RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CYTL1Q9NRR1 136 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 ANAPC11Q9NYG5 84 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 UBE2D4Q9Y2X8 147 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 TRBV20OR9-2A0A075B6H5 130 aa3.21□□□□□ -1.9
CDH13-211ENST00000568770 TRBV27A0A0K0K1C4 114 aa3.21□□□□□ -1.9
CDH13-211ENST00000568770 F8WDY8 70 aa3.21□□□□□ -1.9
CDH13-211ENST00000568770 POLR2KP53803 58 aaKnown RBP3.21□□□□□ -1.9
CDH13-211ENST00000568770 CCL20P78556 96 aa3.21□□□□□ -1.9
CDH13-211ENST00000568770 LINC00304Q8N9R0 145 aa3.21□□□□□ -1.9
CDH13-211ENST00000568770 SMIM12Q96EX1 92 aa3.21□□□□□ -1.9
CDH13-211ENST00000568770 FAM210AQ96ND0 272 aa3.21□□□□□ -1.9
CDH13-211ENST00000568770 PPDPFQ9H3Y8 114 aa3.21□□□□□ -1.9
CDH13-211ENST00000568770 GNG13Q9P2W3 67 aa3.21□□□□□ -1.9
CDH13-211ENST00000568770 CSDC2Q9Y534 153 aaKnown RBP3.21□□□□□ -1.9
CDH13-211ENST00000568770 IGHV3OR16-9A0A0B4J2B5 98 aa3.2□□□□□ -1.9
CDH13-211ENST00000568770 UMAD1C9J7I0 102 aa3.2□□□□□ -1.9
CDH13-211ENST00000568770 ARPC5O15511 151 aa3.2□□□□□ -1.9
CDH13-211ENST00000568770 NUPR1O60356 82 aa3.2□□□□□ -1.9
CDH13-211ENST00000568770 GIPP09681 153 aaPredicted RBP3.2□□□□□ -1.9
CDH13-211ENST00000568770 RPL28P46779 137 aaKnown RBP3.2□□□□□ -1.9
CDH13-211ENST00000568770 Q6ZUT4 128 aa3.2□□□□□ -1.9
CDH13-211ENST00000568770 MANBALQ9NQG1 85 aa3.2□□□□□ -1.9
CDH13-211ENST00000568770 NDUFA13Q9P0J0 144 aa3.2□□□□□ -1.9
CDH13-211ENST00000568770 DHRS4-AS1Q9P1J3 65 aa3.2□□□□□ -1.9
CDH13-211ENST00000568770 TRBV30A0A0K0K1B3 111 aa3.19□□□□□ -1.9
CDH13-211ENST00000568770 NDUFC2-KCTD14E9PQ53 114 aa3.19□□□□□ -1.9
CDH13-211ENST00000568770 FCER1GP30273 86 aa3.19□□□□□ -1.9
CDH13-211ENST00000568770 SMAGPQ0VAQ4 97 aa3.19□□□□□ -1.9
CDH13-211ENST00000568770 ASB16-AS1Q495Z4 193 aa3.19□□□□□ -1.9
CDH13-211ENST00000568770 LINC00242Q5T6M2 205 aa3.19□□□□□ -1.9
CDH13-211ENST00000568770 C2orf82Q6UX34 121 aa3.19□□□□□ -1.9
CDH13-211ENST00000568770 BIN3Q9NQY0 253 aa3.19□□□□□ -1.9
CDH13-211ENST00000568770 C22orf24Q9Y442 160 aa3.19□□□□□ -1.9
CDH13-211ENST00000568770 SMKR1H3BMG3 65 aa3.18□□□□□ -1.9
CDH13-211ENST00000568770 K7EN84 100 aa3.18□□□□□ -1.9
CDH13-211ENST00000568770 BCE1O60756 84 aa3.18□□□□□ -1.9
CDH13-211ENST00000568770 KIAA0087Q14695 138 aa3.18□□□□□ -1.9
CDH13-211ENST00000568770 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
CDH13-211ENST00000568770 LINC00469Q8N7U9 141 aa3.18□□□□□ -1.9
CDH13-211ENST00000568770 MED9Q9NWA0 146 aa3.18□□□□□ -1.9
CDH13-211ENST00000568770 PDE6DO43924 150 aa3.17□□□□□ -1.9
CDH13-211ENST00000568770 RAB4AP20338 218 aa3.17□□□□□ -1.9
CDH13-211ENST00000568770 FAM229BQ4G0N7 80 aa3.17□□□□□ -1.9
CDH13-211ENST00000568770 LINC00518Q8N0U6 118 aa3.17□□□□□ -1.9
CDH13-211ENST00000568770 FAM104AQ969W3 186 aa3.17□□□□□ -1.9
CDH13-211ENST00000568770 KIR2DL4Q99706 377 aa3.17□□□□□ -1.9
CDH13-211ENST00000568770 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
CDH13-211ENST00000568770 TMEM191AQ9H0A3 160 aa3.17□□□□□ -1.9
CDH13-211ENST00000568770 IGKV2D-26A0A0A0MRZ7 120 aa3.16□□□□□ -1.9
CDH13-211ENST00000568770 TGIF2-C20orf24A0A0A6YYL0 155 aa3.16□□□□□ -1.9
CDH13-211ENST00000568770 ZNF727A8MUV8 499 aa3.16□□□□□ -1.9
CDH13-211ENST00000568770 RPL39P62891 51 aaKnown RBP3.16□□□□□ -1.9
CDH13-211ENST00000568770 CTAG1AP78358 180 aa3.16□□□□□ -1.9
CDH13-211ENST00000568770 KRTAP13-3Q3SY46 172 aa3.16□□□□□ -1.9
CDH13-211ENST00000568770 MRPL55Q7Z7F7 128 aaKnown RBP3.16□□□□□ -1.9
CDH13-211ENST00000568770 AMN1Q8IY45 258 aa3.16□□□□□ -1.9
CDH13-211ENST00000568770 BORCS7Q96B45 105 aa3.16□□□□□ -1.9
CDH13-211ENST00000568770 PACRGQ96M98 296 aaPredicted RBP3.16□□□□□ -1.9
CDH13-211ENST00000568770 XAGE1AQ9HD64 81 aa3.16□□□□□ -1.9
CDH13-211ENST00000568770 A0A1B0GUT8 65 aa3.15□□□□□ -1.91
CDH13-211ENST00000568770 A8MWL6 223 aa3.15□□□□□ -1.91
CDH13-211ENST00000568770 SMLR1H3BR10 107 aa3.15□□□□□ -1.91
CDH13-211ENST00000568770 GATCO43716 136 aaKnown RBP3.15□□□□□ -1.91
CDH13-211ENST00000568770 HBBP68871 147 aa3.15□□□□□ -1.91
CDH13-211ENST00000568770 FP248Q71RG6 208 aaPredicted RBP3.15□□□□□ -1.91
CDH13-211ENST00000568770 KRTAP13-1Q8IUC0 172 aa3.15□□□□□ -1.91
CDH13-211ENST00000568770 TP73-AS1Q9UF72 201 aa3.15□□□□□ -1.91
CDH13-211ENST00000568770 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
CDH13-211ENST00000568770 ATP6V1G1O75348 118 aa3.14□□□□□ -1.91
CDH13-211ENST00000568770 PPP1R17O96001 155 aa3.14□□□□□ -1.91
CDH13-211ENST00000568770 UBE2AP49459 152 aa3.14□□□□□ -1.91
CDH13-211ENST00000568770 CKS1BP61024 79 aa3.14□□□□□ -1.91
CDH13-211ENST00000568770 MT1HP80294 61 aa3.14□□□□□ -1.91
CDH13-211ENST00000568770 MRPS36P82909 103 aaKnown RBP3.14□□□□□ -1.91
CDH13-211ENST00000568770 ZNF345Q14585 488 aa3.14□□□□□ -1.91
CDH13-211ENST00000568770 LINC00167Q96N53 147 aa3.14□□□□□ -1.91
CDH13-211ENST00000568770 SPANXA1Q9NS26 97 aa3.14□□□□□ -1.91
CDH13-211ENST00000568770 KANTRA0A1W2PQU2 76 aa3.13□□□□□ -1.91
CDH13-211ENST00000568770 TEX46H3BTG2 121 aa3.13□□□□□ -1.91
CDH13-211ENST00000568770 PPP1R2P9O14990 202 aa3.13□□□□□ -1.91
CDH13-211ENST00000568770 RPL32P62910 135 aaKnown RBP3.13□□□□□ -1.91
CDH13-211ENST00000568770 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
CDH13-211ENST00000568770 FAM231DQ6ZW35 169 aa3.13□□□□□ -1.91
CDH13-211ENST00000568770 C3orf22Q8N5N4 141 aa3.13□□□□□ -1.91
CDH13-211ENST00000568770 TOMM7Q9P0U1 55 aa3.13□□□□□ -1.91
CDH13-211ENST00000568770 A0A0U1RRA0 63 aa3.12□□□□□ -1.91
CDH13-211ENST00000568770 PRLHP81277 87 aa3.12□□□□□ -1.91
CDH13-211ENST00000568770 MRPL51Q4U2R6 128 aaKnown RBP3.12□□□□□ -1.91
CDH13-211ENST00000568770 C6orf226Q5I0X4 101 aa3.12□□□□□ -1.91
CDH13-211ENST00000568770 SPAG11AQ6PDA7 123 aa3.12□□□□□ -1.91
CDH13-211ENST00000568770 C20orf78Q9BR46 151 aa3.12□□□□□ -1.91
CDH13-211ENST00000568770 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
CDH13-211ENST00000568770 TRBV24-1A0A075B6N3 115 aa3.11□□□□□ -1.91
CDH13-211ENST00000568770 IGKV2-28A0A075B6P5 120 aa3.11□□□□□ -1.91
CDH13-211ENST00000568770 HMSDA8MTL9 139 aa3.11□□□□□ -1.91
CDH13-211ENST00000568770 TCAPO15273 167 aa3.11□□□□□ -1.91
CDH13-211ENST00000568770 IGKV2D-28P01615 120 aa3.11□□□□□ -1.91
CDH13-211ENST00000568770 IFI27P40305 119 aaPredicted RBP3.11□□□□□ -1.91
CDH13-211ENST00000568770 Q1RN00 199 aa3.11□□□□□ -1.91
CDH13-211ENST00000568770 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms