RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 IGKCP01834 107 aa10.79□□□□□ -0.68
COMMD4-224ENST00000568877 CKS1BP61024 79 aa10.79□□□□□ -0.68
COMMD4-224ENST00000568877 C2orf82Q6UX34 121 aa10.79□□□□□ -0.68
COMMD4-224ENST00000568877 UNQ6190/PRO20217Q6UXQ8 127 aa10.79□□□□□ -0.68
COMMD4-224ENST00000568877 COX7B2Q8TF08 81 aa10.79□□□□□ -0.68
COMMD4-224ENST00000568877 RNF151Q2KHN1 245 aa10.78□□□□□ -0.68
COMMD4-224ENST00000568877 C10orf25Q5T742 122 aa10.78□□□□□ -0.68
COMMD4-224ENST00000568877 LINC01545Q5VT33 79 aa10.78□□□□□ -0.68
COMMD4-224ENST00000568877 SDIM1Q6ZPB5 146 aa10.78□□□□□ -0.68
COMMD4-224ENST00000568877 BIRC6Q9NR09 4857 aa10.77□□□□□ -0.68
COMMD4-224ENST00000568877 CXCL5P42830 114 aa10.76□□□□□ -0.69
COMMD4-224ENST00000568877 C6orf48Q9UBA6 75 aa10.75□□□□□ -0.69
COMMD4-224ENST00000568877 APOBP04114 4563 aaKnown RBP10.75□□□□□ -0.69
COMMD4-224ENST00000568877 TRBV30A0A0K0K1B3 111 aa10.74□□□□□ -0.69
COMMD4-224ENST00000568877 C20orf202A1L168 122 aa10.74□□□□□ -0.69
COMMD4-224ENST00000568877 Q6ZSA8 131 aa10.74□□□□□ -0.69
COMMD4-224ENST00000568877 FAM30AQ9NZY2 134 aa10.74□□□□□ -0.69
COMMD4-224ENST00000568877 PKIGQ9Y2B9 76 aa10.74□□□□□ -0.69
COMMD4-224ENST00000568877 TMA7Q9Y2S6 64 aaKnown RBP10.73□□□□□ -0.69
COMMD4-224ENST00000568877 LOC107984640A0A0U1RRK4 108 aa10.72□□□□□ -0.69
COMMD4-224ENST00000568877 HERVK_113P61574 105 aa10.72□□□□□ -0.69
COMMD4-224ENST00000568877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.71□□□□□ -0.69
COMMD4-224ENST00000568877 CDK2AP2O75956 126 aa10.7□□□□□ -0.7
COMMD4-224ENST00000568877 TLX1NBP0CAT3 122 aa10.7□□□□□ -0.7
COMMD4-224ENST00000568877 CHTF8P0CG12 524 aa10.7□□□□□ -0.7
COMMD4-224ENST00000568877 C9orf116Q5BN46 136 aaPredicted RBP10.7□□□□□ -0.7
COMMD4-224ENST00000568877 A0A096LNI7 61 aa10.69□□□□□ -0.7
COMMD4-224ENST00000568877 IGKV2-24A0A0C4DH68 120 aa10.69□□□□□ -0.7
COMMD4-224ENST00000568877 PANO1I0J062 215 aa10.69□□□□□ -0.7
COMMD4-224ENST00000568877 LEPROTO15243 131 aa10.69□□□□□ -0.7
COMMD4-224ENST00000568877 AKR1D1P51857 326 aa10.69□□□□□ -0.7
COMMD4-224ENST00000568877 XGP55808 180 aa10.69□□□□□ -0.7
COMMD4-224ENST00000568877 RPL18AQ02543 176 aaKnown RBP10.69□□□□□ -0.7
COMMD4-224ENST00000568877 SFTA2Q6UW10 78 aa10.69□□□□□ -0.7
COMMD4-224ENST00000568877 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
COMMD4-224ENST00000568877 PTTG1IPP53801 180 aa10.68□□□□□ -0.7
COMMD4-224ENST00000568877 GAGE2BQ13066 116 aa10.68□□□□□ -0.7
COMMD4-224ENST00000568877 CIRBPQ14011 172 aaKnown RBP10.68□□□□□ -0.7
COMMD4-224ENST00000568877 ZNF625Q96I27 306 aaPredicted RBP10.68□□□□□ -0.7
COMMD4-224ENST00000568877 E9PLD3 99 aa10.67□□□□□ -0.7
COMMD4-224ENST00000568877 NDUFC2-KCTD14E9PQ53 114 aa10.67□□□□□ -0.7
COMMD4-224ENST00000568877 Q6ZRP5 223 aa10.67□□□□□ -0.7
COMMD4-224ENST00000568877 STPG4Q8N801 248 aa10.67□□□□□ -0.7
COMMD4-224ENST00000568877 SPACA4Q8TDM5 124 aa10.67□□□□□ -0.7
COMMD4-224ENST00000568877 DPH3Q96FX2 82 aa10.67□□□□□ -0.7
COMMD4-224ENST00000568877 LINC00474Q9P2X8 69 aa10.67□□□□□ -0.7
COMMD4-224ENST00000568877 KIAA1109Q2LD37 5005 aa10.67□□□□□ -0.7
COMMD4-224ENST00000568877 J3QQQ9 107 aa10.66□□□□□ -0.7
COMMD4-224ENST00000568877 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
COMMD4-224ENST00000568877 HAMPP81172 84 aa10.66□□□□□ -0.7
COMMD4-224ENST00000568877 MAJINQ3KP22 176 aa10.66□□□□□ -0.7
COMMD4-224ENST00000568877 SCXQ7RTU7 201 aa10.65□□□□□ -0.7
COMMD4-224ENST00000568877 ATOH7Q8N100 152 aa10.65□□□□□ -0.7
COMMD4-224ENST00000568877 NDUFA12Q9UI09 145 aa10.65□□□□□ -0.7
COMMD4-224ENST00000568877 RYR1P21817 5038 aa10.64□□□□□ -0.71
COMMD4-224ENST00000568877 HSPG2P98160 4391 aa10.64□□□□□ -0.71
COMMD4-224ENST00000568877 LGALS3P17931 250 aaKnown RBP10.64□□□□□ -0.71
COMMD4-224ENST00000568877 GAGE2EQ4V326 116 aa10.64□□□□□ -0.71
COMMD4-224ENST00000568877 CIRBP-AS1Q8TBR5 109 aa10.64□□□□□ -0.71
COMMD4-224ENST00000568877 GAGE2DQ9UEU5 116 aa10.64□□□□□ -0.71
COMMD4-224ENST00000568877 MYMXA0A1B0GTQ4 84 aa10.63□□□□□ -0.71
COMMD4-224ENST00000568877 ERG28Q9UKR5 140 aa10.63□□□□□ -0.71
COMMD4-224ENST00000568877 A0A087WYN8 130 aa10.62□□□□□ -0.71
COMMD4-224ENST00000568877 SCGB1D1O95968 90 aa10.62□□□□□ -0.71
COMMD4-224ENST00000568877 PFN2P35080 140 aa10.62□□□□□ -0.71
COMMD4-224ENST00000568877 NMUP48645 174 aa10.62□□□□□ -0.71
COMMD4-224ENST00000568877 HERV-K104P63124 156 aa10.62□□□□□ -0.71
COMMD4-224ENST00000568877 COX17Q14061 63 aa10.61□□□□□ -0.71
COMMD4-224ENST00000568877 IGKV2D-26A0A0A0MRZ7 120 aa10.6□□□□□ -0.71
COMMD4-224ENST00000568877 PLAC8Q9NZF1 115 aa10.6□□□□□ -0.71
COMMD4-224ENST00000568877 ANKRD39Q53RE8 183 aa10.59□□□□□ -0.71
COMMD4-224ENST00000568877 C9orf129Q5T035 196 aaKnown RBP10.59□□□□□ -0.71
COMMD4-224ENST00000568877 LINC00587B1AMM8 73 aa10.58□□□□□ -0.72
COMMD4-224ENST00000568877 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
COMMD4-224ENST00000568877 XAGE1AQ9HD64 81 aa10.58□□□□□ -0.72
COMMD4-224ENST00000568877 A0A1W2PNN7 141 aa10.57□□□□□ -0.72
COMMD4-224ENST00000568877 LINC00158P58513 81 aa10.57□□□□□ -0.72
COMMD4-224ENST00000568877 A0A0U1RRA0 63 aa10.56□□□□□ -0.72
COMMD4-224ENST00000568877 EPM2AB3EWF7 344 aa10.56□□□□□ -0.72
COMMD4-224ENST00000568877 HSBP1L1C9JCN9 74 aa10.56□□□□□ -0.72
COMMD4-224ENST00000568877 SMR3BP02814 79 aaPredicted RBP10.56□□□□□ -0.72
COMMD4-224ENST00000568877 SMIM13P0DJ93 91 aa10.56□□□□□ -0.72
COMMD4-224ENST00000568877 FAM168BA1KXE4 195 aa10.55□□□□□ -0.72
COMMD4-224ENST00000568877 JOSD1Q15040 202 aaPredicted RBP10.55□□□□□ -0.72
COMMD4-224ENST00000568877 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
COMMD4-224ENST00000568877 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
COMMD4-224ENST00000568877 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
COMMD4-224ENST00000568877 FAT1Q14517 4588 aa10.53□□□□□ -0.72
COMMD4-224ENST00000568877 A0A0J9YXY3 114 aa10.53□□□□□ -0.72
COMMD4-224ENST00000568877 FAM19A5Q7Z5A7 132 aaPredicted RBP10.53□□□□□ -0.72
COMMD4-224ENST00000568877 HERC2O95714 4834 aa10.53□□□□□ -0.72
COMMD4-224ENST00000568877 KRTAP7-1Q8IUC3 87 aa10.52□□□□□ -0.73
COMMD4-224ENST00000568877 MIR7-3HGQ8N6C7 128 aa10.52□□□□□ -0.73
COMMD4-224ENST00000568877 PCP2Q8IVA1 136 aa10.51□□□□□ -0.73
COMMD4-224ENST00000568877 LINC00528Q8N1L1 170 aa10.51□□□□□ -0.73
COMMD4-224ENST00000568877 Q8N1X5 172 aa10.51□□□□□ -0.73
COMMD4-224ENST00000568877 PLA2G2DQ9UNK4 145 aa10.51□□□□□ -0.73
COMMD4-224ENST00000568877 SERTAD4-AS1Q5TG53 156 aa10.5□□□□□ -0.73
COMMD4-224ENST00000568877 KRTAP17-1Q9BYP8 105 aa10.5□□□□□ -0.73
COMMD4-224ENST00000568877 C7orf33Q8WU49 177 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms