RNA–Protein interactions for RNA: ENST00000562248.1

LINC00304-202, long intergenic non-protein coding RNA 304, humanhuman

TSL 1 (best) BASIC

Gene LINC00304, Length 1,095 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304-202ENST00000562248 TOMM7Q9P0U1 55 aa12.64□□□□□ -0.39
LINC00304-202ENST00000562248 SMIM1B2RUZ4 78 aa12.63□□□□□ -0.39
LINC00304-202ENST00000562248 ATP5LO75964 103 aa12.63□□□□□ -0.39
LINC00304-202ENST00000562248 C6orf226Q5I0X4 101 aa12.63□□□□□ -0.39
LINC00304-202ENST00000562248 Q6ZRP5 223 aa12.63□□□□□ -0.39
LINC00304-202ENST00000562248 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
LINC00304-202ENST00000562248 C7orf33Q8WU49 177 aa12.62□□□□□ -0.39
LINC00304-202ENST00000562248 HNRNPA3P51991 378 aaKnown RBP12.61□□□□□ -0.39
LINC00304-202ENST00000562248 NDUFA6P56556 154 aa12.61□□□□□ -0.39
LINC00304-202ENST00000562248 CKS1BP61024 79 aa12.6□□□□□ -0.39
LINC00304-202ENST00000562248 C9orf116Q5BN46 136 aaPredicted RBP12.6□□□□□ -0.39
LINC00304-202ENST00000562248 BAGE3Q86Y29 109 aa12.58□□□□□ -0.4
LINC00304-202ENST00000562248 NDUFC2-KCTD14E9PQ53 114 aa12.57□□□□□ -0.4
LINC00304-202ENST00000562248 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
LINC00304-202ENST00000562248 COX7B2Q8TF08 81 aa12.57□□□□□ -0.4
LINC00304-202ENST00000562248 GAGE2EQ4V326 116 aa12.56□□□□□ -0.4
LINC00304-202ENST00000562248 GAGE2DQ9UEU5 116 aa12.56□□□□□ -0.4
LINC00304-202ENST00000562248 MYCBP2O75592 4640 aa12.56□□□□□ -0.4
LINC00304-202ENST00000562248 F8VRH5 84 aa12.55□□□□□ -0.4
LINC00304-202ENST00000562248 H3BRM9 83 aa12.55□□□□□ -0.4
LINC00304-202ENST00000562248 HSBP1O75506 76 aa12.55□□□□□ -0.4
LINC00304-202ENST00000562248 SCO1O75880 301 aa12.55□□□□□ -0.4
LINC00304-202ENST00000562248 ZNF22P17026 224 aaPredicted RBP12.55□□□□□ -0.4
LINC00304-202ENST00000562248 CXCL5P42830 114 aa12.55□□□□□ -0.4
LINC00304-202ENST00000562248 LINC00310P59036 64 aa12.55□□□□□ -0.4
LINC00304-202ENST00000562248 FAM19A2Q8N3H0 131 aa12.55□□□□□ -0.4
LINC00304-202ENST00000562248 IFI27L1Q96BM0 104 aa12.55□□□□□ -0.4
LINC00304-202ENST00000562248 KRTAP29-1A8MX34 341 aaPredicted RBP12.54□□□□□ -0.4
LINC00304-202ENST00000562248 PKHD1L1Q86WI1 4243 aa12.54□□□□□ -0.4
LINC00304-202ENST00000562248 IGLV5-39A0A0G2JS06 123 aa12.53□□□□□ -0.4
LINC00304-202ENST00000562248 FAM168BA1KXE4 195 aa12.53□□□□□ -0.4
LINC00304-202ENST00000562248 C11orf86A6NJI1 115 aa12.53□□□□□ -0.4
LINC00304-202ENST00000562248 SERF1AO75920 110 aa12.53□□□□□ -0.4
LINC00304-202ENST00000562248 PRR3P79522 188 aaKnown RBP12.53□□□□□ -0.4
LINC00304-202ENST00000562248 KRTAP7-1Q8IUC3 87 aa12.53□□□□□ -0.4
LINC00304-202ENST00000562248 TRAV12-1A0A0B4J245 112 aa12.52□□□□□ -0.41
LINC00304-202ENST00000562248 C9orf129Q5T035 196 aaKnown RBP12.52□□□□□ -0.41
LINC00304-202ENST00000562248 CHTOPQ9Y3Y2 248 aaKnown RBP12.52□□□□□ -0.41
LINC00304-202ENST00000562248 NUPR1O60356 82 aa12.51□□□□□ -0.41
LINC00304-202ENST00000562248 PHF5AQ7RTV0 110 aaKnown RBP12.51□□□□□ -0.41
LINC00304-202ENST00000562248 OXTP01178 125 aa12.48□□□□□ -0.41
LINC00304-202ENST00000562248 TMEM170BQ5T4T1 132 aa12.47□□□□□ -0.41
LINC00304-202ENST00000562248 FAM19A5Q7Z5A7 132 aaPredicted RBP12.47□□□□□ -0.41
LINC00304-202ENST00000562248 DMBT1Q9UGM3 2413 aaPredicted RBP12.46□□□□□ -0.41
LINC00304-202ENST00000562248 J3QL48 77 aa12.45□□□□□ -0.42
LINC00304-202ENST00000562248 LEPROTL1O95214 131 aa12.45□□□□□ -0.42
LINC00304-202ENST00000562248 XAGE1AQ9HD64 81 aa12.45□□□□□ -0.42
LINC00304-202ENST00000562248 PSORS1C2Q9UIG4 136 aa12.45□□□□□ -0.42
LINC00304-202ENST00000562248 SRSF9Q13242 221 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00304-202ENST00000562248 KRTAP11-1Q8IUC1 163 aa12.44□□□□□ -0.42
LINC00304-202ENST00000562248 LRP1Q07954 4544 aaKnown RBP12.43□□□□□ -0.42
LINC00304-202ENST00000562248 TMEM223A0PJW6 202 aa12.43□□□□□ -0.42
LINC00304-202ENST00000562248 HIST1H2BKO60814 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST1H2BJP06899 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST1H2BOP23527 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST1H2BBP33778 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST1H2BDP58876 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST1H2BCP62807 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 ODF1Q14990 250 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST2H2BEQ16778 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.42□□□□□ -0.42
LINC00304-202ENST00000562248 SERTAD4-AS1Q5TG53 156 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST1H2BHQ93079 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST1H2BNQ99877 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 HIST1H2BMQ99879 126 aa12.42□□□□□ -0.42
LINC00304-202ENST00000562248 M0QXV9 152 aa12.41□□□□□ -0.42
LINC00304-202ENST00000562248 HSPB8Q9UJY1 196 aa12.41□□□□□ -0.42
LINC00304-202ENST00000562248 FAT3Q8TDW7 4589 aa12.4□□□□□ -0.42
LINC00304-202ENST00000562248 FABP4P15090 132 aa12.4□□□□□ -0.42
LINC00304-202ENST00000562248 SPINK6Q6UWN8 80 aa12.4□□□□□ -0.42
LINC00304-202ENST00000562248 ZNF625Q96I27 306 aaPredicted RBP12.39□□□□□ -0.43
LINC00304-202ENST00000562248 C22orf24Q9Y442 160 aa12.39□□□□□ -0.43
LINC00304-202ENST00000562248 H0Y8G0 127 aa12.38□□□□□ -0.43
LINC00304-202ENST00000562248 C1orf137Q5JT78 98 aa12.37□□□□□ -0.43
LINC00304-202ENST00000562248 PLA2G2DQ9UNK4 145 aa12.37□□□□□ -0.43
LINC00304-202ENST00000562248 PFN2P35080 140 aa12.36□□□□□ -0.43
LINC00304-202ENST00000562248 SFTA2Q6UW10 78 aa12.36□□□□□ -0.43
LINC00304-202ENST00000562248 ERG28Q9UKR5 140 aa12.36□□□□□ -0.43
LINC00304-202ENST00000562248 HERC1Q15751 4861 aa12.36□□□□□ -0.43
LINC00304-202ENST00000562248 COX17Q14061 63 aa12.35□□□□□ -0.43
LINC00304-202ENST00000562248 TP73-AS1Q9UF72 201 aa12.35□□□□□ -0.43
LINC00304-202ENST00000562248 MT1HL1P0DM35 61 aa12.34□□□□□ -0.43
LINC00304-202ENST00000562248 UBE2BP63146 152 aa12.34□□□□□ -0.43
LINC00304-202ENST00000562248 IGLV7-43P04211 117 aa12.33□□□□□ -0.44
LINC00304-202ENST00000562248 LBHQ53QV2 105 aaPredicted RBP12.33□□□□□ -0.44
LINC00304-202ENST00000562248 IGLV5-37A0A075B6J1 123 aa12.32□□□□□ -0.44
LINC00304-202ENST00000562248 PLNP26678 52 aa12.32□□□□□ -0.44
LINC00304-202ENST00000562248 MAP1LC3CQ9BXW4 147 aa12.32□□□□□ -0.44
LINC00304-202ENST00000562248 SND1-IT1Q9HBX3 110 aa12.32□□□□□ -0.44
LINC00304-202ENST00000562248 DPM2O94777 84 aa12.31□□□□□ -0.44
LINC00304-202ENST00000562248 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
LINC00304-202ENST00000562248 PMCHL2Q9BQD1 86 aa12.31□□□□□ -0.44
LINC00304-202ENST00000562248 COA6Q5JTJ3 125 aaKnown RBP12.3□□□□□ -0.44
LINC00304-202ENST00000562248 LINC01600Q96MT4 127 aa12.3□□□□□ -0.44
LINC00304-202ENST00000562248 S100A1P23297 94 aa12.29□□□□□ -0.44
LINC00304-202ENST00000562248 LINC00167Q96N53 147 aa12.29□□□□□ -0.44
LINC00304-202ENST00000562248 IGKCP01834 107 aa12.28□□□□□ -0.44
LINC00304-202ENST00000562248 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
LINC00304-202ENST00000562248 LEPROTO15243 131 aa12.27□□□□□ -0.45
LINC00304-202ENST00000562248 SYS1-DBNDD2H3BUS1 97 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms