RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 EPM2AB3EWF7 344 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 HCRTO43612 131 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 CGAP01215 116 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 DEFB116Q30KQ4 102 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 ZCCHC23Q6ZST2 131 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 ZNF826PQ6ZT77 177 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 V9GYH0 126 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 TRAV23DV6A0A075B6W5 121 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 PLGLAQ15195 96 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 FAM104AQ969W3 186 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 INTS1Q8N201 2190 aaKnown RBP2.08□□□□□ -2.08
CHD9-216ENST00000565803 TLN2Q9Y4G6 2542 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 IGHV1-18A0A0C4DH31 117 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 PROP1O75360 226 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 ERC2-IT1O76042 136 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 ROMO1P60602 79 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 SPANXN5Q5MJ07 72 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 BPESC1Q9GZL8 116 aa2.08□□□□□ -2.08
CHD9-216ENST00000565803 IGHV3-15A0A0B4J1V0 119 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 A0A0J9YX75 114 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 TMEM190Q8WZ59 177 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 PRO0461Q9UI25 63 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 ARFGEF3Q5TH69 2177 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 MED12Q93074 2177 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 KIAA1549Q9HCM3 1950 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 ARHGAP32A7KAX9 2087 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 E7EQL1 145 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 IGLV7-43P04211 117 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 ZNF575Q86XF7 245 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 Q8N377 158 aa2.07□□□□□ -2.08
CHD9-216ENST00000565803 C16orf90A8MZG2 172 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 KRTAP4-16G5E9R7 235 aaPredicted RBP2.06□□□□□ -2.08
CHD9-216ENST00000565803 HMGN2P05204 90 aaKnown RBP2.06□□□□□ -2.08
CHD9-216ENST00000565803 CFC1P0CG37 223 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 DSCR4P56555 118 aaPredicted RBP2.06□□□□□ -2.08
CHD9-216ENST00000565803 CYP4F30PQ9H0H9 118 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 PRR14LQ5THK1 2151 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 TGP01266 2768 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 IGLV3-12A0A075B6K2 115 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 IGKV1OR2-108A0A075B7D4 117 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 SDHAF1A6NFY7 115 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 CPSF4O95639 269 aaKnown RBP2.06□□□□□ -2.08
CHD9-216ENST00000565803 PPP1R17O96001 155 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 IGHV3-53P01767 116 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 Q1T7F1 81 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 LYPD5Q6UWN5 251 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 C9orf47Q6ZRZ4 202 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 Q6ZTC4 211 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 IMMP1LQ96LU5 166 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 PSENENQ9NZ42 101 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 CACNA1CQ13936 2221 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 H7C423 109 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 COX6CP09669 75 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 DNAH10OSP0CZ25 163 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 SMIM29Q86T20 159 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 LIMD2Q9BT23 127 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 PRR15LQ9BU68 103 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 CYSTM1Q9H1C7 97 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 NBEAL2Q6ZNJ1 2754 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 SEC16AO15027 2179 aa2.06□□□□□ -2.08
CHD9-216ENST00000565803 TRBV7-3A0A075B6L6 115 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 LRCOL1A6NCL2 159 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 LHBP01229 141 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 IGLV1-51P01701 117 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 ATXN8Q156A1 80 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 Q8N1X5 172 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 CCL4L1Q8NHW4 92 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 SNURFQ9Y675 71 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 DNAH9Q9NYC9 4486 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 TRAV22A0A0B4J277 110 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 H7BZZ5 65 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 S100A3P33764 101 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 IFI27P40305 119 aaPredicted RBP2.05□□□□□ -2.08
CHD9-216ENST00000565803 HIGD2BQ4VC39 106 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 LCE5AQ5TCM9 118 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 LITAFQ99732 161 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 FAM215AQ9Y5M1 114 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 AGRNO00468 2067 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 IGKV3-11P04433 115 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 RPL36AP83881 106 aaKnown RBP2.05□□□□□ -2.08
CHD9-216ENST00000565803 Q8TAT8 98 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 PPP1R1CQ8WVI7 109 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
CHD9-216ENST00000565803 IGLV3-16A0A075B6K0 115 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 A8MUU9 505 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 CD24P25063 80 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 IGLV3-21P80748 117 aaPredicted RBP2.04□□□□□ -2.08
CHD9-216ENST00000565803 SPAG11BQ08648 103 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 SPAG11AQ6PDA7 123 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 PKHD1P08F94 4074 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.04□□□□□ -2.081e-6■■■■□ 25.3
CHD9-216ENST00000565803 IGKV1D-37A0A075B6S9 117 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 A0A0J9YWU9 116 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 IBA57-AS1B1ANH7 110 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 BAALC-AS2P0C853 105 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 P0C879 139 aa2.04□□□□□ -2.08
CHD9-216ENST00000565803 C9orf129Q5T035 196 aaKnown RBP2.04□□□□□ -2.08
CHD9-216ENST00000565803 C1orf147Q96MC9 270 aaPredicted RBP2.04□□□□□ -2.08
CHD9-216ENST00000565803 ORMDL1Q9P0S3 153 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms