RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 IGLV2-11P01706 119 aa4.14□□□□□ -1.75
TUBGCP4-207ENST00000563963 IGHV3-64A0A075B6Q5 118 aa4.14□□□□□ -1.75
TUBGCP4-207ENST00000563963 RNF223E7ERA6 249 aa4.14□□□□□ -1.75
TUBGCP4-207ENST00000563963 C20orf203Q8NBC4 194 aa4.14□□□□□ -1.75
TUBGCP4-207ENST00000563963 PRRC2AP48634 2157 aaKnown RBP4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 LHBP01229 141 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 C17orf58Q2M2W7 97 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 MIR7-3HGQ8N6C7 128 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 AMELXQ99217 191 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 UBR5O95071 2799 aaPredicted RBP4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 LYSTQ99698 3801 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 IGLV4-69A0A075B6H9 119 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 TRBV6-5A0A0K0K1A5 114 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 B4DSR2 109 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 REG3GQ6UW15 175 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 LINC00208Q96KT6 92 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 HIGD2AQ9BW72 106 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 CNFNQ9BYD5 112 aa4.13□□□□□ -1.75
TUBGCP4-207ENST00000563963 SVEP1Q4LDE5 3571 aa4.12□□□□□ -1.75
TUBGCP4-207ENST00000563963 C22orf34Q6ZV56 151 aa4.12□□□□□ -1.75
TUBGCP4-207ENST00000563963 IGHV3-21A0A0B4J1V1 117 aa4.12□□□□□ -1.75
TUBGCP4-207ENST00000563963 INAFM1C9JVW0 142 aa4.12□□□□□ -1.75
TUBGCP4-207ENST00000563963 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
TUBGCP4-207ENST00000563963 WDFY4Q6ZS81 3184 aa4.12□□□□□ -1.75
TUBGCP4-207ENST00000563963 WT1-ASQ06250 92 aa4.12□□□□□ -1.75
TUBGCP4-207ENST00000563963 IGKV3-15P01624 115 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 RPL36AP83881 106 aaKnown RBP4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 SPAG11BQ08648 103 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 C10orf55Q5SWW7 151 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 SPAG11AQ6PDA7 123 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 B9D2Q9BPU9 175 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 IGKV1D-37A0A075B6S9 117 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 S4R3C0 116 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 CADP27708 2225 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 LECT2O14960 151 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 IGLV1-51P01701 117 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 PLCE1Q9P212 2302 aa4.11□□□□□ -1.75
TUBGCP4-207ENST00000563963 H3BRN7 92 aa4.1□□□□□ -1.75
TUBGCP4-207ENST00000563963 C9orf106Q8NAJ2 232 aa4.1□□□□□ -1.75
TUBGCP4-207ENST00000563963 CHTF8P0CG12 524 aa4.1□□□□□ -1.75
TUBGCP4-207ENST00000563963 CGB3P0DN86 165 aa4.1□□□□□ -1.75
TUBGCP4-207ENST00000563963 CGB7P0DN87 165 aa4.1□□□□□ -1.75
TUBGCP4-207ENST00000563963 DCHS1Q96JQ0 3298 aa4.1□□□□□ -1.75
TUBGCP4-207ENST00000563963 GAFA1Q96PS6 74 aa4.1□□□□□ -1.75
TUBGCP4-207ENST00000563963 DSCAMO60469 2012 aa4.1□□□□□ -1.75
TUBGCP4-207ENST00000563963 CSMD3Q7Z407 3707 aa4.1□□□□□ -1.75
TUBGCP4-207ENST00000563963 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
TUBGCP4-207ENST00000563963 MSRB1Q9NZV6 116 aa4.09□□□□□ -1.75
TUBGCP4-207ENST00000563963 IGHV1-3A0A0C4DH29 117 aa4.09□□□□□ -1.75
TUBGCP4-207ENST00000563963 IGHV1-18A0A0C4DH31 117 aa4.09□□□□□ -1.75
TUBGCP4-207ENST00000563963 C9orf66Q5T8R8 295 aa4.09□□□□□ -1.75
TUBGCP4-207ENST00000563963 LINC00308Q8TCZ7 52 aa4.09□□□□□ -1.75
TUBGCP4-207ENST00000563963 APELAP0DMC3 54 aa4.09□□□□□ -1.75
TUBGCP4-207ENST00000563963 HIGD2BQ4VC39 106 aa4.09□□□□□ -1.75
TUBGCP4-207ENST00000563963 WFDC10AQ9H1F0 79 aa4.09□□□□□ -1.75
TUBGCP4-207ENST00000563963 H3BQ85 93 aa4.09□□□□□ -1.76
TUBGCP4-207ENST00000563963 PRB2P02812 416 aaPredicted RBP4.09□□□□□ -1.76
TUBGCP4-207ENST00000563963 ZNF580Q9UK33 172 aa4.09□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGHV3-35A0A0C4DH35 117 aa4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 LY6G6EA0A0G2JKS1 128 aa4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 MSMBP08118 114 aa4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 RNF5Q99942 180 aa4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 U3KQA8 63 aa4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGLV1-44P01699 117 aa4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 CMC4P56277 68 aaPredicted RBP4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 ROMO1P60602 79 aa4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGLV5-45A0A087WSX0 123 aa4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGKV2-40A0A087WW87 121 aaPredicted RBP4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGHV7-81A0A0B4J1V7 117 aa4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGKV2D-40P01614 121 aaPredicted RBP4.08□□□□□ -1.76
TUBGCP4-207ENST00000563963 RNASE1P07998 156 aaKnown RBP4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 CCL3L1P16619 93 aa4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 CRIP1P50238 77 aa4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 C1orf229Q6ZS94 237 aaPredicted RBP4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 LITAFQ99732 161 aa4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 C22orf24Q9Y442 160 aa4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 GAS8-AS1O95177 125 aa4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 PRR4Q16378 134 aa4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 Q9BRP9 147 aa4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 MGAM2Q2M2H8 2515 aa4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
TUBGCP4-207ENST00000563963 DNAH7Q8WXX0 4024 aa4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGHV1-46P01743 117 aa4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 CTSGP08311 255 aa4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGHV3-74A0A0B4J1X5 117 aa4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 C11orf21Q9P2W6 132 aa4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGHV3-73A0A0B4J1V6 119 aa4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGLV2-23P01705 113 aa4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 USP9YO00507 2555 aaPredicted RBP4.06□□□□□ -1.76
TUBGCP4-207ENST00000563963 Q8TAT8 98 aa4.05□□□□□ -1.76
TUBGCP4-207ENST00000563963 CAMK2N2Q96S95 79 aa4.05□□□□□ -1.76
TUBGCP4-207ENST00000563963 ZNRD1Q9P1U0 126 aa4.05□□□□□ -1.76
TUBGCP4-207ENST00000563963 DNAH6Q9C0G6 4158 aa4.05□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGHV4-61A0A0C4DH41 118 aa4.05□□□□□ -1.76
TUBGCP4-207ENST00000563963 NDUFA4O00483 81 aa4.05□□□□□ -1.76
TUBGCP4-207ENST00000563963 IGHV4-59P01825 116 aa4.05□□□□□ -1.76
TUBGCP4-207ENST00000563963 PRB3Q04118 309 aaPredicted RBP4.05□□□□□ -1.76
TUBGCP4-207ENST00000563963 ZNF575Q86XF7 245 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms