RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 IGKV2-29A2NJV5 120 aaPredicted RBP7.88□□□□□ -1.15
TCF4-222ENST00000564228 CRPP02741 224 aa7.88□□□□□ -1.15
TCF4-222ENST00000564228 STAB1Q9NY15 2570 aa7.88□□□□□ -1.15
TCF4-222ENST00000564228 TRAV12-2A0A075B6T6 113 aa7.88□□□□□ -1.15
TCF4-222ENST00000564228 SMIM1B2RUZ4 78 aa7.88□□□□□ -1.15
TCF4-222ENST00000564228 EPM2AB3EWF7 344 aa7.88□□□□□ -1.15
TCF4-222ENST00000564228 SNRPD3P62318 126 aaKnown RBP7.88□□□□□ -1.15
TCF4-222ENST00000564228 Q9HAA7 133 aa7.88□□□□□ -1.15
TCF4-222ENST00000564228 NOTCH3Q9UM47 2321 aa7.87□□□□□ -1.15
TCF4-222ENST00000564228 C14orf132Q9NPU4 83 aa7.87□□□□□ -1.15
TCF4-222ENST00000564228 VWFP04275 2813 aa7.87□□□□□ -1.15
TCF4-222ENST00000564228 COL6A5A8TX70 2615 aa7.86□□□□□ -1.15
TCF4-222ENST00000564228 COX6A2Q02221 97 aa7.86□□□□□ -1.15
TCF4-222ENST00000564228 LINC00242Q5T6M2 205 aa7.86□□□□□ -1.15
TCF4-222ENST00000564228 IGHV3OR16-12A0A075B7B8 117 aa7.86□□□□□ -1.15
TCF4-222ENST00000564228 A0A087WVE0 104 aa7.86□□□□□ -1.15
TCF4-222ENST00000564228 SPINK13Q1W4C9 94 aa7.86□□□□□ -1.15
TCF4-222ENST00000564228 K7EQG2 157 aa7.85□□□□□ -1.15
TCF4-222ENST00000564228 BCE1O60756 84 aa7.85□□□□□ -1.15
TCF4-222ENST00000564228 FHL2Q14192 279 aa7.85□□□□□ -1.15
TCF4-222ENST00000564228 DEFB114Q30KQ6 69 aa7.85□□□□□ -1.15
TCF4-222ENST00000564228 DGAT2L7PQ6IED9 249 aa7.85□□□□□ -1.15
TCF4-222ENST00000564228 LINC00482Q8N8I6 264 aa7.84□□□□□ -1.15
TCF4-222ENST00000564228 PRO0628Q9UI54 55 aa7.84□□□□□ -1.15
TCF4-222ENST00000564228 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
TCF4-222ENST00000564228 A0A087WYN8 130 aa7.84□□□□□ -1.16
TCF4-222ENST00000564228 IGHV3-73A0A0B4J1V6 119 aa7.84□□□□□ -1.16
TCF4-222ENST00000564228 TRBV10-3A0A0K0K1G6 114 aa7.84□□□□□ -1.16
TCF4-222ENST00000564228 A0A0U1RRA0 63 aa7.84□□□□□ -1.16
TCF4-222ENST00000564228 FAM236DA0A1B0GTK5 79 aa7.84□□□□□ -1.16
TCF4-222ENST00000564228 IGHV3-53P01767 116 aa7.84□□□□□ -1.16
TCF4-222ENST00000564228 CCKP06307 115 aa7.84□□□□□ -1.16
TCF4-222ENST00000564228 FAM236CP0DP71 79 aa7.84□□□□□ -1.16
TCF4-222ENST00000564228 RS1O15537 224 aa7.83□□□□□ -1.16
TCF4-222ENST00000564228 IGKV3-20P01619 116 aa7.83□□□□□ -1.16
TCF4-222ENST00000564228 LINC00337Q8N6G1 96 aa7.83□□□□□ -1.16
TCF4-222ENST00000564228 RBMY1BA6NDE4 496 aaKnown RBP7.82□□□□□ -1.16
TCF4-222ENST00000564228 RBMY1EA6NEQ0 496 aaKnown RBP7.82□□□□□ -1.16
TCF4-222ENST00000564228 RBMY1DP0C7P1 496 aaKnown RBP7.82□□□□□ -1.16
TCF4-222ENST00000564228 RBMY1A1P0DJD3 496 aaKnown RBP7.82□□□□□ -1.16
TCF4-222ENST00000564228 RBMY1CP0DJD4 496 aa7.82□□□□□ -1.16
TCF4-222ENST00000564228 PFN2P35080 140 aa7.82□□□□□ -1.16
TCF4-222ENST00000564228 RBMY1FQ15415 496 aaKnown RBP7.82□□□□□ -1.16
TCF4-222ENST00000564228 C9orf129Q5T035 196 aaKnown RBP7.82□□□□□ -1.16
TCF4-222ENST00000564228 LYPD5Q6UWN5 251 aa7.82□□□□□ -1.16
TCF4-222ENST00000564228 SPATA3Q8NHX4 192 aa7.82□□□□□ -1.16
TCF4-222ENST00000564228 SMIM11BQ8TCY0 68 aa7.82□□□□□ -1.16
TCF4-222ENST00000564228 IGKV2-28A0A075B6P5 120 aa7.82□□□□□ -1.16
TCF4-222ENST00000564228 IGKV2D-28P01615 120 aa7.82□□□□□ -1.16
TCF4-222ENST00000564228 Q6ZSN1 163 aa7.82□□□□□ -1.16
TCF4-222ENST00000564228 TMEM243Q9BU79 118 aa7.82□□□□□ -1.16
TCF4-222ENST00000564228 A8MTW9 85 aa7.81□□□□□ -1.16
TCF4-222ENST00000564228 SND1-IT1Q9HBX3 110 aa7.81□□□□□ -1.16
TCF4-222ENST00000564228 JMJD7-PLA2G4BH0Y9G9 81 aa7.8□□□□□ -1.16
TCF4-222ENST00000564228 IGLV1-51P01701 117 aa7.8□□□□□ -1.16
TCF4-222ENST00000564228 ORMDL1Q9P0S3 153 aa7.8□□□□□ -1.16
TCF4-222ENST00000564228 Q9UF83 564 aa7.8□□□□□ -1.16
TCF4-222ENST00000564228 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
TCF4-222ENST00000564228 DEFB131AP59861 70 aa7.79□□□□□ -1.16
TCF4-222ENST00000564228 LINC00167Q96N53 147 aa7.79□□□□□ -1.16
TCF4-222ENST00000564228 IGHV3-38A0A0C4DH36 116 aa7.78□□□□□ -1.16
TCF4-222ENST00000564228 KNCNA6PVL3 124 aa7.78□□□□□ -1.16
TCF4-222ENST00000564228 NCR3O14931 201 aa7.78□□□□□ -1.16
TCF4-222ENST00000564228 LECT2O14960 151 aa7.78□□□□□ -1.16
TCF4-222ENST00000564228 XCL1P47992 114 aa7.78□□□□□ -1.16
TCF4-222ENST00000564228 XCL2Q9UBD3 114 aa7.78□□□□□ -1.16
TCF4-222ENST00000564228 C9orf66Q5T8R8 295 aa7.78□□□□□ -1.16
TCF4-222ENST00000564228 MIR7-3HGQ8N6C7 128 aa7.78□□□□□ -1.16
TCF4-222ENST00000564228 MAP6D1Q9H9H5 199 aa7.78□□□□□ -1.16
TCF4-222ENST00000564228 TRAV7A0A075B6U4 112 aa7.77□□□□□ -1.17
TCF4-222ENST00000564228 SS18Q15532 418 aa7.77□□□□□ -1.17
TCF4-222ENST00000564228 ODF3L2Q3SX64 289 aa7.76□□□□□ -1.17
TCF4-222ENST00000564228 C20orf197Q8N268 126 aa7.76□□□□□ -1.17
TCF4-222ENST00000564228 TRAV23DV6A0A075B6W5 121 aa7.76□□□□□ -1.17
TCF4-222ENST00000564228 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
TCF4-222ENST00000564228 H7BZZ5 65 aa7.76□□□□□ -1.17
TCF4-222ENST00000564228 COX7B2Q8TF08 81 aa7.76□□□□□ -1.17
TCF4-222ENST00000564228 CDC42SE2Q9NRR3 84 aa7.76□□□□□ -1.17
TCF4-222ENST00000564228 X6R8D5 127 aa7.76□□□□□ -1.17
TCF4-222ENST00000564228 RPL36AP83881 106 aaKnown RBP7.75□□□□□ -1.17
TCF4-222ENST00000564228 KLKP1Q107X0 134 aa7.75□□□□□ -1.17
TCF4-222ENST00000564228 RPL36ALQ969Q0 106 aaKnown RBP7.75□□□□□ -1.17
TCF4-222ENST00000564228 IBA57-AS1B1ANH7 110 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 F8WDY8 70 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 CCL18P55774 89 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 C11orf72Q8NBR9 251 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 WFDC9Q8NEX5 89 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 PKD1L1Q8TDX9 2849 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 TRBV10-1A0A0K0K1A3 114 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 LINC00336Q6ZUF6 198 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 UBL5Q9BZL1 73 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 WFDC10AQ9H1F0 79 aa7.74□□□□□ -1.17
TCF4-222ENST00000564228 HTN1P15515 57 aa7.73□□□□□ -1.17
TCF4-222ENST00000564228 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
TCF4-222ENST00000564228 ENHOQ6UWT2 76 aa7.72□□□□□ -1.17
TCF4-222ENST00000564228 FAM19A1Q7Z5A9 133 aa7.72□□□□□ -1.17
TCF4-222ENST00000564228 TRBV6-4A0A1B0GX49 114 aa7.72□□□□□ -1.17
TCF4-222ENST00000564228 TMEM256-PLSCR3K7ERE1 68 aa7.72□□□□□ -1.17
TCF4-222ENST00000564228 LINC00158P58513 81 aa7.72□□□□□ -1.17
TCF4-222ENST00000564228 STHQ8IWL8 128 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms