RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 A0A1W2PNN7 141 aa12.4□□□□□ -0.42
CMTM3-211ENST00000565922 NDUFC2-KCTD14E9PQ53 114 aa12.4□□□□□ -0.42
CMTM3-211ENST00000565922 HBDP02042 147 aa12.4□□□□□ -0.42
CMTM3-211ENST00000565922 CXCL5P42830 114 aa12.4□□□□□ -0.42
CMTM3-211ENST00000565922 PKHD1L1Q86WI1 4243 aa12.39□□□□□ -0.43
CMTM3-211ENST00000565922 IGLV5-45A0A087WSX0 123 aa12.38□□□□□ -0.43
CMTM3-211ENST00000565922 GAGE2EQ4V326 116 aa12.38□□□□□ -0.43
CMTM3-211ENST00000565922 PDZD11Q5EBL8 140 aa12.38□□□□□ -0.43
CMTM3-211ENST00000565922 YPEL4Q96NS1 127 aa12.38□□□□□ -0.43
CMTM3-211ENST00000565922 GAGE2DQ9UEU5 116 aa12.38□□□□□ -0.43
CMTM3-211ENST00000565922 URB1-AS1Q96HZ7 61 aa12.37□□□□□ -0.43
CMTM3-211ENST00000565922 A0A096LNJ9 63 aa12.36□□□□□ -0.43
CMTM3-211ENST00000565922 H3BRM9 83 aa12.36□□□□□ -0.43
CMTM3-211ENST00000565922 ATP5LO75964 103 aa12.36□□□□□ -0.43
CMTM3-211ENST00000565922 SMIM1B2RUZ4 78 aa12.35□□□□□ -0.43
CMTM3-211ENST00000565922 F8VRH5 84 aa12.35□□□□□ -0.43
CMTM3-211ENST00000565922 NDUFA6P56556 154 aa12.34□□□□□ -0.43
CMTM3-211ENST00000565922 LRP1Q07954 4544 aaKnown RBP12.33□□□□□ -0.44
CMTM3-211ENST00000565922 COX7B2Q8TF08 81 aa12.33□□□□□ -0.44
CMTM3-211ENST00000565922 CHCHD1Q96BP2 118 aaKnown RBP12.33□□□□□ -0.44
CMTM3-211ENST00000565922 FAT3Q8TDW7 4589 aa12.33□□□□□ -0.44
CMTM3-211ENST00000565922 HERC1Q15751 4861 aa12.32□□□□□ -0.44
CMTM3-211ENST00000565922 IGLC3P0DOY3 106 aa12.32□□□□□ -0.44
CMTM3-211ENST00000565922 PMCHL1Q16048 86 aa12.32□□□□□ -0.44
CMTM3-211ENST00000565922 SPINK6Q6UWN8 80 aa12.32□□□□□ -0.44
CMTM3-211ENST00000565922 PHF5AQ7RTV0 110 aaKnown RBP12.32□□□□□ -0.44
CMTM3-211ENST00000565922 CBLN2Q8IUK8 224 aa12.32□□□□□ -0.44
CMTM3-211ENST00000565922 FAM19A5Q7Z5A7 132 aaPredicted RBP12.31□□□□□ -0.44
CMTM3-211ENST00000565922 FAM168BA1KXE4 195 aa12.3□□□□□ -0.44
CMTM3-211ENST00000565922 SPINK8P0C7L1 97 aa12.3□□□□□ -0.44
CMTM3-211ENST00000565922 SLC7A5P1Q8MH63 180 aa12.29□□□□□ -0.44
CMTM3-211ENST00000565922 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
CMTM3-211ENST00000565922 M0QXV9 152 aa12.28□□□□□ -0.44
CMTM3-211ENST00000565922 C9orf129Q5T035 196 aaKnown RBP12.28□□□□□ -0.44
CMTM3-211ENST00000565922 REG3GQ6UW15 175 aa12.27□□□□□ -0.45
CMTM3-211ENST00000565922 BAGE3Q86Y29 109 aa12.27□□□□□ -0.45
CMTM3-211ENST00000565922 C1orf137Q5JT78 98 aa12.26□□□□□ -0.45
CMTM3-211ENST00000565922 HSBP1O75506 76 aa12.25□□□□□ -0.45
CMTM3-211ENST00000565922 ZNF22P17026 224 aaPredicted RBP12.25□□□□□ -0.45
CMTM3-211ENST00000565922 UBE2BP63146 152 aa12.25□□□□□ -0.45
CMTM3-211ENST00000565922 SERTAD4-AS1Q5TG53 156 aa12.25□□□□□ -0.45
CMTM3-211ENST00000565922 TRGC2P03986 189 aa12.24□□□□□ -0.45
CMTM3-211ENST00000565922 SRSF9Q13242 221 aaKnown RBP eCLIP12.24□□□□□ -0.45
CMTM3-211ENST00000565922 IGLV5-39A0A0G2JS06 123 aa12.23□□□□□ -0.45
CMTM3-211ENST00000565922 ODF1Q14990 250 aa12.23□□□□□ -0.45
CMTM3-211ENST00000565922 IFI27L1Q96BM0 104 aa12.23□□□□□ -0.45
CMTM3-211ENST00000565922 XAGE1AQ9HD64 81 aa12.23□□□□□ -0.45
CMTM3-211ENST00000565922 TMEM170BQ5T4T1 132 aa12.22□□□□□ -0.45
CMTM3-211ENST00000565922 SFTA2Q6UW10 78 aa12.22□□□□□ -0.45
CMTM3-211ENST00000565922 KRTAP7-1Q8IUC3 87 aa12.22□□□□□ -0.45
CMTM3-211ENST00000565922 CHTOPQ9Y3Y2 248 aaKnown RBP12.22□□□□□ -0.45
CMTM3-211ENST00000565922 TRAV12-1A0A0B4J245 112 aa12.21□□□□□ -0.45
CMTM3-211ENST00000565922 C11orf86A6NJI1 115 aa12.21□□□□□ -0.45
CMTM3-211ENST00000565922 LINC01600Q96MT4 127 aa12.21□□□□□ -0.45
CMTM3-211ENST00000565922 MT1HL1P0DM35 61 aa12.2□□□□□ -0.46
CMTM3-211ENST00000565922 LBHQ53QV2 105 aaPredicted RBP12.2□□□□□ -0.46
CMTM3-211ENST00000565922 IGLV7-43P04211 117 aa12.19□□□□□ -0.46
CMTM3-211ENST00000565922 TP73-AS1Q9UF72 201 aa12.19□□□□□ -0.46
CMTM3-211ENST00000565922 C22orf24Q9Y442 160 aa12.18□□□□□ -0.46
CMTM3-211ENST00000565922 PLA2G2DQ9UNK4 145 aa12.17□□□□□ -0.46
CMTM3-211ENST00000565922 COX17Q14061 63 aa12.16□□□□□ -0.46
CMTM3-211ENST00000565922 FAM19A2Q8N3H0 131 aa12.16□□□□□ -0.46
CMTM3-211ENST00000565922 DIRC1Q969H9 104 aa12.16□□□□□ -0.46
CMTM3-211ENST00000565922 COLCA2A8K830 154 aa12.15□□□□□ -0.46
CMTM3-211ENST00000565922 LEPROTL1O95214 131 aa12.15□□□□□ -0.46
CMTM3-211ENST00000565922 MRPL55Q7Z7F7 128 aaKnown RBP12.15□□□□□ -0.46
CMTM3-211ENST00000565922 KRTAP11-1Q8IUC1 163 aa12.15□□□□□ -0.46
CMTM3-211ENST00000565922 NUPR1O60356 82 aa12.14□□□□□ -0.47
CMTM3-211ENST00000565922 SERF1AO75920 110 aa12.14□□□□□ -0.47
CMTM3-211ENST00000565922 PFN2P35080 140 aa12.13□□□□□ -0.47
CMTM3-211ENST00000565922 ERG28Q9UKR5 140 aa12.13□□□□□ -0.47
CMTM3-211ENST00000565922 HSPB8Q9UJY1 196 aa12.12□□□□□ -0.47
CMTM3-211ENST00000565922 TMEM223A0PJW6 202 aa12.11□□□□□ -0.47
CMTM3-211ENST00000565922 NKAPP1Q8N9T2 125 aa12.11□□□□□ -0.47
CMTM3-211ENST00000565922 IGLV5-37A0A075B6J1 123 aa12.1□□□□□ -0.47
CMTM3-211ENST00000565922 H0Y9J4 135 aa12.1□□□□□ -0.47
CMTM3-211ENST00000565922 LINC00310P59036 64 aa12.09□□□□□ -0.47
CMTM3-211ENST00000565922 ZNF625Q96I27 306 aaPredicted RBP12.09□□□□□ -0.47
CMTM3-211ENST00000565922 H0Y8G0 127 aa12.08□□□□□ -0.48
CMTM3-211ENST00000565922 SND1-IT1Q9HBX3 110 aa12.07□□□□□ -0.48
CMTM3-211ENST00000565922 PLNP26678 52 aa12.06□□□□□ -0.48
CMTM3-211ENST00000565922 KRTAP10-8P60410 259 aa12.06□□□□□ -0.48
CMTM3-211ENST00000565922 RPL24P83731 157 aaKnown RBP12.06□□□□□ -0.48
CMTM3-211ENST00000565922 LINC00167Q96N53 147 aa12.06□□□□□ -0.48
CMTM3-211ENST00000565922 ZNF861PO60384 105 aa12.05□□□□□ -0.48
CMTM3-211ENST00000565922 HERV-K104P63124 156 aa12.04□□□□□ -0.48
CMTM3-211ENST00000565922 TNXBP22105 4242 aa12.03□□□□□ -0.48
CMTM3-211ENST00000565922 LINC00587B1AMM8 73 aa12.03□□□□□ -0.48
CMTM3-211ENST00000565922 BCE1O60756 84 aa12.03□□□□□ -0.48
CMTM3-211ENST00000565922 FABP4P15090 132 aa12.03□□□□□ -0.48
CMTM3-211ENST00000565922 LINC00158P58513 81 aa12.03□□□□□ -0.48
CMTM3-211ENST00000565922 GAGE10A6NGK3 116 aa12.02□□□□□ -0.49
CMTM3-211ENST00000565922 RPL37AP8A6NKH3 93 aa12.02□□□□□ -0.49
CMTM3-211ENST00000565922 RPL28P46779 137 aaKnown RBP12.02□□□□□ -0.49
CMTM3-211ENST00000565922 MAP1LC3CQ9BXW4 147 aa12.02□□□□□ -0.49
CMTM3-211ENST00000565922 ATP6V1G1O75348 118 aa12.01□□□□□ -0.49
CMTM3-211ENST00000565922 SCO1O75880 301 aa12.01□□□□□ -0.49
CMTM3-211ENST00000565922 DPM2O94777 84 aa12.01□□□□□ -0.49
CMTM3-211ENST00000565922 HERVK_113P61574 105 aa12.01□□□□□ -0.49
CMTM3-211ENST00000565922 MEIG1Q5JSS6 88 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms