1.91
CNOT1-219ENST00000569882 K7EMI3 77 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 MT-ND6P03923 174 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 ADCYAP1P18509 176 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 NDUFA6P56556 154 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 RPL37AP61513 92 aaKnown RBP3.12□□□□□ -1.91
CNOT1-219ENST00000569882 CNBPP62633 177 aaKnown RBP3.12□□□□□ -1.91
CNOT1-219ENST00000569882 COX6A2Q02221 97 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 RPL18AQ02543 176 aaKnown RBP3.12□□□□□ -1.91
CNOT1-219ENST00000569882 SPAG11BQ08648 103 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 SYCNQ0VAF6 134 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 KIAA1644Q3SXP7 199 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 C2orf66Q6UXQ4 117 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 Q8N8P6 123 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 C15orf56Q8N910 161 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 CIRBP-AS1Q8TBR5 109 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 LINC00526Q96FQ7 95 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 ANAPC13Q9BS18 74 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 LINC00474Q9P2X8 69 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 PKHD1P08F94 4074 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
CNOT1-219ENST00000569882 IGLV4-69A0A075B6H9 119 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 LOC107984640A0A0U1RRK4 108 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 LINC01549A6NIU2 74 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 J3QR89 54 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 NDUFA1O15239 70 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 SEC11AP67812 179 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 GAGE2BQ13066 116 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 GAGE2EQ4V326 116 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 GAGE2AQ6NT46 116 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 KRTAP26-1Q6PEX3 210 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 GTF2H5Q6ZYL4 71 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 SCGB3A1Q96QR1 104 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 OPRPNQ99935 248 aaPredicted RBP3.11□□□□□ -1.91
CNOT1-219ENST00000569882 GNB1LQ9BYB4 327 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 TOMM7Q9P0U1 55 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 GAGE2DQ9UEU5 116 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 TRAPPC1Q9Y5R8 145 aa3.11□□□□□ -1.91
CNOT1-219ENST00000569882 CHTF8P0CG12 524 aa3.1□□□□□ -1.91
CNOT1-219ENST00000569882 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CNOT1-219ENST00000569882 MRPS36P82909 103 aaKnown RBP3.1□□□□□ -1.91
CNOT1-219ENST00000569882 Q6ZSA8 131 aa3.1□□□□□ -1.91
CNOT1-219ENST00000569882 LINC01561Q8N1V8 128 aa3.1□□□□□ -1.91
CNOT1-219ENST00000569882 STPG4Q8N801 248 aa3.1□□□□□ -1.91
CNOT1-219ENST00000569882 PLEKHB2Q96CS7 222 aa3.1□□□□□ -1.91
CNOT1-219ENST00000569882 DNAH10Q8IVF4 4471 aa3.09□□□□□ -1.91
CNOT1-219ENST00000569882 IGLV4-3A0A075B6K6 122 aa3.09□□□□□ -1.91
CNOT1-219ENST00000569882 A0A087WYN8 130 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms