RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 SPINK9Q5DT21 86 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 FAM74A4Q5TZK3 123 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 NPBQ8NG41 125 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 Q8TAT8 98 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 TTTY12Q9BZ98 90 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 ORMDL1Q9P0S3 153 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 COL4A2P08572 1712 aa2.27□□□□□ -2.05
GDE1-202ENST00000563645 IGKV1OR2-108A0A075B7D4 117 aa2.26□□□□□ -2.05
GDE1-202ENST00000563645 LOC110117498A0A087WWA1 95 aa2.26□□□□□ -2.05
GDE1-202ENST00000563645 PDE6GP18545 87 aa2.26□□□□□ -2.05
GDE1-202ENST00000563645 KPRPQ5T749 579 aaPredicted RBP2.26□□□□□ -2.05
GDE1-202ENST00000563645 FAM27BQ5VT28 67 aa2.26□□□□□ -2.05
GDE1-202ENST00000563645 C10orf113Q5VZT2 155 aa2.26□□□□□ -2.05
GDE1-202ENST00000563645 SPANXA2-OT1Q8N9U9 137 aa2.26□□□□□ -2.05
GDE1-202ENST00000563645 LINC00208Q96KT6 92 aa2.26□□□□□ -2.05
GDE1-202ENST00000563645 LENEPQ9Y5L5 61 aa2.26□□□□□ -2.05
GDE1-202ENST00000563645 PRR14LQ5THK1 2151 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 IGHV3-15A0A0B4J1V0 119 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 IGHV7-4-1A0A0J9YVY3 117 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 IGKV2-29A2NJV5 120 aaPredicted RBP2.25□□□□□ -2.05
GDE1-202ENST00000563645 NDUFB1O75438 58 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 HAMPP81172 84 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 SPAG11BQ08648 103 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 LINC00483Q53H64 154 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 SPAG11AQ6PDA7 123 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.25□□□□□ -2.05
GDE1-202ENST00000563645 LINC00308Q8TCZ7 52 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 C7orf33Q8WU49 177 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 C20orf166-AS1Q96NR2 134 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 CAMK2N2Q96S95 79 aa2.25□□□□□ -2.05
GDE1-202ENST00000563645 DIDO1Q9BTC0 2240 aaKnown RBP2.25□□□□□ -2.05
GDE1-202ENST00000563645 K7ERS5 55 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 IGHV3-53P01767 116 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 IGKV4-1P06312 121 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 PDE6HQ13956 83 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 DEFB113Q30KQ7 82 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 Q6ZTI0 123 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 COX7B2Q8TF08 81 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 DEC1Q9P2X7 70 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 KLK9Q9UKQ9 250 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 FAM215AQ9Y5M1 114 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 SDK2Q58EX2 2172 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 CR1P17927 2039 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 ZFHX3Q15911 3703 aa2.24□□□□□ -2.05
GDE1-202ENST00000563645 CACNA1DQ01668 2161 aa2.23□□□□□ -2.05
GDE1-202ENST00000563645 IGKV3D-11A0A0A0MRZ8 115 aa2.23□□□□□ -2.05
GDE1-202ENST00000563645 IGHV3-49A0A0A0MS15 119 aa2.23□□□□□ -2.05
GDE1-202ENST00000563645 IGKV1-17P01599 117 aa2.23□□□□□ -2.05
GDE1-202ENST00000563645 IGHV1-46P01743 117 aa2.23□□□□□ -2.05
GDE1-202ENST00000563645 IGHV1-8P0DP01 117 aa2.23□□□□□ -2.05
GDE1-202ENST00000563645 DEFB114Q30KQ6 69 aa2.23□□□□□ -2.05
GDE1-202ENST00000563645 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
GDE1-202ENST00000563645 SVILO95425 2214 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 CACNA1CQ13936 2221 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 IGLV4-60A0A075B6I1 120 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.22□□□□□ -2.05
GDE1-202ENST00000563645 IGKV1D-37A0A075B6S9 117 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 NDUFA4O00483 81 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 NDUFA1O15239 70 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 NTM-AS1Q6ZSK4 140 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 CIRBP-AS1Q8TBR5 109 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 WFDC10AQ9H1F0 79 aa2.22□□□□□ -2.05
GDE1-202ENST00000563645 IGHV1-18A0A0C4DH31 117 aa2.21□□□□□ -2.06
GDE1-202ENST00000563645 LINC00959A0A1B0GUT2 108 aa2.21□□□□□ -2.06
GDE1-202ENST00000563645 A0A1B0GVX0 72 aa2.21□□□□□ -2.06
GDE1-202ENST00000563645 A6NDX4 124 aa2.21□□□□□ -2.06
GDE1-202ENST00000563645 LINC00315P59091 139 aa2.21□□□□□ -2.06
GDE1-202ENST00000563645 KRTAP26-1Q6PEX3 210 aa2.21□□□□□ -2.06
GDE1-202ENST00000563645 SPATA8Q6RVD6 105 aa2.21□□□□□ -2.06
GDE1-202ENST00000563645 Q8N9W7 124 aa2.21□□□□□ -2.06
GDE1-202ENST00000563645 CHCHD7Q9BUK0 85 aa2.21□□□□□ -2.06
GDE1-202ENST00000563645 KIAA0100Q14667 2235 aaKnown RBP2.21□□□□□ -2.06
GDE1-202ENST00000563645 MALRD1Q5VYJ5 2156 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 KNTC1P50748 2209 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 IGLV1-50A0A075B6I6 118 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 IGHV3-64A0A075B6Q5 118 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.2□□□□□ -2.06
GDE1-202ENST00000563645 IGHV3-66A0A0C4DH42 116 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 ETDCA0A1B0GVM5 59 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 H0Y9P7 68 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 M0R2N4 97 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 TLX1NBP0CAT3 122 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 POLR2KP53803 58 aaKnown RBP2.2□□□□□ -2.06
GDE1-202ENST00000563645 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 C1orf137Q5JT78 98 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 COA5Q86WW8 74 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 SMIM11BQ8TCY0 68 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 SPRR4Q96PI1 79 aa2.2□□□□□ -2.06
GDE1-202ENST00000563645 IGLV10-54A0A075B6I4 117 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 A8MUU9 505 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 ODF3BA8MYP8 253 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 PRCDQ00LT1 54 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 TMEM105Q8N8V8 129 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 C15orf56Q8N910 161 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 C9orf163Q8N9P6 203 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 GAFA1Q96PS6 74 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 KCNQ1DNQ9H478 68 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 TNCP24821 2201 aa2.19□□□□□ -2.06
GDE1-202ENST00000563645 BPTFQ12830 3046 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms