RNA–Protein interactions for RNA: ENST00000564177.1

SCAPER-211, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-211ENST00000564177 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
SCAPER-211ENST00000564177 HSBP1O75506 76 aa11.53□□□□□ -0.56
SCAPER-211ENST00000564177 INAFM2P0DMQ5 153 aa11.53□□□□□ -0.56
SCAPER-211ENST00000564177 RPL18AQ02543 176 aaKnown RBP11.53□□□□□ -0.56
SCAPER-211ENST00000564177 GAGE2BQ13066 116 aa11.53□□□□□ -0.56
SCAPER-211ENST00000564177 TOMM7Q9P0U1 55 aa11.53□□□□□ -0.56
SCAPER-211ENST00000564177 TLX1NBP0CAT3 122 aa11.52□□□□□ -0.57
SCAPER-211ENST00000564177 LINC00310P59036 64 aa11.52□□□□□ -0.57
SCAPER-211ENST00000564177 C6orf226Q5I0X4 101 aa11.52□□□□□ -0.57
SCAPER-211ENST00000564177 SERF1AO75920 110 aa11.51□□□□□ -0.57
SCAPER-211ENST00000564177 CKS1BP61024 79 aa11.51□□□□□ -0.57
SCAPER-211ENST00000564177 FAM19A2Q8N3H0 131 aa11.51□□□□□ -0.57
SCAPER-211ENST00000564177 MYCBP2O75592 4640 aa11.5□□□□□ -0.57
SCAPER-211ENST00000564177 H3BRM9 83 aa11.5□□□□□ -0.57
SCAPER-211ENST00000564177 RPL37AP61513 92 aaKnown RBP11.5□□□□□ -0.57
SCAPER-211ENST00000564177 Q6ZRP5 223 aa11.5□□□□□ -0.57
SCAPER-211ENST00000564177 IFI27L1Q96BM0 104 aa11.5□□□□□ -0.57
SCAPER-211ENST00000564177 SPINK8P0C7L1 97 aa11.49□□□□□ -0.57
SCAPER-211ENST00000564177 ZNF22P17026 224 aaPredicted RBP11.48□□□□□ -0.57
SCAPER-211ENST00000564177 CXCL5P42830 114 aa11.48□□□□□ -0.57
SCAPER-211ENST00000564177 COX7B2Q8TF08 81 aa11.48□□□□□ -0.57
SCAPER-211ENST00000564177 TRAV12-1A0A0B4J245 112 aa11.47□□□□□ -0.57
SCAPER-211ENST00000564177 F8VRH5 84 aa11.47□□□□□ -0.57
SCAPER-211ENST00000564177 C11orf86A6NJI1 115 aa11.46□□□□□ -0.57
SCAPER-211ENST00000564177 NDUFC2-KCTD14E9PQ53 114 aa11.46□□□□□ -0.57
SCAPER-211ENST00000564177 NUPR1O60356 82 aa11.46□□□□□ -0.57
SCAPER-211ENST00000564177 C9orf116Q5BN46 136 aaPredicted RBP11.46□□□□□ -0.57
SCAPER-211ENST00000564177 C7orf33Q8WU49 177 aa11.46□□□□□ -0.57
SCAPER-211ENST00000564177 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
SCAPER-211ENST00000564177 IGLV5-39A0A0G2JS06 123 aa11.45□□□□□ -0.58
SCAPER-211ENST00000564177 A0A1W2PNN7 141 aa11.45□□□□□ -0.58
SCAPER-211ENST00000564177 PKHD1L1Q86WI1 4243 aa11.45□□□□□ -0.58
SCAPER-211ENST00000564177 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 LEPROTL1O95214 131 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 HIST1H2BMQ99879 126 aa11.44□□□□□ -0.58
SCAPER-211ENST00000564177 GAGE2EQ4V326 116 aa11.43□□□□□ -0.58
SCAPER-211ENST00000564177 KRTAP3-3Q9BYR6 98 aa11.43□□□□□ -0.58
SCAPER-211ENST00000564177 KRTAP3-2Q9BYR7 98 aa11.43□□□□□ -0.58
SCAPER-211ENST00000564177 GAGE2DQ9UEU5 116 aa11.43□□□□□ -0.58
SCAPER-211ENST00000564177 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
SCAPER-211ENST00000564177 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
SCAPER-211ENST00000564177 FAM168BA1KXE4 195 aa11.4□□□□□ -0.58
SCAPER-211ENST00000564177 S100A1P23297 94 aa11.39□□□□□ -0.59
SCAPER-211ENST00000564177 ODF1Q14990 250 aa11.39□□□□□ -0.59
SCAPER-211ENST00000564177 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
SCAPER-211ENST00000564177 H0Y8G0 127 aa11.38□□□□□ -0.59
SCAPER-211ENST00000564177 FABP4P15090 132 aa11.38□□□□□ -0.59
SCAPER-211ENST00000564177 HNRNPA3P51991 378 aaKnown RBP11.38□□□□□ -0.59
SCAPER-211ENST00000564177 TMEM223A0PJW6 202 aa11.37□□□□□ -0.59
SCAPER-211ENST00000564177 ATP6V1G1O75348 118 aa11.37□□□□□ -0.59
SCAPER-211ENST00000564177 PRR3P79522 188 aaKnown RBP11.37□□□□□ -0.59
SCAPER-211ENST00000564177 KRTAP7-1Q8IUC3 87 aa11.37□□□□□ -0.59
SCAPER-211ENST00000564177 FLG2Q5D862 2391 aaPredicted RBP11.36□□□□□ -0.59
SCAPER-211ENST00000564177 PHF5AQ7RTV0 110 aaKnown RBP11.36□□□□□ -0.59
SCAPER-211ENST00000564177 FAM19A5Q7Z5A7 132 aaPredicted RBP11.36□□□□□ -0.59
SCAPER-211ENST00000564177 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
SCAPER-211ENST00000564177 XAGE1AQ9HD64 81 aa11.34□□□□□ -0.59
SCAPER-211ENST00000564177 FAT3Q8TDW7 4589 aa11.34□□□□□ -0.59
SCAPER-211ENST00000564177 LRP1Q07954 4544 aaKnown RBP11.34□□□□□ -0.59
SCAPER-211ENST00000564177 PLNP26678 52 aa11.33□□□□□ -0.6
SCAPER-211ENST00000564177 M0QXV9 152 aa11.32□□□□□ -0.6
SCAPER-211ENST00000564177 COA6Q5JTJ3 125 aaKnown RBP11.32□□□□□ -0.6
SCAPER-211ENST00000564177 ZNF625Q96I27 306 aaPredicted RBP11.32□□□□□ -0.6
SCAPER-211ENST00000564177 MAP1LC3CQ9BXW4 147 aa11.32□□□□□ -0.6
SCAPER-211ENST00000564177 SERTAD4-AS1Q5TG53 156 aa11.3□□□□□ -0.6
SCAPER-211ENST00000564177 ERG28Q9UKR5 140 aa11.3□□□□□ -0.6
SCAPER-211ENST00000564177 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
SCAPER-211ENST00000564177 DPM2O94777 84 aa11.29□□□□□ -0.6
SCAPER-211ENST00000564177 PFN2P35080 140 aa11.29□□□□□ -0.6
SCAPER-211ENST00000564177 COX17Q14061 63 aa11.29□□□□□ -0.6
SCAPER-211ENST00000564177 PMCHL2Q9BQD1 86 aa11.29□□□□□ -0.6
SCAPER-211ENST00000564177 PSORS1C2Q9UIG4 136 aa11.29□□□□□ -0.6
SCAPER-211ENST00000564177 HERC1Q15751 4861 aa11.29□□□□□ -0.6
SCAPER-211ENST00000564177 KRTAP11-1Q8IUC1 163 aa11.28□□□□□ -0.6
SCAPER-211ENST00000564177 IGKCP01834 107 aa11.27□□□□□ -0.61
SCAPER-211ENST00000564177 SYS1-DBNDD2H3BUS1 97 aa11.26□□□□□ -0.61
SCAPER-211ENST00000564177 PLA2G2DQ9UNK4 145 aa11.26□□□□□ -0.61
SCAPER-211ENST00000564177 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
SCAPER-211ENST00000564177 OXTP01178 125 aa11.25□□□□□ -0.61
SCAPER-211ENST00000564177 TP73-AS1Q9UF72 201 aa11.25□□□□□ -0.61
SCAPER-211ENST00000564177 UBE2BP63146 152 aa11.24□□□□□ -0.61
SCAPER-211ENST00000564177 C1orf137Q5JT78 98 aa11.24□□□□□ -0.61
SCAPER-211ENST00000564177 DMBT1Q9UGM3 2413 aaPredicted RBP11.23□□□□□ -0.61
SCAPER-211ENST00000564177 LEPROTO15243 131 aa11.23□□□□□ -0.61
SCAPER-211ENST00000564177 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
SCAPER-211ENST00000564177 SRSF9Q13242 221 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCAPER-211ENST00000564177 LBHQ53QV2 105 aaPredicted RBP11.23□□□□□ -0.61
SCAPER-211ENST00000564177 SPINK6Q6UWN8 80 aa11.23□□□□□ -0.61
SCAPER-211ENST00000564177 SND1-IT1Q9HBX3 110 aa11.23□□□□□ -0.61
SCAPER-211ENST00000564177 IGLV5-37A0A075B6J1 123 aa11.22□□□□□ -0.61
SCAPER-211ENST00000564177 J3QL48 77 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms