RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 IGHV1-58A0A0C4DH39 117 aa10.12□□□□□ -0.79
SCAMP2-210ENST00000569124 C14orf177Q52M58 125 aa10.12□□□□□ -0.79
SCAMP2-210ENST00000569124 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
SCAMP2-210ENST00000569124 USP17L23D6RBM5 183 aa10.11□□□□□ -0.79
SCAMP2-210ENST00000569124 ZNF22P17026 224 aaPredicted RBP10.11□□□□□ -0.79
SCAMP2-210ENST00000569124 WFDC2Q14508 124 aa10.11□□□□□ -0.79
SCAMP2-210ENST00000569124 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
SCAMP2-210ENST00000569124 LECT2O14960 151 aa10.1□□□□□ -0.79
SCAMP2-210ENST00000569124 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
SCAMP2-210ENST00000569124 SCGB1D1O95968 90 aa10.09□□□□□ -0.79
SCAMP2-210ENST00000569124 HERVK_113P61574 105 aa10.09□□□□□ -0.79
SCAMP2-210ENST00000569124 ORAOV1Q8WV07 137 aa10.09□□□□□ -0.79
SCAMP2-210ENST00000569124 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
SCAMP2-210ENST00000569124 hDV102S1A0JD36 115 aa10.08□□□□□ -0.8
SCAMP2-210ENST00000569124 PRSS2P07478 247 aa10.08□□□□□ -0.8
SCAMP2-210ENST00000569124 SPINK8P0C7L1 97 aa10.08□□□□□ -0.8
SCAMP2-210ENST00000569124 SCXQ7RTU7 201 aa10.08□□□□□ -0.8
SCAMP2-210ENST00000569124 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
SCAMP2-210ENST00000569124 C15orf56Q8N910 161 aa10.07□□□□□ -0.8
SCAMP2-210ENST00000569124 TOMM7Q9P0U1 55 aa10.07□□□□□ -0.8
SCAMP2-210ENST00000569124 GVQW2A0A096LPI5 108 aaPredicted RBP10.06□□□□□ -0.8
SCAMP2-210ENST00000569124 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
SCAMP2-210ENST00000569124 SMIM1B2RUZ4 78 aa10.06□□□□□ -0.8
SCAMP2-210ENST00000569124 HIGD2BQ4VC39 106 aa10.06□□□□□ -0.8
SCAMP2-210ENST00000569124 LINC01620Q4KN68 170 aa10.05□□□□□ -0.8
SCAMP2-210ENST00000569124 LRP1Q07954 4544 aaKnown RBP10.05□□□□□ -0.8
SCAMP2-210ENST00000569124 HSBP1L1C9JCN9 74 aa10.04□□□□□ -0.8
SCAMP2-210ENST00000569124 C6orf226Q5I0X4 101 aa10.04□□□□□ -0.8
SCAMP2-210ENST00000569124 Q8IZM0 81 aa10.04□□□□□ -0.8
SCAMP2-210ENST00000569124 ATOH7Q8N100 152 aa10.04□□□□□ -0.8
SCAMP2-210ENST00000569124 COX7B2Q8TF08 81 aa10.04□□□□□ -0.8
SCAMP2-210ENST00000569124 HMCN2Q8NDA2 5059 aa10.04□□□□□ -0.8
SCAMP2-210ENST00000569124 OXTP01178 125 aa10.03□□□□□ -0.8
SCAMP2-210ENST00000569124 CKS1BP61024 79 aa10.03□□□□□ -0.8
SCAMP2-210ENST00000569124 JOSD1Q15040 202 aaPredicted RBP10.03□□□□□ -0.8
SCAMP2-210ENST00000569124 IGLV5-39A0A0G2JS06 123 aa10.02□□□□□ -0.81
SCAMP2-210ENST00000569124 F8WDY8 70 aa10.02□□□□□ -0.81
SCAMP2-210ENST00000569124 CXCL5P42830 114 aa10.02□□□□□ -0.81
SCAMP2-210ENST00000569124 PLEKHB2Q96CS7 222 aa10.02□□□□□ -0.81
SCAMP2-210ENST00000569124 C2orf48Q96LS8 159 aa10.02□□□□□ -0.81
SCAMP2-210ENST00000569124 CAMK2N2Q96S95 79 aa10.02□□□□□ -0.81
SCAMP2-210ENST00000569124 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
SCAMP2-210ENST00000569124 FAT3Q8TDW7 4589 aa10.01□□□□□ -0.81
SCAMP2-210ENST00000569124 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.01□□□□□ -0.81
SCAMP2-210ENST00000569124 UBR4Q5T4S7 5183 aa10□□□□□ -0.81
SCAMP2-210ENST00000569124 E9PLD3 99 aa10□□□□□ -0.81
SCAMP2-210ENST00000569124 NDUFA1O15239 70 aa10□□□□□ -0.81
SCAMP2-210ENST00000569124 LEPROTO15243 131 aa10□□□□□ -0.81
SCAMP2-210ENST00000569124 KRTAP10-4P60372 401 aaPredicted RBP10□□□□□ -0.81
SCAMP2-210ENST00000569124 STPG4Q8N801 248 aa10□□□□□ -0.81
SCAMP2-210ENST00000569124 LINC00526Q96FQ7 95 aa10□□□□□ -0.81
SCAMP2-210ENST00000569124 PKHD1L1Q86WI1 4243 aa9.99□□□□□ -0.81
SCAMP2-210ENST00000569124 LGALS3P17931 250 aaKnown RBP9.99□□□□□ -0.81
SCAMP2-210ENST00000569124 SYCNQ0VAF6 134 aa9.99□□□□□ -0.81
SCAMP2-210ENST00000569124 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
SCAMP2-210ENST00000569124 SFTA2Q6UW10 78 aa9.99□□□□□ -0.81
SCAMP2-210ENST00000569124 CIRBP-AS1Q8TBR5 109 aa9.99□□□□□ -0.81
SCAMP2-210ENST00000569124 CARD19Q96LW7 228 aa9.98□□□□□ -0.81
SCAMP2-210ENST00000569124 J3QQQ9 107 aa9.97□□□□□ -0.81
SCAMP2-210ENST00000569124 CNBPP62633 177 aaKnown RBP9.97□□□□□ -0.81
SCAMP2-210ENST00000569124 PYY3Q5JQD4 70 aa9.96□□□□□ -0.82
SCAMP2-210ENST00000569124 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
SCAMP2-210ENST00000569124 MYMXA0A1B0GTQ4 84 aa9.95□□□□□ -0.82
SCAMP2-210ENST00000569124 NMUP48645 174 aa9.95□□□□□ -0.82
SCAMP2-210ENST00000569124 C2orf82Q6UX34 121 aa9.95□□□□□ -0.82
SCAMP2-210ENST00000569124 VAMP8Q9BV40 100 aa9.95□□□□□ -0.82
SCAMP2-210ENST00000569124 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
SCAMP2-210ENST00000569124 LOC105371267A0A1B0GV96 52 aa9.94□□□□□ -0.82
SCAMP2-210ENST00000569124 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
SCAMP2-210ENST00000569124 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
SCAMP2-210ENST00000569124 ANKRD39Q53RE8 183 aa9.94□□□□□ -0.82
SCAMP2-210ENST00000569124 UNQ6190/PRO20217Q6UXQ8 127 aa9.94□□□□□ -0.82
SCAMP2-210ENST00000569124 Q6ZRU5 148 aa9.94□□□□□ -0.82
SCAMP2-210ENST00000569124 NDUFA12Q9UI09 145 aa9.94□□□□□ -0.82
SCAMP2-210ENST00000569124 SLPIP03973 132 aa9.93□□□□□ -0.82
SCAMP2-210ENST00000569124 HERV-K104P63124 156 aa9.93□□□□□ -0.82
SCAMP2-210ENST00000569124 TSPEAR-AS2P59090 65 aa9.92□□□□□ -0.82
SCAMP2-210ENST00000569124 S100A12P80511 92 aa9.92□□□□□ -0.82
SCAMP2-210ENST00000569124 RNF151Q2KHN1 245 aa9.92□□□□□ -0.82
SCAMP2-210ENST00000569124 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
SCAMP2-210ENST00000569124 LINC00587B1AMM8 73 aa9.91□□□□□ -0.82
SCAMP2-210ENST00000569124 SPATA45Q537H7 98 aa9.91□□□□□ -0.82
SCAMP2-210ENST00000569124 C10orf25Q5T742 122 aa9.91□□□□□ -0.82
SCAMP2-210ENST00000569124 C9orf163Q8N9P6 203 aa9.91□□□□□ -0.82
SCAMP2-210ENST00000569124 ZNF625Q96I27 306 aaPredicted RBP9.91□□□□□ -0.82
SCAMP2-210ENST00000569124 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
SCAMP2-210ENST00000569124 PAM16Q9Y3D7 125 aa9.91□□□□□ -0.82
SCAMP2-210ENST00000569124 ZNF815PA8K554 130 aa9.9□□□□□ -0.82
SCAMP2-210ENST00000569124 SMIM6P0DI80 62 aa9.9□□□□□ -0.82
SCAMP2-210ENST00000569124 MEIG1Q5JSS6 88 aa9.9□□□□□ -0.82
SCAMP2-210ENST00000569124 LOC107984640A0A0U1RRK4 108 aa9.88□□□□□ -0.83
SCAMP2-210ENST00000569124 ERG28Q9UKR5 140 aa9.88□□□□□ -0.83
SCAMP2-210ENST00000569124 RPL18AQ02543 176 aaKnown RBP9.87□□□□□ -0.83
SCAMP2-210ENST00000569124 CIRBPQ14011 172 aaKnown RBP9.87□□□□□ -0.83
SCAMP2-210ENST00000569124 COX17Q14061 63 aa9.87□□□□□ -0.83
SCAMP2-210ENST00000569124 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
SCAMP2-210ENST00000569124 SCGB1D4Q6XE38 83 aa9.87□□□□□ -0.83
SCAMP2-210ENST00000569124 PFN2P35080 140 aa9.86□□□□□ -0.83
SCAMP2-210ENST00000569124 HNRNPA3P51991 378 aaKnown RBP9.86□□□□□ -0.83
SCAMP2-210ENST00000569124 PCP2Q8IVA1 136 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms