RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 LINC00526Q96FQ7 95 aa5.1□□□□□ -1.59
CDH1-208ENST00000565810 CARD19Q96LW7 228 aa5.1□□□□□ -1.59
CDH1-208ENST00000565810 PGPEP1Q9NXJ5 209 aa5.1□□□□□ -1.59
CDH1-208ENST00000565810 IGLV5-52A0A0A0MRZ9 124 aa5.09□□□□□ -1.59
CDH1-208ENST00000565810 MYMXA0A1B0GTQ4 84 aa5.09□□□□□ -1.59
CDH1-208ENST00000565810 J3QQQ9 107 aa5.09□□□□□ -1.59
CDH1-208ENST00000565810 NMUP48645 174 aa5.09□□□□□ -1.59
CDH1-208ENST00000565810 CNBPP62633 177 aaKnown RBP5.09□□□□□ -1.59
CDH1-208ENST00000565810 PYY3Q5JQD4 70 aa5.09□□□□□ -1.59
CDH1-208ENST00000565810 VAMP8Q9BV40 100 aa5.09□□□□□ -1.59
CDH1-208ENST00000565810 PKIGQ9Y2B9 76 aa5.09□□□□□ -1.59
CDH1-208ENST00000565810 TRBV30A0A0K0K1B3 111 aa5.08□□□□□ -1.6
CDH1-208ENST00000565810 LINC00587B1AMM8 73 aa5.08□□□□□ -1.6
CDH1-208ENST00000565810 S100A12P80511 92 aa5.08□□□□□ -1.6
CDH1-208ENST00000565810 ANKRD39Q53RE8 183 aa5.08□□□□□ -1.6
CDH1-208ENST00000565810 UNQ6190/PRO20217Q6UXQ8 127 aa5.08□□□□□ -1.6
CDH1-208ENST00000565810 Q6ZRU5 148 aa5.08□□□□□ -1.6
CDH1-208ENST00000565810 NDUFA12Q9UI09 145 aa5.08□□□□□ -1.6
CDH1-208ENST00000565810 HECTD4Q9Y4D8 3996 aa5.08□□□□□ -1.6
CDH1-208ENST00000565810 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
CDH1-208ENST00000565810 LOC105371267A0A1B0GV96 52 aa5.07□□□□□ -1.6
CDH1-208ENST00000565810 SLPIP03973 132 aa5.07□□□□□ -1.6
CDH1-208ENST00000565810 HERV-K104P63124 156 aa5.07□□□□□ -1.6
CDH1-208ENST00000565810 RNF151Q2KHN1 245 aa5.07□□□□□ -1.6
CDH1-208ENST00000565810 CDPF1Q6NVV7 123 aa5.07□□□□□ -1.6
CDH1-208ENST00000565810 C2orf82Q6UX34 121 aa5.07□□□□□ -1.6
CDH1-208ENST00000565810 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
CDH1-208ENST00000565810 PAM16Q9Y3D7 125 aa5.07□□□□□ -1.6
CDH1-208ENST00000565810 ZNF815PA8K554 130 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 TSPEAR-AS2P59090 65 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 CIRBPQ14011 172 aaKnown RBP5.06□□□□□ -1.6
CDH1-208ENST00000565810 MAJINQ3KP22 176 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 SPATA45Q537H7 98 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 MEIG1Q5JSS6 88 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 C10orf25Q5T742 122 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 C9orf163Q8N9P6 203 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 ZNF625Q96I27 306 aaPredicted RBP5.06□□□□□ -1.6
CDH1-208ENST00000565810 C6orf48Q9UBA6 75 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 DYNC1H1Q14204 4646 aaKnown RBP5.06□□□□□ -1.6
CDH1-208ENST00000565810 LRP1BQ9NZR2 4599 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 PKD1P98161 4303 aa5.06□□□□□ -1.6
CDH1-208ENST00000565810 IGKV2D-26A0A0A0MRZ7 120 aa5.05□□□□□ -1.6
CDH1-208ENST00000565810 SMIM6P0DI80 62 aa5.05□□□□□ -1.6
CDH1-208ENST00000565810 GCSHP23434 173 aa5.05□□□□□ -1.6
CDH1-208ENST00000565810 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
CDH1-208ENST00000565810 DNAH8Q96JB1 4490 aa5.05□□□□□ -1.6
CDH1-208ENST00000565810 LOC107984640A0A0U1RRK4 108 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 A0A1B0GVY2 172 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 C16orf90A8MZG2 172 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 TLX1NBP0CAT3 122 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 FUSP35637 526 aaKnown RBP eCLIP5.04□□□□□ -1.6
CDH1-208ENST00000565810 LINC00158P58513 81 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 RPL18AQ02543 176 aaKnown RBP5.04□□□□□ -1.6
CDH1-208ENST00000565810 GAGE2BQ13066 116 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 COX17Q14061 63 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 C9orf116Q5BN46 136 aaPredicted RBP5.04□□□□□ -1.6
CDH1-208ENST00000565810 SCGB1D4Q6XE38 83 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 PCP2Q8IVA1 136 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 ERG28Q9UKR5 140 aa5.04□□□□□ -1.6
CDH1-208ENST00000565810 NDUFC2-KCTD14E9PQ53 114 aa5.03□□□□□ -1.6
CDH1-208ENST00000565810 COX8AP10176 69 aa5.03□□□□□ -1.6
CDH1-208ENST00000565810 PFN2P35080 140 aa5.03□□□□□ -1.6
CDH1-208ENST00000565810 DPH3Q96FX2 82 aa5.03□□□□□ -1.6
CDH1-208ENST00000565810 LINC00474Q9P2X8 69 aa5.03□□□□□ -1.6
CDH1-208ENST00000565810 A0A0J9YXY3 114 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 A0A0U1RRA0 63 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 SMIM13P0DJ93 91 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 LINC01620Q4KN68 170 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 GAGE2EQ4V326 116 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 SLC25A34Q6PIV7 304 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 SDIM1Q6ZPB5 146 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 C14orf144Q96I85 54 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 TTTY13Q9BZ97 58 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 GAGE2DQ9UEU5 116 aa5.02□□□□□ -1.61
CDH1-208ENST00000565810 PKHD1P08F94 4074 aa5.01□□□□□ -1.61
CDH1-208ENST00000565810 IGKV2-24A0A0C4DH68 120 aa5.01□□□□□ -1.61
CDH1-208ENST00000565810 TMEM238C9JI98 176 aa5.01□□□□□ -1.61
CDH1-208ENST00000565810 DLEU1O43261 78 aa5.01□□□□□ -1.61
CDH1-208ENST00000565810 TIMM17BO60830 172 aa5.01□□□□□ -1.61
CDH1-208ENST00000565810 Q6ZRP5 223 aa5.01□□□□□ -1.61
CDH1-208ENST00000565810 BOD1L2Q8IYS8 172 aa5.01□□□□□ -1.61
CDH1-208ENST00000565810 PTTG1IPP53801 180 aa5□□□□□ -1.61
CDH1-208ENST00000565810 MIR7-3HGQ8N6C7 128 aa5□□□□□ -1.61
CDH1-208ENST00000565810 COPS9Q8WXC6 57 aa5□□□□□ -1.61
CDH1-208ENST00000565810 C12orf57Q99622 126 aa5□□□□□ -1.61
CDH1-208ENST00000565810 MIEN1Q9BRT3 115 aa5□□□□□ -1.61
CDH1-208ENST00000565810 A0A096LNI7 61 aa4.99□□□□□ -1.61
CDH1-208ENST00000565810 KRTAP10-1P60331 282 aa4.99□□□□□ -1.61
CDH1-208ENST00000565810 SRSF9Q13242 221 aaKnown RBP eCLIP4.99□□□□□ -1.61
CDH1-208ENST00000565810 Q6ZVH6 145 aa4.99□□□□□ -1.61
CDH1-208ENST00000565810 SND1-IT1Q9HBX3 110 aa4.99□□□□□ -1.61
CDH1-208ENST00000565810 XAGE1AQ9HD64 81 aa4.99□□□□□ -1.61
CDH1-208ENST00000565810 UQCR10Q9UDW1 63 aa4.99□□□□□ -1.61
CDH1-208ENST00000565810 DAND5Q8N907 189 aa4.98□□□□□ -1.61
CDH1-208ENST00000565810 TSTD3H0UI37 97 aa4.97□□□□□ -1.61
CDH1-208ENST00000565810 CHTF8P0CG12 524 aa4.97□□□□□ -1.61
CDH1-208ENST00000565810 IFITM1P13164 125 aa4.97□□□□□ -1.61
CDH1-208ENST00000565810 RPL24P83731 157 aaKnown RBP4.97□□□□□ -1.61
CDH1-208ENST00000565810 ADAMTSL4-AS1Q5T5F5 129 aa4.97□□□□□ -1.61
CDH1-208ENST00000565810 LINC00518Q8N0U6 118 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms