RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 SPINK8P0C7L1 97 aa5.08□□□□□ -1.6
SMG1-214ENST00000568038 ZNF22P17026 224 aaPredicted RBP5.08□□□□□ -1.6
SMG1-214ENST00000568038 HIGD2BQ4VC39 106 aa5.08□□□□□ -1.6
SMG1-214ENST00000568038 LINC01545Q5VT33 79 aa5.08□□□□□ -1.6
SMG1-214ENST00000568038 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
SMG1-214ENST00000568038 IGHV3-64A0A075B6Q5 118 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 A0A087WTM6 91 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 IGHV1-58A0A0C4DH39 117 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 C20orf202A1L168 122 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 H3BRM9 83 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 APOMO95445 188 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 IGKCP01834 107 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 PLNP26678 52 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 C15orf56Q8N910 161 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 ORAOV1Q8WV07 137 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 LINC00526Q96FQ7 95 aa5.07□□□□□ -1.6
SMG1-214ENST00000568038 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.06□□□□□ -1.6
SMG1-214ENST00000568038 hDV102S1A0JD36 115 aa5.06□□□□□ -1.6
SMG1-214ENST00000568038 SMIM1B2RUZ4 78 aa5.06□□□□□ -1.6
SMG1-214ENST00000568038 PRYO14603 147 aa5.06□□□□□ -1.6
SMG1-214ENST00000568038 SCGB1D1O95968 90 aa5.06□□□□□ -1.6
SMG1-214ENST00000568038 LINC00336Q6ZUF6 198 aa5.06□□□□□ -1.6
SMG1-214ENST00000568038 ATOH7Q8N100 152 aa5.06□□□□□ -1.6
SMG1-214ENST00000568038 LINC01561Q8N1V8 128 aa5.06□□□□□ -1.6
SMG1-214ENST00000568038 TOMM7Q9P0U1 55 aa5.06□□□□□ -1.6
SMG1-214ENST00000568038 VPS13DQ5THJ4 4388 aa5.05□□□□□ -1.6
SMG1-214ENST00000568038 TMEM223A0PJW6 202 aa5.05□□□□□ -1.6
SMG1-214ENST00000568038 GAGE10A6NGK3 116 aa5.05□□□□□ -1.6
SMG1-214ENST00000568038 FUSP35637 526 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMG1-214ENST00000568038 AKR1D1P51857 326 aa5.05□□□□□ -1.6
SMG1-214ENST00000568038 SPAG11BQ08648 103 aa5.05□□□□□ -1.6
SMG1-214ENST00000568038 C14orf177Q52M58 125 aa5.05□□□□□ -1.6
SMG1-214ENST00000568038 Q8N814 137 aa5.05□□□□□ -1.6
SMG1-214ENST00000568038 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
SMG1-214ENST00000568038 LYSTQ99698 3801 aa5.05□□□□□ -1.6
SMG1-214ENST00000568038 GVQW2A0A096LPI5 108 aaPredicted RBP5.04□□□□□ -1.6
SMG1-214ENST00000568038 IGLV5-39A0A0G2JS06 123 aa5.04□□□□□ -1.6
SMG1-214ENST00000568038 PRSS2P07478 247 aa5.04□□□□□ -1.6
SMG1-214ENST00000568038 C6orf226Q5I0X4 101 aa5.04□□□□□ -1.6
SMG1-214ENST00000568038 STPG4Q8N801 248 aa5.04□□□□□ -1.6
SMG1-214ENST00000568038 MPLKIPQ8TAP9 179 aa5.04□□□□□ -1.6
SMG1-214ENST00000568038 COX7B2Q8TF08 81 aa5.04□□□□□ -1.6
SMG1-214ENST00000568038 KMT2AQ03164 3969 aa5.03□□□□□ -1.6
SMG1-214ENST00000568038 HERVK_113P61574 105 aa5.03□□□□□ -1.6
SMG1-214ENST00000568038 KIAA0087Q14695 138 aa5.03□□□□□ -1.6
SMG1-214ENST00000568038 C2orf82Q6UX34 121 aa5.03□□□□□ -1.6
SMG1-214ENST00000568038 Q8IZM0 81 aa5.03□□□□□ -1.6
SMG1-214ENST00000568038 CAMK2N2Q96S95 79 aa5.03□□□□□ -1.6
SMG1-214ENST00000568038 HYDINQ4G0P3 5121 aa5.02□□□□□ -1.61
SMG1-214ENST00000568038 CKS1BP61024 79 aa5.02□□□□□ -1.61
SMG1-214ENST00000568038 SYCNQ0VAF6 134 aa5.02□□□□□ -1.61
SMG1-214ENST00000568038 JOSD1Q15040 202 aaPredicted RBP5.02□□□□□ -1.61
SMG1-214ENST00000568038 MAJINQ3KP22 176 aa5.02□□□□□ -1.61
SMG1-214ENST00000568038 UNQ6190/PRO20217Q6UXQ8 127 aa5.02□□□□□ -1.61
SMG1-214ENST00000568038 DNAH1Q9P2D7 4330 aa5.02□□□□□ -1.61
SMG1-214ENST00000568038 IGLV5-52A0A0A0MRZ9 124 aa5.01□□□□□ -1.61
SMG1-214ENST00000568038 E9PLD3 99 aa5.01□□□□□ -1.61
SMG1-214ENST00000568038 NDUFA1O15239 70 aa5.01□□□□□ -1.61
SMG1-214ENST00000568038 LEPROTO15243 131 aa5.01□□□□□ -1.61
SMG1-214ENST00000568038 PYY3Q5JQD4 70 aa5.01□□□□□ -1.61
SMG1-214ENST00000568038 Q6ZRU5 148 aa5.01□□□□□ -1.61
SMG1-214ENST00000568038 PLEKHB2Q96CS7 222 aa5.01□□□□□ -1.61
SMG1-214ENST00000568038 C2orf48Q96LS8 159 aa5.01□□□□□ -1.61
SMG1-214ENST00000568038 IGKV2D-26A0A0A0MRZ7 120 aa5□□□□□ -1.61
SMG1-214ENST00000568038 TRAV16A0A0A6YYK6 109 aaPredicted RBP5□□□□□ -1.61
SMG1-214ENST00000568038 LOC105371267A0A1B0GV96 52 aa5□□□□□ -1.61
SMG1-214ENST00000568038 A0A1B0GVY2 172 aa5□□□□□ -1.61
SMG1-214ENST00000568038 HSBP1L1C9JCN9 74 aa5□□□□□ -1.61
SMG1-214ENST00000568038 J3QQQ9 107 aa5□□□□□ -1.61
SMG1-214ENST00000568038 LGALS3P17931 250 aaKnown RBP5□□□□□ -1.61
SMG1-214ENST00000568038 TSPEAR-AS2P59090 65 aa5□□□□□ -1.61
SMG1-214ENST00000568038 CNBPP62633 177 aaKnown RBP5□□□□□ -1.61
SMG1-214ENST00000568038 LINC01620Q4KN68 170 aa5□□□□□ -1.61
SMG1-214ENST00000568038 ZNF625Q96I27 306 aaPredicted RBP5□□□□□ -1.61
SMG1-214ENST00000568038 CARD19Q96LW7 228 aa5□□□□□ -1.61
SMG1-214ENST00000568038 DNAH6Q9C0G6 4158 aa4.99□□□□□ -1.61
SMG1-214ENST00000568038 SACSQ9NZJ4 4579 aa4.99□□□□□ -1.61
SMG1-214ENST00000568038 F8WDY8 70 aa4.99□□□□□ -1.61
SMG1-214ENST00000568038 CXCL5P42830 114 aa4.99□□□□□ -1.61
SMG1-214ENST00000568038 NMUP48645 174 aa4.99□□□□□ -1.61
SMG1-214ENST00000568038 C9orf116Q5BN46 136 aaPredicted RBP4.99□□□□□ -1.61
SMG1-214ENST00000568038 TTTY13Q9BZ97 58 aa4.99□□□□□ -1.61
SMG1-214ENST00000568038 C6orf48Q9UBA6 75 aa4.99□□□□□ -1.61
SMG1-214ENST00000568038 NDUFA12Q9UI09 145 aa4.99□□□□□ -1.61
SMG1-214ENST00000568038 MYMXA0A1B0GTQ4 84 aa4.98□□□□□ -1.61
SMG1-214ENST00000568038 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
SMG1-214ENST00000568038 C9orf163Q8N9P6 203 aa4.98□□□□□ -1.61
SMG1-214ENST00000568038 PAM16Q9Y3D7 125 aa4.98□□□□□ -1.61
SMG1-214ENST00000568038 KMT2CQ8NEZ4 4911 aaKnown RBP4.97□□□□□ -1.61
SMG1-214ENST00000568038 TRBV30A0A0K0K1B3 111 aa4.97□□□□□ -1.61
SMG1-214ENST00000568038 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
SMG1-214ENST00000568038 C16orf90A8MZG2 172 aa4.97□□□□□ -1.61
SMG1-214ENST00000568038 PCP2Q8IVA1 136 aa4.97□□□□□ -1.61
SMG1-214ENST00000568038 VAMP8Q9BV40 100 aa4.97□□□□□ -1.61
SMG1-214ENST00000568038 RYR2Q92736 4967 aa4.96□□□□□ -1.61
SMG1-214ENST00000568038 A0A0U1RRA0 63 aa4.96□□□□□ -1.62
SMG1-214ENST00000568038 PFN2P35080 140 aa4.96□□□□□ -1.62
SMG1-214ENST00000568038 HERV-K104P63124 156 aa4.96□□□□□ -1.62
SMG1-214ENST00000568038 RPL18AQ02543 176 aaKnown RBP4.96□□□□□ -1.62
SMG1-214ENST00000568038 GAGE2BQ13066 116 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms