RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 HIST2H2BEQ16778 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 LBHQ53QV2 105 aaPredicted RBP5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST3H2BBQ8N257 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 Q8N8P6 123 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 NRACQ8N912 160 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST1H2BHQ93079 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST1H2BNQ99877 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST1H2BMQ99879 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 ALKBH7Q9BT30 221 aaPredicted RBP5.68□□□□□ -1.5
HERC1-210ENST00000560897 A0A1W2PNN7 141 aa5.67□□□□□ -1.5
HERC1-210ENST00000560897 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
HERC1-210ENST00000560897 H7C423 109 aa5.67□□□□□ -1.5
HERC1-210ENST00000560897 K7EMI3 77 aa5.67□□□□□ -1.5
HERC1-210ENST00000560897 IFI27P40305 119 aaPredicted RBP5.67□□□□□ -1.5
HERC1-210ENST00000560897 RPL32P62910 135 aaKnown RBP5.67□□□□□ -1.5
HERC1-210ENST00000560897 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
HERC1-210ENST00000560897 C9orf116Q5BN46 136 aaPredicted RBP5.67□□□□□ -1.5
HERC1-210ENST00000560897 PHF5AQ7RTV0 110 aaKnown RBP5.67□□□□□ -1.5
HERC1-210ENST00000560897 CHCHD10Q8WYQ3 142 aaPredicted RBP5.67□□□□□ -1.5
HERC1-210ENST00000560897 LINC01549A6NIU2 74 aa5.66□□□□□ -1.5
HERC1-210ENST00000560897 IFITM10A6NMD0 228 aa5.66□□□□□ -1.5
HERC1-210ENST00000560897 LINC00614P0C842 121 aa5.66□□□□□ -1.5
HERC1-210ENST00000560897 FGF6P10767 208 aa5.66□□□□□ -1.5
HERC1-210ENST00000560897 PYY3Q5JQD4 70 aa5.66□□□□□ -1.5
HERC1-210ENST00000560897 OR5A1Q8NGJ0 315 aa5.66□□□□□ -1.5
HERC1-210ENST00000560897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.65□□□□□ -1.5
HERC1-210ENST00000560897 IGHV1-58A0A0C4DH39 117 aa5.65□□□□□ -1.5
HERC1-210ENST00000560897 IGKV2-29A2NJV5 120 aaPredicted RBP5.65□□□□□ -1.5
HERC1-210ENST00000560897 HSBP1O75506 76 aa5.65□□□□□ -1.5
HERC1-210ENST00000560897 NDUFA6P56556 154 aa5.65□□□□□ -1.5
HERC1-210ENST00000560897 SYCNQ0VAF6 134 aa5.65□□□□□ -1.5
HERC1-210ENST00000560897 PAPPA-AS1Q5QFB9 102 aa5.65□□□□□ -1.5
HERC1-210ENST00000560897 Q6ZN92 141 aa5.65□□□□□ -1.5
HERC1-210ENST00000560897 LINC00469Q8N7U9 141 aa5.65□□□□□ -1.5
HERC1-210ENST00000560897 CYSLTR1Q9Y271 337 aa5.65□□□□□ -1.5
HERC1-210ENST00000560897 TSHBP01222 138 aa5.64□□□□□ -1.51
HERC1-210ENST00000560897 ZNF25P17030 456 aaPredicted RBP5.64□□□□□ -1.51
HERC1-210ENST00000560897 RPL18AQ02543 176 aaKnown RBP5.64□□□□□ -1.51
HERC1-210ENST00000560897 JOSD1Q15040 202 aaPredicted RBP5.64□□□□□ -1.51
HERC1-210ENST00000560897 LINC00526Q96FQ7 95 aa5.64□□□□□ -1.51
HERC1-210ENST00000560897 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
HERC1-210ENST00000560897 IGLV7-46A0A075B6I9 117 aa5.63□□□□□ -1.51
HERC1-210ENST00000560897 TSTD3H0UI37 97 aa5.63□□□□□ -1.51
HERC1-210ENST00000560897 C2orf66Q6UXQ4 117 aa5.63□□□□□ -1.51
HERC1-210ENST00000560897 MRPL52Q86TS9 123 aaKnown RBP5.63□□□□□ -1.51
HERC1-210ENST00000560897 C18orf32Q8TCD1 76 aa5.63□□□□□ -1.51
HERC1-210ENST00000560897 CHCHD1Q96BP2 118 aaKnown RBP5.63□□□□□ -1.51
HERC1-210ENST00000560897 PACRGQ96M98 296 aaPredicted RBP5.63□□□□□ -1.51
HERC1-210ENST00000560897 SCGB3A1Q96QR1 104 aa5.63□□□□□ -1.51
HERC1-210ENST00000560897 HIST1H2BLQ99880 126 aa5.63□□□□□ -1.51
HERC1-210ENST00000560897 CFC1BP0CG36 223 aa5.62□□□□□ -1.51
HERC1-210ENST00000560897 OR10D4PQ8NGN7 298 aa5.62□□□□□ -1.51
HERC1-210ENST00000560897 C2orf88Q9BSF0 95 aa5.62□□□□□ -1.51
HERC1-210ENST00000560897 VCX2Q9H322 139 aa5.62□□□□□ -1.51
HERC1-210ENST00000560897 SPANXA1Q9NS26 97 aa5.62□□□□□ -1.51
HERC1-210ENST00000560897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.61□□□□□ -1.51
HERC1-210ENST00000560897 ESDP10768 282 aa5.61□□□□□ -1.51
HERC1-210ENST00000560897 XCL1P47992 114 aa5.61□□□□□ -1.51
HERC1-210ENST00000560897 FOXI1Q12951 378 aa5.61□□□□□ -1.51
HERC1-210ENST00000560897 SS18Q15532 418 aa5.61□□□□□ -1.51
HERC1-210ENST00000560897 TYMSOSQ8TAI1 123 aa5.61□□□□□ -1.51
HERC1-210ENST00000560897 F8WDY8 70 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 ATP5LO75964 103 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 APOMO95445 188 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 HBDP02042 147 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 DDTP30046 118 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 UBE2BP63146 152 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 TEX43Q6ZNM6 134 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 LINC00173Q6ZV60 143 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 TMEM141Q96I45 108 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 TIMM21Q9BVV7 248 aa5.6□□□□□ -1.51
HERC1-210ENST00000560897 IGLV4-69A0A075B6H9 119 aa5.59□□□□□ -1.51
HERC1-210ENST00000560897 FABP4P15090 132 aa5.59□□□□□ -1.51
HERC1-210ENST00000560897 RPL39P62891 51 aaKnown RBP5.59□□□□□ -1.51
HERC1-210ENST00000560897 ERASQ7Z444 233 aa5.59□□□□□ -1.51
HERC1-210ENST00000560897 TOMM6Q96B49 74 aa5.59□□□□□ -1.51
HERC1-210ENST00000560897 HSPB8Q9UJY1 196 aa5.59□□□□□ -1.51
HERC1-210ENST00000560897 UBE2D4Q9Y2X8 147 aa5.59□□□□□ -1.51
HERC1-210ENST00000560897 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
HERC1-210ENST00000560897 TRAV13-1A0A0B4J241 112 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 CCL25O15444 150 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 NPSP0C0P6 89 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 SEC11AP67812 179 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 LINC00337Q8N6G1 96 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 C14orf144Q96I85 54 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 CAMK2N2Q96S95 79 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 CDC42SE2Q9NRR3 84 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 PYGO1Q9Y3Y4 419 aa5.58□□□□□ -1.52
HERC1-210ENST00000560897 H0Y8G0 127 aa5.57□□□□□ -1.52
HERC1-210ENST00000560897 SERF1AO75920 110 aa5.57□□□□□ -1.52
HERC1-210ENST00000560897 MRPS36P82909 103 aaKnown RBP5.57□□□□□ -1.52
HERC1-210ENST00000560897 PMCHL1Q16048 86 aa5.57□□□□□ -1.52
HERC1-210ENST00000560897 FAM19A2Q8N3H0 131 aa5.57□□□□□ -1.52
HERC1-210ENST00000560897 TIMM17AQ99595 171 aa5.57□□□□□ -1.52
HERC1-210ENST00000560897 PPDPFQ9H3Y8 114 aa5.57□□□□□ -1.52
HERC1-210ENST00000560897 LINC01546A6NGU7 62 aa5.56□□□□□ -1.52
HERC1-210ENST00000560897 ASB16-AS1Q495Z4 193 aa5.56□□□□□ -1.52
HERC1-210ENST00000560897 RNASE13Q5GAN3 156 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms