RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
RABGGTA-217ENST00000560521 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
RABGGTA-217ENST00000560521 UNQ6190/PRO20217Q6UXQ8 127 aa5.17□□□□□ -1.58
RABGGTA-217ENST00000560521 SMIM15Q7Z3B0 74 aa5.17□□□□□ -1.58
RABGGTA-217ENST00000560521 MRPL18Q9H0U6 180 aaKnown RBP5.17□□□□□ -1.58
RABGGTA-217ENST00000560521 LINC01549A6NIU2 74 aa5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 NDUFA1O15239 70 aa5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 NDUFA6P56556 154 aa5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 C9orf129Q5T035 196 aaKnown RBP5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 LINC00173Q6ZV60 143 aa5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 LINC00518Q8N0U6 118 aa5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 ORAOV1Q8WV07 137 aa5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 CHCHD1Q96BP2 118 aaKnown RBP5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 ST20Q9HBF5 79 aa5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 UBE2D4Q9Y2X8 147 aa5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 CSDC2Q9Y534 153 aaKnown RBP5.16□□□□□ -1.58
RABGGTA-217ENST00000560521 A0A1B0GXF2 115 aa5.15□□□□□ -1.59
RABGGTA-217ENST00000560521 K7EMI3 77 aa5.15□□□□□ -1.59
RABGGTA-217ENST00000560521 NUPR1O60356 82 aa5.15□□□□□ -1.59
RABGGTA-217ENST00000560521 TMEM136Q6ZRR5 245 aa5.15□□□□□ -1.59
RABGGTA-217ENST00000560521 HIST3H2BBQ8N257 126 aa5.15□□□□□ -1.59
RABGGTA-217ENST00000560521 IGHV3OR16-9A0A0B4J2B5 98 aa5.14□□□□□ -1.59
RABGGTA-217ENST00000560521 TRBV27A0A0K0K1C4 114 aa5.14□□□□□ -1.59
RABGGTA-217ENST00000560521 G0S2P27469 103 aa5.14□□□□□ -1.59
RABGGTA-217ENST00000560521 BAGE3Q86Y29 109 aa5.14□□□□□ -1.59
RABGGTA-217ENST00000560521 PPDPFQ9H3Y8 114 aa5.14□□□□□ -1.59
RABGGTA-217ENST00000560521 KIAA0087Q14695 138 aa5.13□□□□□ -1.59
RABGGTA-217ENST00000560521 ASB16-AS1Q495Z4 193 aa5.13□□□□□ -1.59
RABGGTA-217ENST00000560521 Q6ZUT4 128 aa5.13□□□□□ -1.59
RABGGTA-217ENST00000560521 LINC00304Q8N9R0 145 aa5.13□□□□□ -1.59
RABGGTA-217ENST00000560521 FAM104AQ969W3 186 aa5.13□□□□□ -1.59
RABGGTA-217ENST00000560521 C12orf57Q99622 126 aa5.13□□□□□ -1.59
RABGGTA-217ENST00000560521 TCAPO15273 167 aa5.12□□□□□ -1.59
RABGGTA-217ENST00000560521 JOSD1Q15040 202 aaPredicted RBP5.12□□□□□ -1.59
RABGGTA-217ENST00000560521 LINC00242Q5T6M2 205 aa5.12□□□□□ -1.59
RABGGTA-217ENST00000560521 HIST1H2BLQ99880 126 aa5.12□□□□□ -1.59
RABGGTA-217ENST00000560521 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
RABGGTA-217ENST00000560521 C22orf24Q9Y442 160 aa5.12□□□□□ -1.59
RABGGTA-217ENST00000560521 C20orf202A1L168 122 aa5.11□□□□□ -1.59
RABGGTA-217ENST00000560521 NDUFC2-KCTD14E9PQ53 114 aa5.11□□□□□ -1.59
RABGGTA-217ENST00000560521 TSTD3H0UI37 97 aa5.11□□□□□ -1.59
RABGGTA-217ENST00000560521 RPL28P46779 137 aaKnown RBP5.11□□□□□ -1.59
RABGGTA-217ENST00000560521 PMCHL1Q16048 86 aa5.11□□□□□ -1.59
RABGGTA-217ENST00000560521 ORMDL3Q8N138 153 aa5.11□□□□□ -1.59
RABGGTA-217ENST00000560521 HSPB8Q9UJY1 196 aa5.11□□□□□ -1.59
RABGGTA-217ENST00000560521 TRBV30A0A0K0K1B3 111 aa5.1□□□□□ -1.59
RABGGTA-217ENST00000560521 VCYO14598 125 aa5.1□□□□□ -1.59
RABGGTA-217ENST00000560521 HSBP1O75506 76 aa5.1□□□□□ -1.59
RABGGTA-217ENST00000560521 FABP4P15090 132 aa5.1□□□□□ -1.59
RABGGTA-217ENST00000560521 SMAGPQ0VAQ4 97 aa5.1□□□□□ -1.59
RABGGTA-217ENST00000560521 MRPL54Q6P161 138 aaKnown RBP5.1□□□□□ -1.59
RABGGTA-217ENST00000560521 C2orf82Q6UX34 121 aa5.1□□□□□ -1.59
RABGGTA-217ENST00000560521 ALKBH7Q9BT30 221 aaPredicted RBP5.1□□□□□ -1.59
RABGGTA-217ENST00000560521 TIMM21Q9BVV7 248 aa5.1□□□□□ -1.59
RABGGTA-217ENST00000560521 PRSS47A8MTI9 375 aa5.09□□□□□ -1.59
RABGGTA-217ENST00000560521 BCE1O60756 84 aa5.09□□□□□ -1.59
RABGGTA-217ENST00000560521 LINC00614P0C842 121 aa5.09□□□□□ -1.59
RABGGTA-217ENST00000560521 FCER1GP30273 86 aa5.09□□□□□ -1.59
RABGGTA-217ENST00000560521 CTAG1AP78358 180 aa5.09□□□□□ -1.59
RABGGTA-217ENST00000560521 LBHQ53QV2 105 aaPredicted RBP5.09□□□□□ -1.59
RABGGTA-217ENST00000560521 FAM104BQ5XKR9 115 aa5.09□□□□□ -1.59
RABGGTA-217ENST00000560521 NXT2Q9NPJ8 142 aaKnown RBP5.09□□□□□ -1.59
RABGGTA-217ENST00000560521 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
RABGGTA-217ENST00000560521 SMKR1H3BMG3 65 aa5.08□□□□□ -1.6
RABGGTA-217ENST00000560521 RPL39P62891 51 aaKnown RBP5.08□□□□□ -1.6
RABGGTA-217ENST00000560521 FAM229BQ4G0N7 80 aa5.08□□□□□ -1.6
RABGGTA-217ENST00000560521 C18orf32Q8TCD1 76 aa5.08□□□□□ -1.6
RABGGTA-217ENST00000560521 LINC01546A6NGU7 62 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 SERF1AO75920 110 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 SUMO2P61956 95 aaKnown RBP5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 RPL32P62910 135 aaKnown RBP5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 KRTAP13-3Q3SY46 172 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 FA2HQ7L5A8 372 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 AMN1Q8IY45 258 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 LINC00337Q8N6G1 96 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 LINC00469Q8N7U9 141 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 NRACQ8N912 160 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 C20orf78Q9BR46 151 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 MAP1LC3AQ9H492 121 aa5.07□□□□□ -1.6
RABGGTA-217ENST00000560521 CKS2P33552 79 aa5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 MT1HP80294 61 aa5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 PYY3Q5JQD4 70 aa5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 MRPL55Q7Z7F7 128 aaKnown RBP5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 KRTAP13-1Q8IUC0 172 aa5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 KIR2DL4Q99706 377 aa5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 MAP1LC3CQ9BXW4 147 aa5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 XAGE1AQ9HD64 81 aa5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 TP73-AS1Q9UF72 201 aa5.06□□□□□ -1.6
RABGGTA-217ENST00000560521 IGKV2D-26A0A0A0MRZ7 120 aa5.05□□□□□ -1.6
RABGGTA-217ENST00000560521 RPL37AP8A6NKH3 93 aa5.05□□□□□ -1.6
RABGGTA-217ENST00000560521 LEPROTL1O95214 131 aa5.05□□□□□ -1.6
RABGGTA-217ENST00000560521 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
RABGGTA-217ENST00000560521 MRPS36P82909 103 aaKnown RBP5.05□□□□□ -1.6
RABGGTA-217ENST00000560521 PET117Q6UWS5 81 aa5.05□□□□□ -1.6
RABGGTA-217ENST00000560521 PRELID3AQ96N28 172 aa5.05□□□□□ -1.6
RABGGTA-217ENST00000560521 LINC00167Q96N53 147 aa5.05□□□□□ -1.6
RABGGTA-217ENST00000560521 IFITM10A6NMD0 228 aa5.04□□□□□ -1.6
RABGGTA-217ENST00000560521 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms