RNA–Protein interactions for RNA: ENST00000562772.1

AP003071.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003071.2, Length 990 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.2-201ENST00000562772 GNB1LQ9BYB4 327 aa4.9□□□□□ -1.63
AP003071.2-201ENST00000562772 V9GYV3 84 aa4.9□□□□□ -1.63
AP003071.2-201ENST00000562772 TRBV27A0A0K0K1C4 114 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 PPP1R17O96001 155 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 APCSP02743 223 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 POLR2KP53803 58 aaKnown RBP4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 PEA15Q15121 130 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 CLPSL2Q6UWE3 100 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 SDIM1Q6ZPB5 146 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 CIRBP-AS1Q8TBR5 109 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 VPS25Q9BRG1 176 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 ST20Q9HBF5 79 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 NAT8Q9UHE5 227 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 NAT8BQ9UHF3 227 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 HERC1Q15751 4861 aa4.89□□□□□ -1.63
AP003071.2-201ENST00000562772 IGLV10-54A0A075B6I4 117 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 FAM236DA0A1B0GTK5 79 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 SMIM27A0A1W2PRY6 76 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 FAM236CP0DP71 79 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 FGF6P10767 208 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 RPL23P62829 140 aaKnown RBP4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 CIRBPQ14011 172 aaKnown RBP4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 C6orf99Q4VX62 202 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 AMMECR1LQ6DCA0 310 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 LINC00173Q6ZV60 143 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 NUP35Q8NFH5 326 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 DEFB104AQ8WTQ1 72 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 MYCBP2O75592 4640 aa4.88□□□□□ -1.63
AP003071.2-201ENST00000562772 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
AP003071.2-201ENST00000562772 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.87□□□□□ -1.63
AP003071.2-201ENST00000562772 LINC00862A6NCI5 91 aa4.87□□□□□ -1.63
AP003071.2-201ENST00000562772 RPL37AP8A6NKH3 93 aa4.87□□□□□ -1.63
AP003071.2-201ENST00000562772 KRTAP10-4P60372 401 aaPredicted RBP4.87□□□□□ -1.63
AP003071.2-201ENST00000562772 FA2HQ7L5A8 372 aa4.87□□□□□ -1.63
AP003071.2-201ENST00000562772 AMN1Q8IY45 258 aa4.87□□□□□ -1.63
AP003071.2-201ENST00000562772 OR5A1Q8NGJ0 315 aa4.87□□□□□ -1.63
AP003071.2-201ENST00000562772 TMEM126AQ9H061 195 aa4.87□□□□□ -1.63
AP003071.2-201ENST00000562772 TRBV24-1A0A075B6N3 115 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 LOC389332A0A1B0GUA5 103 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 IGKV2-29A2NJV5 120 aaPredicted RBP4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 C9JQL5 133 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 CCL25O15444 150 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 GAS8-AS1O95177 125 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 SMIM6P0DI80 62 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 RPS10P46783 165 aaKnown RBP4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 HERVK_113P61574 105 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 ADIRFQ15847 76 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 FAM104BQ5XKR9 115 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 TMEM101Q96IK0 257 aa4.86□□□□□ -1.63
AP003071.2-201ENST00000562772 IGHV3-64A0A075B6Q5 118 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 GVQW2A0A096LPI5 108 aaPredicted RBP4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 IGHV6-1A0A0B4J1U7 121 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 A0A1B0GX51 115 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 C7orf77A4D0Y5 90 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 KRTAP29-1A8MX34 341 aaPredicted RBP4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 NDUFC2O95298 119 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 S100A8P05109 93 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 Q6ZRU5 148 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 LINC00337Q8N6G1 96 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 C15orf56Q8N910 161 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 NRACQ8N912 160 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 C20orf78Q9BR46 151 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 TMEM242Q9NWH2 141 aa4.85□□□□□ -1.63
AP003071.2-201ENST00000562772 LINC00959A0A1B0GUT2 108 aa4.84□□□□□ -1.63
AP003071.2-201ENST00000562772 JOSD1Q15040 202 aaPredicted RBP4.84□□□□□ -1.63
AP003071.2-201ENST00000562772 REG3GQ6UW15 175 aa4.84□□□□□ -1.63
AP003071.2-201ENST00000562772 ZNF664Q8N3J9 261 aa4.84□□□□□ -1.63
AP003071.2-201ENST00000562772 TIMM21Q9BVV7 248 aa4.84□□□□□ -1.63
AP003071.2-201ENST00000562772 PHOX2AO14813 284 aa4.83□□□□□ -1.64
AP003071.2-201ENST00000562772 FCER1GP30273 86 aa4.83□□□□□ -1.64
AP003071.2-201ENST00000562772 SS18Q15532 418 aa4.83□□□□□ -1.64
AP003071.2-201ENST00000562772 MRPL51Q4U2R6 128 aaKnown RBP4.83□□□□□ -1.64
AP003071.2-201ENST00000562772 C2orf66Q6UXQ4 117 aa4.83□□□□□ -1.64
AP003071.2-201ENST00000562772 ATP5L2Q7Z4Y8 100 aa4.83□□□□□ -1.64
AP003071.2-201ENST00000562772 PLEKHB2Q96CS7 222 aa4.83□□□□□ -1.64
AP003071.2-201ENST00000562772 RBM12B-AS1Q9P1G2 102 aa4.83□□□□□ -1.64
AP003071.2-201ENST00000562772 IGHV1-58A0A0C4DH39 117 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 IGKV3OR2-268A0A0C4DH90 116 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 C1orf196B1AJZ1 125 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 PANO1I0J062 215 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 J3KT08 172 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 CHTF8P0CG12 524 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 CKS2P33552 79 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 HBBP68871 147 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 SPACA4Q8TDM5 124 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 PLAC8Q9NZF1 115 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 UBE2D4Q9Y2X8 147 aa4.82□□□□□ -1.64
AP003071.2-201ENST00000562772 XCL1P47992 114 aa4.81□□□□□ -1.64
AP003071.2-201ENST00000562772 MP68P56378 58 aa4.81□□□□□ -1.64
AP003071.2-201ENST00000562772 RPL37AP61513 92 aaKnown RBP4.81□□□□□ -1.64
AP003071.2-201ENST00000562772 ADAMTSL4-AS1Q5T5F5 129 aa4.81□□□□□ -1.64
AP003071.2-201ENST00000562772 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
AP003071.2-201ENST00000562772 HSPB8Q9UJY1 196 aa4.81□□□□□ -1.64
AP003071.2-201ENST00000562772 A0A087WYN8 130 aa4.8□□□□□ -1.64
AP003071.2-201ENST00000562772 D6R8Y8 96 aa4.8□□□□□ -1.64
AP003071.2-201ENST00000562772 COX6A2Q02221 97 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms