RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 SMCPP49901 116 aaPredicted RBP6.26□□□□□ -1.41
CLK3-220ENST00000567992 FA2HQ7L5A8 372 aa6.26□□□□□ -1.41
CLK3-220ENST00000567992 HSPB8Q9UJY1 196 aa6.26□□□□□ -1.41
CLK3-220ENST00000567992 A0A087WZ39 114 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 EPM2AB3EWF7 344 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 SYS1-DBNDD2H3BUS1 97 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 LEPROTL1O95214 131 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 CHTF8P0CG12 524 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 IGLC3P0DOY3 106 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 G0S2P27469 103 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 PET117Q6UWS5 81 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 Q6ZN92 141 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 ERASQ7Z444 233 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 CARD19Q96LW7 228 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 VCX2Q9H322 139 aa6.25□□□□□ -1.41
CLK3-220ENST00000567992 ZNF561-AS1K7EIQ3 104 aa6.24□□□□□ -1.41
CLK3-220ENST00000567992 SPAG11BQ08648 103 aa6.24□□□□□ -1.41
CLK3-220ENST00000567992 SYCNQ0VAF6 134 aa6.24□□□□□ -1.41
CLK3-220ENST00000567992 Q6ZRU5 148 aa6.24□□□□□ -1.41
CLK3-220ENST00000567992 LINC00528Q8N1L1 170 aa6.24□□□□□ -1.41
CLK3-220ENST00000567992 SPACA4Q8TDM5 124 aa6.24□□□□□ -1.41
CLK3-220ENST00000567992 ORAOV1Q8WV07 137 aa6.24□□□□□ -1.41
CLK3-220ENST00000567992 C2orf48Q96LS8 159 aa6.24□□□□□ -1.41
CLK3-220ENST00000567992 SCGB3A1Q96QR1 104 aa6.24□□□□□ -1.41
CLK3-220ENST00000567992 LINC01549A6NIU2 74 aa6.23□□□□□ -1.41
CLK3-220ENST00000567992 APOMO95445 188 aa6.23□□□□□ -1.41
CLK3-220ENST00000567992 KRTAP10-4P60372 401 aaPredicted RBP6.23□□□□□ -1.41
CLK3-220ENST00000567992 KIAA0087Q14695 138 aa6.23□□□□□ -1.41
CLK3-220ENST00000567992 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
CLK3-220ENST00000567992 MAP1LC3CQ9BXW4 147 aa6.23□□□□□ -1.41
CLK3-220ENST00000567992 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
CLK3-220ENST00000567992 A0A096LNI7 61 aa6.22□□□□□ -1.41
CLK3-220ENST00000567992 A0A0J9YXV3 536 aa6.22□□□□□ -1.41
CLK3-220ENST00000567992 HBDP02042 147 aa6.22□□□□□ -1.41
CLK3-220ENST00000567992 LINC01545Q5VT33 79 aa6.22□□□□□ -1.41
CLK3-220ENST00000567992 LINC01561Q8N1V8 128 aa6.22□□□□□ -1.41
CLK3-220ENST00000567992 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
CLK3-220ENST00000567992 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
CLK3-220ENST00000567992 HNRNPA3P51991 378 aaKnown RBP6.21□□□□□ -1.42
CLK3-220ENST00000567992 C10orf25Q5T742 122 aa6.21□□□□□ -1.42
CLK3-220ENST00000567992 ATOH7Q8N100 152 aa6.21□□□□□ -1.42
CLK3-220ENST00000567992 CST9LQ9H4G1 147 aa6.21□□□□□ -1.42
CLK3-220ENST00000567992 CDKN2A-AS1Q9UH64 79 aa6.21□□□□□ -1.42
CLK3-220ENST00000567992 A0A087WYN8 130 aa6.2□□□□□ -1.42
CLK3-220ENST00000567992 IGKV2-24A0A0C4DH68 120 aa6.2□□□□□ -1.42
CLK3-220ENST00000567992 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.2□□□□□ -1.42
CLK3-220ENST00000567992 FAM229AH3BQW9 127 aa6.2□□□□□ -1.42
CLK3-220ENST00000567992 HERVK_113P63121 156 aa6.2□□□□□ -1.42
CLK3-220ENST00000567992 PMVKQ15126 192 aa6.2□□□□□ -1.42
CLK3-220ENST00000567992 MAJINQ3KP22 176 aa6.2□□□□□ -1.42
CLK3-220ENST00000567992 COL5A1-AS1Q5SY13 56 aa6.2□□□□□ -1.42
CLK3-220ENST00000567992 MRPL35Q9NZE8 188 aaKnown RBP6.2□□□□□ -1.42
CLK3-220ENST00000567992 PLAC8Q9NZF1 115 aa6.2□□□□□ -1.42
CLK3-220ENST00000567992 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
CLK3-220ENST00000567992 TINCRA0A1B0GVN0 87 aa6.19□□□□□ -1.42
CLK3-220ENST00000567992 HSBP1L1C9JCN9 74 aa6.19□□□□□ -1.42
CLK3-220ENST00000567992 F8WDY8 70 aa6.19□□□□□ -1.42
CLK3-220ENST00000567992 SEC11AP67812 179 aa6.19□□□□□ -1.42
CLK3-220ENST00000567992 RNF151Q2KHN1 245 aa6.19□□□□□ -1.42
CLK3-220ENST00000567992 UNQ6190/PRO20217Q6UXQ8 127 aa6.19□□□□□ -1.42
CLK3-220ENST00000567992 C6orf48Q9UBA6 75 aa6.19□□□□□ -1.42
CLK3-220ENST00000567992 LOC107984640A0A0U1RRK4 108 aa6.18□□□□□ -1.42
CLK3-220ENST00000567992 SMIM1B2RUZ4 78 aa6.18□□□□□ -1.42
CLK3-220ENST00000567992 J3QL48 77 aa6.18□□□□□ -1.42
CLK3-220ENST00000567992 NDUFA1O15239 70 aa6.18□□□□□ -1.42
CLK3-220ENST00000567992 PTTG1IPP53801 180 aa6.18□□□□□ -1.42
CLK3-220ENST00000567992 C2orf82Q6UX34 121 aa6.18□□□□□ -1.42
CLK3-220ENST00000567992 PMCHL2Q9BQD1 86 aa6.18□□□□□ -1.42
CLK3-220ENST00000567992 GEMIN7Q9H840 131 aaKnown RBP6.18□□□□□ -1.42
CLK3-220ENST00000567992 PKIGQ9Y2B9 76 aa6.18□□□□□ -1.42
CLK3-220ENST00000567992 Q8IZM0 81 aa6.17□□□□□ -1.42
CLK3-220ENST00000567992 FLG2Q5D862 2391 aaPredicted RBP6.17□□□□□ -1.42
CLK3-220ENST00000567992 HERC1Q15751 4861 aa6.17□□□□□ -1.42
CLK3-220ENST00000567992 ATP5LO75964 103 aa6.16□□□□□ -1.42
CLK3-220ENST00000567992 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
CLK3-220ENST00000567992 TLX1NBP0CAT3 122 aa6.16□□□□□ -1.42
CLK3-220ENST00000567992 INAFM2P0DMQ5 153 aa6.16□□□□□ -1.42
CLK3-220ENST00000567992 GAGE2BQ13066 116 aa6.16□□□□□ -1.42
CLK3-220ENST00000567992 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
CLK3-220ENST00000567992 STPG4Q8N801 248 aa6.16□□□□□ -1.42
CLK3-220ENST00000567992 IFI27L1Q96BM0 104 aa6.16□□□□□ -1.42
CLK3-220ENST00000567992 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
CLK3-220ENST00000567992 TRBV30A0A0K0K1B3 111 aa6.15□□□□□ -1.42
CLK3-220ENST00000567992 COX8AP10176 69 aa6.15□□□□□ -1.42
CLK3-220ENST00000567992 RPL18AQ02543 176 aaKnown RBP6.15□□□□□ -1.42
CLK3-220ENST00000567992 Q6ZRP5 223 aa6.15□□□□□ -1.42
CLK3-220ENST00000567992 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.42
CLK3-220ENST00000567992 CBY1Q9Y3M2 126 aa6.15□□□□□ -1.42
CLK3-220ENST00000567992 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
CLK3-220ENST00000567992 A0A1W2PNN7 141 aa6.14□□□□□ -1.43
CLK3-220ENST00000567992 C11orf86A6NJI1 115 aa6.14□□□□□ -1.43
CLK3-220ENST00000567992 DLEU1O43261 78 aa6.14□□□□□ -1.43
CLK3-220ENST00000567992 SPINK8P0C7L1 97 aa6.14□□□□□ -1.43
CLK3-220ENST00000567992 ZNF22P17026 224 aaPredicted RBP6.14□□□□□ -1.43
CLK3-220ENST00000567992 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
CLK3-220ENST00000567992 RPL37AP61513 92 aaKnown RBP6.14□□□□□ -1.43
CLK3-220ENST00000567992 BATFQ16520 125 aa6.14□□□□□ -1.43
CLK3-220ENST00000567992 C9orf116Q5BN46 136 aaPredicted RBP6.14□□□□□ -1.43
CLK3-220ENST00000567992 DPH3Q96FX2 82 aa6.14□□□□□ -1.43
CLK3-220ENST00000567992 TRAV12-1A0A0B4J245 112 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms