RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 ZC2HC1BQ5TFG8 222 aa12.9□□□□□ -0.34
TPM1-232ENST00000561425 SCGB3A1Q96QR1 104 aa12.9□□□□□ -0.34
TPM1-232ENST00000561425 VCX2Q9H322 139 aa12.9□□□□□ -0.34
TPM1-232ENST00000561425 A0A096LNJ9 63 aa12.89□□□□□ -0.35
TPM1-232ENST00000561425 NUPR1O60356 82 aa12.89□□□□□ -0.35
TPM1-232ENST00000561425 GAGE2BQ13066 116 aa12.89□□□□□ -0.35
TPM1-232ENST00000561425 C10orf25Q5T742 122 aa12.89□□□□□ -0.35
TPM1-232ENST00000561425 Q6ZN92 141 aa12.89□□□□□ -0.35
TPM1-232ENST00000561425 FAM19A2Q8N3H0 131 aa12.89□□□□□ -0.35
TPM1-232ENST00000561425 TIMM17AQ99595 171 aa12.89□□□□□ -0.35
TPM1-232ENST00000561425 C2orf88Q9BSF0 95 aa12.89□□□□□ -0.35
TPM1-232ENST00000561425 A0A1W2PNN7 141 aa12.88□□□□□ -0.35
TPM1-232ENST00000561425 NDUFA1O15239 70 aa12.88□□□□□ -0.35
TPM1-232ENST00000561425 TLX1NBP0CAT3 122 aa12.88□□□□□ -0.35
TPM1-232ENST00000561425 A0A0J9YXV3 536 aa12.87□□□□□ -0.35
TPM1-232ENST00000561425 PRR3P79522 188 aaKnown RBP12.87□□□□□ -0.35
TPM1-232ENST00000561425 ERASQ7Z444 233 aa12.87□□□□□ -0.35
TPM1-232ENST00000561425 PDZD11Q5EBL8 140 aa12.86□□□□□ -0.35
TPM1-232ENST00000561425 PAPPA-AS1Q5QFB9 102 aa12.86□□□□□ -0.35
TPM1-232ENST00000561425 UNQ6190/PRO20217Q6UXQ8 127 aa12.86□□□□□ -0.35
TPM1-232ENST00000561425 C6orf48Q9UBA6 75 aa12.86□□□□□ -0.35
TPM1-232ENST00000561425 ATP5LO75964 103 aa12.85□□□□□ -0.35
TPM1-232ENST00000561425 LEPROTL1O95214 131 aa12.83□□□□□ -0.36
TPM1-232ENST00000561425 C9orf116Q5BN46 136 aaPredicted RBP12.83□□□□□ -0.36
TPM1-232ENST00000561425 MT1HL1P0DM35 61 aa12.82□□□□□ -0.36
TPM1-232ENST00000561425 RPL18AQ02543 176 aaKnown RBP12.82□□□□□ -0.36
TPM1-232ENST00000561425 Q6ZRP5 223 aa12.82□□□□□ -0.36
TPM1-232ENST00000561425 HSPB8Q9UJY1 196 aa12.82□□□□□ -0.36
TPM1-232ENST00000561425 TMA7Q9Y2S6 64 aaKnown RBP12.82□□□□□ -0.36
TPM1-232ENST00000561425 TRBV30A0A0K0K1B3 111 aa12.81□□□□□ -0.36
TPM1-232ENST00000561425 FABP4P15090 132 aa12.81□□□□□ -0.36
TPM1-232ENST00000561425 SEC11AP67812 179 aa12.81□□□□□ -0.36
TPM1-232ENST00000561425 SRSF9Q13242 221 aaKnown RBP eCLIP12.81□□□□□ -0.36
TPM1-232ENST00000561425 HERVK_113P63121 156 aa12.8□□□□□ -0.36
TPM1-232ENST00000561425 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
TPM1-232ENST00000561425 S100A2P29034 98 aa12.79□□□□□ -0.36
TPM1-232ENST00000561425 C2orf82Q6UX34 121 aa12.79□□□□□ -0.36
TPM1-232ENST00000561425 CDKN2A-AS1Q9UH64 79 aa12.79□□□□□ -0.36
TPM1-232ENST00000561425 Q8IZM0 81 aa12.78□□□□□ -0.36
TPM1-232ENST00000561425 PACRGQ96M98 296 aaPredicted RBP12.78□□□□□ -0.36
TPM1-232ENST00000561425 SNRPEP62304 92 aaKnown RBP12.77□□□□□ -0.37
TPM1-232ENST00000561425 PMVKQ15126 192 aa12.77□□□□□ -0.37
TPM1-232ENST00000561425 HIST3H2BBQ8N257 126 aa12.77□□□□□ -0.37
TPM1-232ENST00000561425 IGLV5-45A0A087WSX0 123 aa12.76□□□□□ -0.37
TPM1-232ENST00000561425 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
TPM1-232ENST00000561425 KRTAP7-1Q8IUC3 87 aa12.76□□□□□ -0.37
TPM1-232ENST00000561425 CST9LQ9H4G1 147 aa12.76□□□□□ -0.37
TPM1-232ENST00000561425 TINCRA0A1B0GVN0 87 aa12.75□□□□□ -0.37
TPM1-232ENST00000561425 NDUFC2-KCTD14E9PQ53 114 aa12.75□□□□□ -0.37
TPM1-232ENST00000561425 SERTAD4-AS1Q5TG53 156 aa12.75□□□□□ -0.37
TPM1-232ENST00000561425 GEMIN7Q9H840 131 aaKnown RBP12.75□□□□□ -0.37
TPM1-232ENST00000561425 C5orf52A6NGY3 159 aa12.74□□□□□ -0.37
TPM1-232ENST00000561425 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
TPM1-232ENST00000561425 FAM168BA1KXE4 195 aa12.73□□□□□ -0.37
TPM1-232ENST00000561425 H0Y8G0 127 aa12.73□□□□□ -0.37
TPM1-232ENST00000561425 C6orf226Q5I0X4 101 aa12.73□□□□□ -0.37
TPM1-232ENST00000561425 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
TPM1-232ENST00000561425 LINC01600Q96MT4 127 aa12.73□□□□□ -0.37
TPM1-232ENST00000561425 PRSS2P07478 247 aa12.72□□□□□ -0.37
TPM1-232ENST00000561425 GAGE2EQ4V326 116 aa12.72□□□□□ -0.37
TPM1-232ENST00000561425 GAGE2DQ9UEU5 116 aa12.72□□□□□ -0.37
TPM1-232ENST00000561425 PSORS1C2Q9UIG4 136 aa12.72□□□□□ -0.37
TPM1-232ENST00000561425 TRAV12-1A0A0B4J245 112 aa12.71□□□□□ -0.37
TPM1-232ENST00000561425 HIST1H2BLQ99880 126 aa12.71□□□□□ -0.37
TPM1-232ENST00000561425 SMIM1B2RUZ4 78 aa12.7□□□□□ -0.38
TPM1-232ENST00000561425 CKS1BP61024 79 aa12.7□□□□□ -0.38
TPM1-232ENST00000561425 C9orf129Q5T035 196 aaKnown RBP12.7□□□□□ -0.38
TPM1-232ENST00000561425 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
TPM1-232ENST00000561425 CHTOPQ9Y3Y2 248 aaKnown RBP12.7□□□□□ -0.38
TPM1-232ENST00000561425 KRTAP11-1Q8IUC1 163 aa12.69□□□□□ -0.38
TPM1-232ENST00000561425 TNXBP22105 4242 aa12.68□□□□□ -0.38
TPM1-232ENST00000561425 F8VRH5 84 aa12.68□□□□□ -0.38
TPM1-232ENST00000561425 KRTDAPP60985 99 aa12.68□□□□□ -0.38
TPM1-232ENST00000561425 ODF1Q14990 250 aa12.68□□□□□ -0.38
TPM1-232ENST00000561425 LINC00469Q8N7U9 141 aa12.68□□□□□ -0.38
TPM1-232ENST00000561425 SYS1-DBNDD2H3BUS1 97 aa12.67□□□□□ -0.38
TPM1-232ENST00000561425 CXCL5P42830 114 aa12.67□□□□□ -0.38
TPM1-232ENST00000561425 C3orf79P0CE67 100 aa12.66□□□□□ -0.38
TPM1-232ENST00000561425 IGLC3P0DOY3 106 aa12.65□□□□□ -0.38
TPM1-232ENST00000561425 KRTAP10-8P60410 259 aa12.65□□□□□ -0.38
TPM1-232ENST00000561425 PET117Q6UWS5 81 aa12.65□□□□□ -0.38
TPM1-232ENST00000561425 FAM19A5Q7Z5A7 132 aaPredicted RBP12.65□□□□□ -0.38
TPM1-232ENST00000561425 REG3GQ6UW15 175 aa12.64□□□□□ -0.39
TPM1-232ENST00000561425 HMCN2Q8NDA2 5059 aa12.64□□□□□ -0.39
TPM1-232ENST00000561425 C20orf202A1L168 122 aa12.63□□□□□ -0.39
TPM1-232ENST00000561425 C1orf137Q5JT78 98 aa12.63□□□□□ -0.39
TPM1-232ENST00000561425 COX7B2Q8TF08 81 aa12.63□□□□□ -0.39
TPM1-232ENST00000561425 C11orf86A6NJI1 115 aa12.61□□□□□ -0.39
TPM1-232ENST00000561425 M0QXV9 152 aa12.61□□□□□ -0.39
TPM1-232ENST00000561425 IGLV7-43P04211 117 aa12.61□□□□□ -0.39
TPM1-232ENST00000561425 PLNP26678 52 aa12.61□□□□□ -0.39
TPM1-232ENST00000561425 PMCHL2Q9BQD1 86 aa12.61□□□□□ -0.39
TPM1-232ENST00000561425 IGLV5-39A0A0G2JS06 123 aa12.6□□□□□ -0.39
TPM1-232ENST00000561425 H3BRM9 83 aa12.6□□□□□ -0.39
TPM1-232ENST00000561425 DPM2O94777 84 aa12.6□□□□□ -0.39
TPM1-232ENST00000561425 SPINK8P0C7L1 97 aa12.6□□□□□ -0.39
TPM1-232ENST00000561425 LINC01545Q5VT33 79 aa12.6□□□□□ -0.39
TPM1-232ENST00000561425 TMEM170BQ5T4T1 132 aa12.59□□□□□ -0.39
TPM1-232ENST00000561425 IGKCP01834 107 aa12.58□□□□□ -0.4
TPM1-232ENST00000561425 ZNF22P17026 224 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms