RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TRBV30A0A0K0K1B3 111 aa8.53□□□□□ -1.04
CDH1-204ENST00000562118 F8VRH5 84 aa8.53□□□□□ -1.04
CDH1-204ENST00000562118 ODF1Q14990 250 aa8.53□□□□□ -1.04
CDH1-204ENST00000562118 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
CDH1-204ENST00000562118 A0A096LNI7 61 aa8.52□□□□□ -1.05
CDH1-204ENST00000562118 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.05
CDH1-204ENST00000562118 PLAC8Q9NZF1 115 aa8.52□□□□□ -1.05
CDH1-204ENST00000562118 HSPB8Q9UJY1 196 aa8.52□□□□□ -1.05
CDH1-204ENST00000562118 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
CDH1-204ENST00000562118 PCLOQ9Y6V0 5065 aa8.52□□□□□ -1.05
CDH1-204ENST00000562118 SRRM2Q9UQ35 2752 aaKnown RBP8.52□□□□□ -1.05
CDH1-204ENST00000562118 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
CDH1-204ENST00000562118 H3BRM9 83 aa8.51□□□□□ -1.05
CDH1-204ENST00000562118 CHTF8P0CG12 524 aa8.51□□□□□ -1.05
CDH1-204ENST00000562118 CXCL5P42830 114 aa8.51□□□□□ -1.05
CDH1-204ENST00000562118 PTTG1IPP53801 180 aa8.51□□□□□ -1.05
CDH1-204ENST00000562118 HAMPP81172 84 aa8.51□□□□□ -1.05
CDH1-204ENST00000562118 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
CDH1-204ENST00000562118 NDUFA6P56556 154 aa8.5□□□□□ -1.05
CDH1-204ENST00000562118 C2orf82Q6UX34 121 aa8.5□□□□□ -1.05
CDH1-204ENST00000562118 PKHD1L1Q86WI1 4243 aa8.5□□□□□ -1.05
CDH1-204ENST00000562118 SPINK8P0C7L1 97 aa8.49□□□□□ -1.05
CDH1-204ENST00000562118 KRTAP10-4P60372 401 aaPredicted RBP8.49□□□□□ -1.05
CDH1-204ENST00000562118 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
CDH1-204ENST00000562118 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
CDH1-204ENST00000562118 A0A087WYN8 130 aa8.48□□□□□ -1.05
CDH1-204ENST00000562118 TMEM223A0PJW6 202 aa8.48□□□□□ -1.05
CDH1-204ENST00000562118 PRSS2P07478 247 aa8.48□□□□□ -1.05
CDH1-204ENST00000562118 C6orf226Q5I0X4 101 aa8.48□□□□□ -1.05
CDH1-204ENST00000562118 Q6ZRP5 223 aa8.47□□□□□ -1.05
CDH1-204ENST00000562118 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.06
CDH1-204ENST00000562118 FABP4P15090 132 aa8.46□□□□□ -1.06
CDH1-204ENST00000562118 PLNP26678 52 aa8.46□□□□□ -1.06
CDH1-204ENST00000562118 CKS1BP61024 79 aa8.46□□□□□ -1.06
CDH1-204ENST00000562118 TOMM7Q9P0U1 55 aa8.46□□□□□ -1.06
CDH1-204ENST00000562118 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
CDH1-204ENST00000562118 SYS1-DBNDD2H3BUS1 97 aa8.45□□□□□ -1.06
CDH1-204ENST00000562118 TMEM170BQ5T4T1 132 aa8.45□□□□□ -1.06
CDH1-204ENST00000562118 Q5VSD8 79 aa8.45□□□□□ -1.06
CDH1-204ENST00000562118 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
CDH1-204ENST00000562118 MAP1LC3CQ9BXW4 147 aa8.45□□□□□ -1.06
CDH1-204ENST00000562118 SMR3BP02814 79 aaPredicted RBP8.44□□□□□ -1.06
CDH1-204ENST00000562118 MAJINQ3KP22 176 aa8.44□□□□□ -1.06
CDH1-204ENST00000562118 C9orf116Q5BN46 136 aaPredicted RBP8.44□□□□□ -1.06
CDH1-204ENST00000562118 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
CDH1-204ENST00000562118 SFTA2Q6UW10 78 aa8.44□□□□□ -1.06
CDH1-204ENST00000562118 LINC00528Q8N1L1 170 aa8.44□□□□□ -1.06
CDH1-204ENST00000562118 DPM2O94777 84 aa8.43□□□□□ -1.06
CDH1-204ENST00000562118 STPG4Q8N801 248 aa8.43□□□□□ -1.06
CDH1-204ENST00000562118 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
CDH1-204ENST00000562118 IGKCP01834 107 aa8.42□□□□□ -1.06
CDH1-204ENST00000562118 RPL18AQ02543 176 aaKnown RBP8.42□□□□□ -1.06
CDH1-204ENST00000562118 GAGE2BQ13066 116 aa8.42□□□□□ -1.06
CDH1-204ENST00000562118 PET117Q6UWS5 81 aa8.42□□□□□ -1.06
CDH1-204ENST00000562118 KRTAP7-1Q8IUC3 87 aa8.42□□□□□ -1.06
CDH1-204ENST00000562118 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
CDH1-204ENST00000562118 C3orf79P0CE67 100 aa8.41□□□□□ -1.06
CDH1-204ENST00000562118 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
CDH1-204ENST00000562118 HIST3H2BBQ8N257 126 aa8.41□□□□□ -1.06
CDH1-204ENST00000562118 H0Y8G0 127 aa8.4□□□□□ -1.06
CDH1-204ENST00000562118 FAM229AH3BQW9 127 aa8.4□□□□□ -1.06
CDH1-204ENST00000562118 COX17Q14061 63 aa8.4□□□□□ -1.06
CDH1-204ENST00000562118 PMCHL2Q9BQD1 86 aa8.39□□□□□ -1.07
CDH1-204ENST00000562118 LEPROTO15243 131 aa8.38□□□□□ -1.07
CDH1-204ENST00000562118 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
CDH1-204ENST00000562118 TSPEAR-AS2P59090 65 aa8.38□□□□□ -1.07
CDH1-204ENST00000562118 HIST1H2BLQ99880 126 aa8.38□□□□□ -1.07
CDH1-204ENST00000562118 ERG28Q9UKR5 140 aa8.37□□□□□ -1.07
CDH1-204ENST00000562118 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
CDH1-204ENST00000562118 FAM168BA1KXE4 195 aa8.36□□□□□ -1.07
CDH1-204ENST00000562118 C5orf52A6NGY3 159 aa8.36□□□□□ -1.07
CDH1-204ENST00000562118 E9PLD3 99 aa8.36□□□□□ -1.07
CDH1-204ENST00000562118 GAGE2EQ4V326 116 aa8.36□□□□□ -1.07
CDH1-204ENST00000562118 PLEKHB2Q96CS7 222 aa8.36□□□□□ -1.07
CDH1-204ENST00000562118 GAGE2DQ9UEU5 116 aa8.36□□□□□ -1.07
CDH1-204ENST00000562118 FAT3Q8TDW7 4589 aa8.36□□□□□ -1.07
CDH1-204ENST00000562118 IGLV5-37A0A075B6J1 123 aa8.35□□□□□ -1.07
CDH1-204ENST00000562118 HERV-K104P63124 156 aa8.35□□□□□ -1.07
CDH1-204ENST00000562118 J3QQQ9 107 aa8.34□□□□□ -1.07
CDH1-204ENST00000562118 NMUP48645 174 aa8.34□□□□□ -1.07
CDH1-204ENST00000562118 RPL37AP61513 92 aaKnown RBP8.34□□□□□ -1.07
CDH1-204ENST00000562118 HERVK_113P61574 105 aa8.34□□□□□ -1.07
CDH1-204ENST00000562118 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
CDH1-204ENST00000562118 DPH3Q96FX2 82 aa8.34□□□□□ -1.07
CDH1-204ENST00000562118 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
CDH1-204ENST00000562118 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
CDH1-204ENST00000562118 TP73-AS1Q9UF72 201 aa8.34□□□□□ -1.07
CDH1-204ENST00000562118 KRTDAPP60985 99 aa8.33□□□□□ -1.08
CDH1-204ENST00000562118 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
CDH1-204ENST00000562118 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
CDH1-204ENST00000562118 XAGE1AQ9HD64 81 aa8.33□□□□□ -1.08
CDH1-204ENST00000562118 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
CDH1-204ENST00000562118 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
CDH1-204ENST00000562118 S100A6P06703 90 aa8.32□□□□□ -1.08
CDH1-204ENST00000562118 AKR1D1P51857 326 aa8.32□□□□□ -1.08
CDH1-204ENST00000562118 MYMXA0A1B0GTQ4 84 aa8.31□□□□□ -1.08
CDH1-204ENST00000562118 SNRPEP62304 92 aaKnown RBP8.31□□□□□ -1.08
CDH1-204ENST00000562118 PHF5AQ7RTV0 110 aaKnown RBP8.31□□□□□ -1.08
CDH1-204ENST00000562118 SND1-IT1Q9HBX3 110 aa8.31□□□□□ -1.08
CDH1-204ENST00000562118 LOC107984156A0A0G2JMH3 177 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms