RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 SAA2P0DJI9 122 aaPredicted RBP-0.23□□□□□ -2.45
SPG11-222ENST00000560435 KLK9Q2XQG4 91 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 LCN9Q8WX39 176 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 TMEM203Q969S6 136 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 USMG5Q96IX5 58 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 PRO1933Q9H354 126 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 MANBALQ9NQG1 85 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 TRANK1O15050 2925 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 IQSEC2Q5JU85 1478 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 KIAA0556O60303 1618 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 PCNX1Q96RV3 2341 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 CUL7Q14999 1698 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 A0A0G2JMZ2 1700 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 TACC2O95359 2948 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 LINC00587B1AMM8 73 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 LOC730098B7Z3J9 87 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 TRAPPC2P0DI81 140 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 TRAPPC2BP0DI82 140 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 COX8AP10176 69 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 SPRR2AP35326 72 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 KRTAP6-2Q3LI66 62 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 SFTA2Q6UW10 78 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 SVBPQ8N300 66 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 FDCSPQ8NFU4 85 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 CGREF1Q99674 301 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 PZPP20742 1482 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 PLEKHH2Q8IVE3 1493 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 ARHGAP5Q13017 1502 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 HIVEP1P15822 2718 aa-0.24□□□□□ -2.45
SPG11-222ENST00000560435 FLGP20930 4061 aaPredicted RBP-0.24□□□□□ -2.45
SPG11-222ENST00000560435 LAMA5O15230 3695 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 hADV29S1A0JD25 119 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 C7orf77A4D0Y5 90 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 CPSF4LA6NMK7 179 aaKnown RBP-0.25□□□□□ -2.45
SPG11-222ENST00000560435 S100A1P23297 94 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 KRTDAPP60985 99 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 MRPS10P82664 201 aaKnown RBP-0.25□□□□□ -2.45
SPG11-222ENST00000560435 HSD52Q0P140 79 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 C12orf57Q99622 126 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 CRIPTQ9P021 101 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 GNG8Q9UK08 70 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 ABCC5O15440 1437 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 NKTRP30414 1462 aaKnown RBP-0.25□□□□□ -2.45
SPG11-222ENST00000560435 SLIT1O75093 1534 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 NRKQ7Z2Y5 1582 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 HERC1Q15751 4861 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 SPHKAPQ2M3C7 1700 aa-0.25□□□□□ -2.45
SPG11-222ENST00000560435 XRN1Q8IZH2 1706 aaKnown RBP-0.25□□□□□ -2.45
SPG11-222ENST00000560435 HTTP42858 3142 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 TCHHQ07283 1943 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 PAPPA2Q9BXP8 1791 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 FMN2Q9NZ56 1722 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 SCN7AQ01118 1682 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 EIF4G3O43432 1585 aaKnown RBP-0.26□□□□□ -2.45
SPG11-222ENST00000560435 CCDC141Q6ZP82 1450 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 EDC4Q6P2E9 1401 aaKnown RBP-0.26□□□□□ -2.45
SPG11-222ENST00000560435 TRBV25-1A0A075B6N4 114 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 A0A087WVE0 104 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 A0A1B0GU69 56 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 CRYM-AS1A6NIL9 109 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 SYS1-DBNDD2H3BUS1 97 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 H7BZZ5 65 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 SPRR2EP22531 72 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 SNCAP37840 140 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 SEC11AP67812 179 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 SARNPP82979 210 aaKnown RBP-0.26□□□□□ -2.45
SPG11-222ENST00000560435 KRTAP19-8Q3LI54 63 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 H1FX-AS1Q4G0G2 97 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 C6orf201Q7Z4U5 140 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 C9orf62Q8N4C0 152 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 TRGV9Q99603 122 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 FXYD6Q9H0Q3 95 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 CACFD1Q9UGQ2 172 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 APLNQ9ULZ1 77 aa-0.26□□□□□ -2.45
SPG11-222ENST00000560435 TNRC18O15417 2968 aaPredicted RBP-0.27□□□□□ -2.45
SPG11-222ENST00000560435 NUP188Q5SRE5 1749 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 MARF1Q9Y4F3 1742 aaKnown RBP-0.27□□□□□ -2.45
SPG11-222ENST00000560435 ITPR3Q14573 2671 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 PRDM15P57071 1507 aaPredicted RBP-0.27□□□□□ -2.45
SPG11-222ENST00000560435 ZFYVE16Q7Z3T8 1539 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 FAM135AQ9P2D6 1515 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 NLRP1Q9C000 1473 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 NCOA3Q9Y6Q9 1424 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 A0A0G2JND7 137 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 C20orf202A1L168 122 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 I3L3M4 83 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 NDUFC1O43677 76 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 MPC2O95563 127 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 ARMS2P0C7Q2 107 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 PMCHL1Q16048 86 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 GTF2H5Q6ZYL4 71 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 CREBBPQ92793 2442 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 CHD1O14646 1710 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 TOPAZ1Q8N9V7 1692 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 ZZEF1O43149 2961 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 TOP2BQ02880 1626 aa-0.27□□□□□ -2.45
SPG11-222ENST00000560435 PKHD1P08F94 4074 aa-0.28□□□□□ -2.45
SPG11-222ENST00000560435 MLH3Q9UHC1 1453 aa-0.28□□□□□ -2.45
SPG11-222ENST00000560435 HECTD1Q9ULT8 2610 aa-0.28□□□□□ -2.45
SPG11-222ENST00000560435 KMT2CQ8NEZ4 4911 aaKnown RBP-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms