RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 TEX43Q6ZNM6 134 aa9.45□□□□□ -0.9
HERC1-207ENST00000560316 Q8IZM0 81 aa9.45□□□□□ -0.9
HERC1-207ENST00000560316 ALKBH7Q9BT30 221 aaPredicted RBP9.45□□□□□ -0.9
HERC1-207ENST00000560316 EIF5A2Q9GZV4 153 aaKnown RBP9.45□□□□□ -0.9
HERC1-207ENST00000560316 SLC51BQ86UW2 128 aa9.44□□□□□ -0.9
HERC1-207ENST00000560316 BATF3Q9NR55 127 aa9.44□□□□□ -0.9
HERC1-207ENST00000560316 RAB5AP20339 215 aa9.43□□□□□ -0.9
HERC1-207ENST00000560316 PNRC1Q12796 327 aaPredicted RBP9.43□□□□□ -0.9
HERC1-207ENST00000560316 FAM74A3Q4VXF1 159 aa9.43□□□□□ -0.9
HERC1-207ENST00000560316 C3orf22Q8N5N4 141 aa9.43□□□□□ -0.9
HERC1-207ENST00000560316 F8VRH5 84 aa9.42□□□□□ -0.9
HERC1-207ENST00000560316 KRTAP13-3Q3SY46 172 aa9.42□□□□□ -0.9
HERC1-207ENST00000560316 C2orf88Q9BSF0 95 aa9.42□□□□□ -0.9
HERC1-207ENST00000560316 XP32Q5T750 250 aa9.41□□□□□ -0.9
HERC1-207ENST00000560316 PRLHP81277 87 aa9.4□□□□□ -0.9
HERC1-207ENST00000560316 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
HERC1-207ENST00000560316 FP248Q71RG6 208 aaPredicted RBP9.4□□□□□ -0.9
HERC1-207ENST00000560316 IGKV2-28A0A075B6P5 120 aa9.39□□□□□ -0.91
HERC1-207ENST00000560316 SMIM27A0A1W2PRY6 76 aa9.39□□□□□ -0.91
HERC1-207ENST00000560316 SCO1O75880 301 aa9.39□□□□□ -0.91
HERC1-207ENST00000560316 IGKV2D-28P01615 120 aa9.39□□□□□ -0.91
HERC1-207ENST00000560316 AMELXQ99217 191 aa9.39□□□□□ -0.91
HERC1-207ENST00000560316 A0A1B0GW15 77 aa9.38□□□□□ -0.91
HERC1-207ENST00000560316 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
HERC1-207ENST00000560316 MRPL54Q6P161 138 aaKnown RBP9.38□□□□□ -0.91
HERC1-207ENST00000560316 NKAPP1Q8N9T2 125 aa9.38□□□□□ -0.91
HERC1-207ENST00000560316 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
HERC1-207ENST00000560316 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
HERC1-207ENST00000560316 SRP19P09132 144 aaKnown RBP9.37□□□□□ -0.91
HERC1-207ENST00000560316 SEC61BP60468 96 aaKnown RBP9.37□□□□□ -0.91
HERC1-207ENST00000560316 VCX2Q9H322 139 aa9.37□□□□□ -0.91
HERC1-207ENST00000560316 F8W036 122 aa9.36□□□□□ -0.91
HERC1-207ENST00000560316 PPBPP02775 128 aa9.36□□□□□ -0.91
HERC1-207ENST00000560316 RPL23P62829 140 aaKnown RBP9.36□□□□□ -0.91
HERC1-207ENST00000560316 SPAG11AQ6PDA7 123 aa9.36□□□□□ -0.91
HERC1-207ENST00000560316 ALKAL2Q6UX46 152 aa9.36□□□□□ -0.91
HERC1-207ENST00000560316 C2orf66Q6UXQ4 117 aa9.36□□□□□ -0.91
HERC1-207ENST00000560316 FAM19A1Q7Z5A9 133 aa9.36□□□□□ -0.91
HERC1-207ENST00000560316 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
HERC1-207ENST00000560316 FAM19A3Q7Z5A8 133 aa9.35□□□□□ -0.91
HERC1-207ENST00000560316 ORMDL3Q8N138 153 aa9.35□□□□□ -0.91
HERC1-207ENST00000560316 A0A1B0GXF2 115 aa9.34□□□□□ -0.91
HERC1-207ENST00000560316 CXCL5P42830 114 aa9.34□□□□□ -0.91
HERC1-207ENST00000560316 RAB5BP61020 215 aa9.34□□□□□ -0.91
HERC1-207ENST00000560316 ADIRFQ15847 76 aa9.34□□□□□ -0.91
HERC1-207ENST00000560316 TMEM136Q6ZRR5 245 aa9.34□□□□□ -0.91
HERC1-207ENST00000560316 PLEKHB2Q96CS7 222 aa9.34□□□□□ -0.91
HERC1-207ENST00000560316 PRELID3AQ96N28 172 aa9.34□□□□□ -0.91
HERC1-207ENST00000560316 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
HERC1-207ENST00000560316 TMEM238C9JI98 176 aa9.33□□□□□ -0.92
HERC1-207ENST00000560316 S100A8P05109 93 aa9.33□□□□□ -0.92
HERC1-207ENST00000560316 HERVK_113P63121 156 aa9.33□□□□□ -0.92
HERC1-207ENST00000560316 TMEM126AQ9H061 195 aa9.32□□□□□ -0.92
HERC1-207ENST00000560316 GEMIN7Q9H840 131 aaKnown RBP9.32□□□□□ -0.92
HERC1-207ENST00000560316 IGIPA6NJ69 53 aa9.3□□□□□ -0.92
HERC1-207ENST00000560316 CBLN2Q8IUK8 224 aa9.3□□□□□ -0.92
HERC1-207ENST00000560316 TCTE3Q8IZS6 198 aa9.3□□□□□ -0.92
HERC1-207ENST00000560316 PRSS47A8MTI9 375 aa9.29□□□□□ -0.92
HERC1-207ENST00000560316 SMIM1B2RUZ4 78 aa9.29□□□□□ -0.92
HERC1-207ENST00000560316 SEC11AP67812 179 aa9.29□□□□□ -0.92
HERC1-207ENST00000560316 DAND5Q8N907 189 aa9.29□□□□□ -0.92
HERC1-207ENST00000560316 COX7B2Q8TF08 81 aa9.29□□□□□ -0.92
HERC1-207ENST00000560316 M0R378 163 aa9.28□□□□□ -0.92
HERC1-207ENST00000560316 MT1HP80294 61 aa9.28□□□□□ -0.92
HERC1-207ENST00000560316 MAP1LC3AQ9H492 121 aa9.28□□□□□ -0.92
HERC1-207ENST00000560316 NPSP0C0P6 89 aa9.27□□□□□ -0.93
HERC1-207ENST00000560316 KRTAP19-2Q3LHN2 52 aa9.27□□□□□ -0.93
HERC1-207ENST00000560316 Q8N8P6 123 aa9.27□□□□□ -0.93
HERC1-207ENST00000560316 Q8NBF4 154 aa9.27□□□□□ -0.93
HERC1-207ENST00000560316 HIGD2AQ9BW72 106 aa9.27□□□□□ -0.93
HERC1-207ENST00000560316 NAT8Q9UHE5 227 aa9.27□□□□□ -0.93
HERC1-207ENST00000560316 PDZD11Q5EBL8 140 aa9.26□□□□□ -0.93
HERC1-207ENST00000560316 SPRR4Q96PI1 79 aa9.26□□□□□ -0.93
HERC1-207ENST00000560316 ORMDL2Q53FV1 153 aa9.25□□□□□ -0.93
HERC1-207ENST00000560316 GNB1LQ9BYB4 327 aa9.25□□□□□ -0.93
HERC1-207ENST00000560316 C9JQL5 133 aa9.24□□□□□ -0.93
HERC1-207ENST00000560316 VPREB1P12018 145 aa9.24□□□□□ -0.93
HERC1-207ENST00000560316 LAMTOR2Q9Y2Q5 125 aa9.24□□□□□ -0.93
HERC1-207ENST00000560316 CFC1BP0CG36 223 aa9.23□□□□□ -0.93
HERC1-207ENST00000560316 PAPPA-AS1Q5QFB9 102 aa9.23□□□□□ -0.93
HERC1-207ENST00000560316 SPINK8P0C7L1 97 aa9.22□□□□□ -0.93
HERC1-207ENST00000560316 PFN2P35080 140 aa9.22□□□□□ -0.93
HERC1-207ENST00000560316 KRTAP4-8Q9BYQ9 185 aa9.22□□□□□ -0.93
HERC1-207ENST00000560316 SPINK1P00995 79 aa9.21□□□□□ -0.94
HERC1-207ENST00000560316 TIMM17AQ99595 171 aa9.21□□□□□ -0.94
HERC1-207ENST00000560316 A0A1B0GVG6 124 aa9.2□□□□□ -0.94
HERC1-207ENST00000560316 ATP5L2Q7Z4Y8 100 aa9.2□□□□□ -0.94
HERC1-207ENST00000560316 Q8NDZ9 215 aa9.2□□□□□ -0.94
HERC1-207ENST00000560316 IGLV5-45A0A087WSX0 123 aa9.19□□□□□ -0.94
HERC1-207ENST00000560316 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
HERC1-207ENST00000560316 ATP5LO75964 103 aa9.19□□□□□ -0.94
HERC1-207ENST00000560316 SND1-IT1Q9HBX3 110 aa9.19□□□□□ -0.94
HERC1-207ENST00000560316 NDUFA12Q9UI09 145 aa9.19□□□□□ -0.94
HERC1-207ENST00000560316 KRTAP10-6P60371 365 aaPredicted RBP9.18□□□□□ -0.94
HERC1-207ENST00000560316 RAB14P61106 215 aa9.18□□□□□ -0.94
HERC1-207ENST00000560316 TOMM6Q96B49 74 aa9.18□□□□□ -0.94
HERC1-207ENST00000560316 K7EMI3 77 aa9.17□□□□□ -0.94
HERC1-207ENST00000560316 RPL24P83731 157 aaKnown RBP9.17□□□□□ -0.94
HERC1-207ENST00000560316 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
HERC1-207ENST00000560316 ADCYAP1P18509 176 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms