RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 LINC00575Q6W349 94 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 BRK1Q8WUW1 75 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 SMIM4Q8WVI0 70 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 ARL11Q969Q4 196 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 PRELID3AQ96N28 172 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 CACNA1HO95180 2353 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 EPG5Q9HCE0 2579 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 HECTD1Q9ULT8 2610 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 ITPR3Q14573 2671 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 ZANQ9Y493 2812 aa0.77□□□□□ -2.29
CHD9-215ENST00000565442 CMYA5Q8N3K9 4069 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 CENPEQ02224 2701 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 ANKRD17O75179 2603 aaKnown RBP0.76□□□□□ -2.29
CHD9-215ENST00000565442 FAM186AA6NE01 2351 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 FXYD6-FXYD2A0A087WZ82 144 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 TRAV1-2A0A0B4J238 106 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 A0A1B0GV90 55 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 SMIM31A0A1B0GVY4 71 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 TMEM30CPA0ZSE6 113 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 FAM24AA6NFZ4 105 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 DLEU1O43261 78 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 PITX3O75364 302 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 MPC2O95563 127 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 HBDP02042 147 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 MT-ND6P03923 174 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 AKAIN1P0CW23 69 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 PYYP10082 97 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 SLC25A4P12235 298 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 HLA-DRB4P13762 266 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 ETV6P41212 452 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 PCBD1P61457 104 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 WT1-ASQ06250 92 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 ALKAL2Q6UX46 152 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 TOMM5Q8N4H5 51 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 OR4B1Q8NGF8 309 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 S100A13Q99584 98 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 C2orf88Q9BSF0 95 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 NAA60Q9H7X0 242 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 NOP16Q9Y3C1 178 aaKnown RBP0.76□□□□□ -2.29
CHD9-215ENST00000565442 HLA-DRB4X5D2U9 266 aa0.76□□□□□ -2.29
CHD9-215ENST00000565442 FASNP49327 2511 aaKnown RBP0.76□□□□□ -2.29
CHD9-215ENST00000565442 PTPRZ1P23471 2315 aaPredicted RBP0.76□□□□□ -2.29
CHD9-215ENST00000565442 FLNAP21333 2647 aaKnown RBP0.75□□□□□ -2.29
CHD9-215ENST00000565442 HIVEP3Q5T1R4 2406 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 DOPEY2Q9Y3R5 2298 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 C3orf85A0A1B0GTC6 90 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 CRYM-AS1A6NIL9 109 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 MCRIP1C9JLW8 97 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 F6UZH7 168 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 M0R2Z0 102 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 CORTO00230 105 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 PDCD5O14737 125 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 NPFFO15130 113 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 DEFB4AO15263 64 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 NDUFB6O95139 128 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 CYB5AP00167 134 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 FABP4P15090 132 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 ADCYAP1P18509 176 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 GUCA1AP43080 201 aaPredicted RBP0.75□□□□□ -2.29
CHD9-215ENST00000565442 MIR22HGQ0VDD5 57 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 MIC13Q5XKP0 118 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 RPL7L1Q6DKI1 246 aaKnown RBP0.75□□□□□ -2.29
CHD9-215ENST00000565442 FOXI2Q6ZQN5 318 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 C9orf62Q8N4C0 152 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 PP6455Q8WZ26 134 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 S100A16Q96FQ6 103 aaKnown RBP0.75□□□□□ -2.29
CHD9-215ENST00000565442 MGST2Q99735 147 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 SLC35B3Q9H1N7 401 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 FAIMQ9NVQ4 179 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 COA4Q9NYJ1 87 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 FKBP11Q9NYL4 201 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 ABRACLQ9P1F3 81 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 METTL1Q9UBP6 276 aaKnown RBP0.75□□□□□ -2.29
CHD9-215ENST00000565442 MPC1Q9Y5U8 109 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 ANK2Q01484 3957 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 TLN1Q9Y490 2541 aaKnown RBP0.75□□□□□ -2.29
CHD9-215ENST00000565442 FAM208BQ5VWN6 2430 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 CNOT1A5YKK6 2376 aaKnown RBP0.75□□□□□ -2.29
CHD9-215ENST00000565442 NAV3Q8IVL0 2385 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 AHCTF1Q8WYP5 2266 aa0.75□□□□□ -2.29
CHD9-215ENST00000565442 TEX15Q9BXT5 2789 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 TRAV12-2A0A075B6T6 113 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.74□□□□□ -2.29
CHD9-215ENST00000565442 FAM236AA0A1B0GUQ0 79 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 FAM236BA0A1B0GV22 79 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 IGLC7A0M8Q6 106 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 CLPSL1A2RUU4 121 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 CEBPZOSA8MTT3 80 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 F2Z2F3 143 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 K7EIM0 57 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 M0R3E3 92 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 SFT2D2O95562 160 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 TPT1P13693 172 aaKnown RBP0.74□□□□□ -2.29
CHD9-215ENST00000565442 FGF7P21781 194 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 ZNF137PP52743 207 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 TPPP2P59282 170 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 UBA52P62987 128 aaKnown RBP0.74□□□□□ -2.29
CHD9-215ENST00000565442 FXYD3Q14802 87 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 PLGLAQ15195 96 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms