RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 Q8N377 158 aa4.7□□□□□ -1.66
SMPD3-206ENST00000566009 FAM19A2Q8N3H0 131 aa4.7□□□□□ -1.66
SMPD3-206ENST00000566009 Q8NBF4 154 aa4.7□□□□□ -1.66
SMPD3-206ENST00000566009 C6orf48Q9UBA6 75 aa4.7□□□□□ -1.66
SMPD3-206ENST00000566009 SDHAF1A6NFY7 115 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 HIGD1CA8MV81 97 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 H7C423 109 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 I3L3M4 83 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 NCR2O95944 276 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 RAB4AP20338 218 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 UBE2AP49459 152 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 RIGQ13278 110 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 UNQ6190/PRO20217Q6UXQ8 127 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 RPL39LQ96EH5 51 aaKnown RBP4.69□□□□□ -1.66
SMPD3-206ENST00000566009 TMEM191AQ9H0A3 160 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 NAT8Q9UHE5 227 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 V9GYV3 84 aa4.69□□□□□ -1.66
SMPD3-206ENST00000566009 TRBV6-5A0A0K0K1A5 114 aa4.68□□□□□ -1.66
SMPD3-206ENST00000566009 NDUFA1O15239 70 aa4.68□□□□□ -1.66
SMPD3-206ENST00000566009 PNRC1Q12796 327 aaPredicted RBP4.68□□□□□ -1.66
SMPD3-206ENST00000566009 ADIRFQ15847 76 aa4.68□□□□□ -1.66
SMPD3-206ENST00000566009 C5orf38Q86SI9 138 aa4.68□□□□□ -1.66
SMPD3-206ENST00000566009 ST20Q9HBF5 79 aa4.68□□□□□ -1.66
SMPD3-206ENST00000566009 F8WDY8 70 aa4.67□□□□□ -1.66
SMPD3-206ENST00000566009 ZNF25P17030 456 aaPredicted RBP4.67□□□□□ -1.66
SMPD3-206ENST00000566009 POLR2KP53803 58 aaKnown RBP4.67□□□□□ -1.66
SMPD3-206ENST00000566009 BTF3L4Q96K17 158 aa4.67□□□□□ -1.66
SMPD3-206ENST00000566009 TMEM242Q9NWH2 141 aa4.67□□□□□ -1.66
SMPD3-206ENST00000566009 NAT8BQ9UHF3 227 aa4.67□□□□□ -1.66
SMPD3-206ENST00000566009 SMIM27A0A1W2PRY6 76 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 C9orf92A6NGG3 77 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 C5orf52A6NGY3 159 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 IFITM10A6NMD0 228 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 C1orf196B1AJZ1 125 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 VCYO14598 125 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 SLC25A20O43772 301 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 PPP1R17O96001 155 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 APCSP02743 223 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 SNRPEP62304 92 aaKnown RBP4.66□□□□□ -1.66
SMPD3-206ENST00000566009 AMN1Q8IY45 258 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 MRAP2Q96G30 205 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 TMEM101Q96IK0 257 aa4.66□□□□□ -1.66
SMPD3-206ENST00000566009 TRBV24-1A0A075B6N3 115 aa4.65□□□□□ -1.67
SMPD3-206ENST00000566009 TRBV27A0A0K0K1C4 114 aa4.65□□□□□ -1.67
SMPD3-206ENST00000566009 RAB5BP61020 215 aa4.65□□□□□ -1.67
SMPD3-206ENST00000566009 MRPL55Q7Z7F7 128 aaKnown RBP4.65□□□□□ -1.67
SMPD3-206ENST00000566009 OR10D4PQ8NGN7 298 aa4.65□□□□□ -1.67
SMPD3-206ENST00000566009 PACRGQ96M98 296 aaPredicted RBP4.65□□□□□ -1.67
SMPD3-206ENST00000566009 A0A1B0GW15 77 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 RPL37AP8A6NKH3 93 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 NDUFC2-KCTD14E9PQ53 114 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST1H2BKO60814 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 TRGC2P03986 189 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST1H2BJP06899 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST1H2BOP23527 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST1H2BBP33778 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST1H2BDP58876 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST1H2BCP62807 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST2H2BEQ16778 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 MRPL51Q4U2R6 128 aaKnown RBP4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.64□□□□□ -1.67
SMPD3-206ENST00000566009 FAM104BQ5XKR9 115 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 LINC00518Q8N0U6 118 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST1H2BHQ93079 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 PLEKHB2Q96CS7 222 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST1H2BNQ99877 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 HIST1H2BMQ99879 126 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 CDC42SE2Q9NRR3 84 aa4.64□□□□□ -1.67
SMPD3-206ENST00000566009 SMKR1H3BMG3 65 aa4.63□□□□□ -1.67
SMPD3-206ENST00000566009 PPP1R2P9O14990 202 aa4.63□□□□□ -1.67
SMPD3-206ENST00000566009 S100A8P05109 93 aa4.63□□□□□ -1.67
SMPD3-206ENST00000566009 FCER1GP30273 86 aa4.63□□□□□ -1.67
SMPD3-206ENST00000566009 CKS2P33552 79 aa4.63□□□□□ -1.67
SMPD3-206ENST00000566009 SUMO2P61956 95 aaKnown RBP4.63□□□□□ -1.67
SMPD3-206ENST00000566009 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
SMPD3-206ENST00000566009 NRACQ8N912 160 aa4.63□□□□□ -1.67
SMPD3-206ENST00000566009 ORAOV1Q8WV07 137 aa4.63□□□□□ -1.67
SMPD3-206ENST00000566009 ANAPC16Q96DE5 110 aa4.63□□□□□ -1.67
SMPD3-206ENST00000566009 NDUFA6P56556 154 aa4.62□□□□□ -1.67
SMPD3-206ENST00000566009 SMAGPQ0VAQ4 97 aa4.62□□□□□ -1.67
SMPD3-206ENST00000566009 FABP9Q0Z7S8 132 aa4.62□□□□□ -1.67
SMPD3-206ENST00000566009 MRPL52Q86TS9 123 aaKnown RBP4.62□□□□□ -1.67
SMPD3-206ENST00000566009 LINC00167Q96N53 147 aa4.62□□□□□ -1.67
SMPD3-206ENST00000566009 C20orf78Q9BR46 151 aa4.62□□□□□ -1.67
SMPD3-206ENST00000566009 TP73-AS1Q9UF72 201 aa4.62□□□□□ -1.67
SMPD3-206ENST00000566009 CSDC2Q9Y534 153 aaKnown RBP4.62□□□□□ -1.67
SMPD3-206ENST00000566009 HBBP68871 147 aa4.61□□□□□ -1.67
SMPD3-206ENST00000566009 PRLHP81277 87 aa4.61□□□□□ -1.67
SMPD3-206ENST00000566009 MRPL54Q6P161 138 aaKnown RBP4.61□□□□□ -1.67
SMPD3-206ENST00000566009 HIST3H2BBQ8N257 126 aa4.61□□□□□ -1.67
SMPD3-206ENST00000566009 TMEM18Q96B42 140 aa4.61□□□□□ -1.67
SMPD3-206ENST00000566009 TCAPO15273 167 aa4.6□□□□□ -1.67
SMPD3-206ENST00000566009 PPBPP02775 128 aa4.6□□□□□ -1.67
SMPD3-206ENST00000566009 AKR1D1P51857 326 aa4.6□□□□□ -1.67
SMPD3-206ENST00000566009 RPL32P62910 135 aaKnown RBP4.6□□□□□ -1.67
SMPD3-206ENST00000566009 TMEM136Q6ZRR5 245 aa4.6□□□□□ -1.67
SMPD3-206ENST00000566009 TIMM21Q9BVV7 248 aa4.6□□□□□ -1.67
SMPD3-206ENST00000566009 A0A1B0GXF2 115 aa4.59□□□□□ -1.67
SMPD3-206ENST00000566009 D6R8Y8 96 aa4.59□□□□□ -1.67
SMPD3-206ENST00000566009 S100PP25815 95 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms