RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 NMUP48645 174 aa8.9□□□□□ -0.98
HMBOX1-213ENST00000560269 CKS1BP61024 79 aa8.9□□□□□ -0.98
HMBOX1-213ENST00000560269 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
HMBOX1-213ENST00000560269 C2orf82Q6UX34 121 aa8.9□□□□□ -0.98
HMBOX1-213ENST00000560269 ZNF625Q96I27 306 aaPredicted RBP8.9□□□□□ -0.98
HMBOX1-213ENST00000560269 PAM16Q9Y3D7 125 aa8.9□□□□□ -0.98
HMBOX1-213ENST00000560269 NDUFA1O15239 70 aa8.89□□□□□ -0.99
HMBOX1-213ENST00000560269 SPATA45Q537H7 98 aa8.89□□□□□ -0.99
HMBOX1-213ENST00000560269 SFTA2Q6UW10 78 aa8.89□□□□□ -0.99
HMBOX1-213ENST00000560269 CAMK2N2Q96S95 79 aa8.89□□□□□ -0.99
HMBOX1-213ENST00000560269 NDUFA12Q9UI09 145 aa8.89□□□□□ -0.99
HMBOX1-213ENST00000560269 PKD1P98161 4303 aa8.89□□□□□ -0.99
HMBOX1-213ENST00000560269 SYCNQ0VAF6 134 aa8.88□□□□□ -0.99
HMBOX1-213ENST00000560269 C10orf25Q5T742 122 aa8.88□□□□□ -0.99
HMBOX1-213ENST00000560269 UNQ6190/PRO20217Q6UXQ8 127 aa8.88□□□□□ -0.99
HMBOX1-213ENST00000560269 Q6ZRU5 148 aa8.88□□□□□ -0.99
HMBOX1-213ENST00000560269 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
HMBOX1-213ENST00000560269 MYMXA0A1B0GTQ4 84 aa8.87□□□□□ -0.99
HMBOX1-213ENST00000560269 S100A12P80511 92 aa8.87□□□□□ -0.99
HMBOX1-213ENST00000560269 PCP2Q8IVA1 136 aa8.87□□□□□ -0.99
HMBOX1-213ENST00000560269 TRBV30A0A0K0K1B3 111 aa8.86□□□□□ -0.99
HMBOX1-213ENST00000560269 HERV-K104P63124 156 aa8.86□□□□□ -0.99
HMBOX1-213ENST00000560269 RNF151Q2KHN1 245 aa8.86□□□□□ -0.99
HMBOX1-213ENST00000560269 CARD19Q96LW7 228 aa8.86□□□□□ -0.99
HMBOX1-213ENST00000560269 TTTY13Q9BZ97 58 aa8.86□□□□□ -0.99
HMBOX1-213ENST00000560269 C6orf48Q9UBA6 75 aa8.86□□□□□ -0.99
HMBOX1-213ENST00000560269 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.85□□□□□ -0.99
HMBOX1-213ENST00000560269 ZNF815PA8K554 130 aa8.85□□□□□ -0.99
HMBOX1-213ENST00000560269 COX8AP10176 69 aa8.85□□□□□ -0.99
HMBOX1-213ENST00000560269 C12orf57Q99622 126 aa8.84□□□□□ -0.99
HMBOX1-213ENST00000560269 A0A0J9YXY3 114 aa8.83□□□□□ -1
HMBOX1-213ENST00000560269 DLEU1O43261 78 aa8.83□□□□□ -1
HMBOX1-213ENST00000560269 BOD1L2Q8IYS8 172 aa8.83□□□□□ -1
HMBOX1-213ENST00000560269 LINC00518Q8N0U6 118 aa8.83□□□□□ -1
HMBOX1-213ENST00000560269 C9orf163Q8N9P6 203 aa8.83□□□□□ -1
HMBOX1-213ENST00000560269 C14orf144Q96I85 54 aa8.83□□□□□ -1
HMBOX1-213ENST00000560269 PGPEP1Q9NXJ5 209 aa8.83□□□□□ -1
HMBOX1-213ENST00000560269 DNAH5Q8TE73 4624 aa8.82□□□□□ -1
HMBOX1-213ENST00000560269 A0A1B0GVY2 172 aa8.82□□□□□ -1
HMBOX1-213ENST00000560269 KRTAP10-2P60368 255 aa8.82□□□□□ -1
HMBOX1-213ENST00000560269 C9orf116Q5BN46 136 aaPredicted RBP8.82□□□□□ -1
HMBOX1-213ENST00000560269 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
HMBOX1-213ENST00000560269 IGLV5-52A0A0A0MRZ9 124 aa8.81□□□□□ -1
HMBOX1-213ENST00000560269 LINC00587B1AMM8 73 aa8.81□□□□□ -1
HMBOX1-213ENST00000560269 TLX1NBP0CAT3 122 aa8.81□□□□□ -1
HMBOX1-213ENST00000560269 ERG28Q9UKR5 140 aa8.81□□□□□ -1
HMBOX1-213ENST00000560269 COX17Q14061 63 aa8.8□□□□□ -1
HMBOX1-213ENST00000560269 SLC25A34Q6PIV7 304 aa8.8□□□□□ -1
HMBOX1-213ENST00000560269 NDUFC2-KCTD14E9PQ53 114 aa8.79□□□□□ -1
HMBOX1-213ENST00000560269 TIMM17BO60830 172 aa8.79□□□□□ -1
HMBOX1-213ENST00000560269 FUSP35637 526 aaKnown RBP eCLIP8.79□□□□□ -1
HMBOX1-213ENST00000560269 MEIG1Q5JSS6 88 aa8.79□□□□□ -1
HMBOX1-213ENST00000560269 TP73-AS1Q9UF72 201 aa8.79□□□□□ -1
HMBOX1-213ENST00000560269 LOC107984640A0A0U1RRK4 108 aa8.78□□□□□ -1
HMBOX1-213ENST00000560269 SMIM13P0DJ93 91 aa8.78□□□□□ -1
HMBOX1-213ENST00000560269 PFN2P35080 140 aa8.78□□□□□ -1
HMBOX1-213ENST00000560269 SCGB1D4Q6XE38 83 aa8.78□□□□□ -1
HMBOX1-213ENST00000560269 LITAFQ99732 161 aa8.78□□□□□ -1
HMBOX1-213ENST00000560269 PKIGQ9Y2B9 76 aa8.78□□□□□ -1
HMBOX1-213ENST00000560269 LINC00158P58513 81 aa8.77□□□□□ -1.01
HMBOX1-213ENST00000560269 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
HMBOX1-213ENST00000560269 SDIM1Q6ZPB5 146 aa8.77□□□□□ -1.01
HMBOX1-213ENST00000560269 Q6ZRP5 223 aa8.77□□□□□ -1.01
HMBOX1-213ENST00000560269 LINC01620Q4KN68 170 aa8.76□□□□□ -1.01
HMBOX1-213ENST00000560269 PRO1933Q9H354 126 aa8.76□□□□□ -1.01
HMBOX1-213ENST00000560269 UQCR10Q9UDW1 63 aa8.76□□□□□ -1.01
HMBOX1-213ENST00000560269 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
HMBOX1-213ENST00000560269 TMEM238C9JI98 176 aa8.75□□□□□ -1.01
HMBOX1-213ENST00000560269 GCSHP23434 173 aa8.75□□□□□ -1.01
HMBOX1-213ENST00000560269 RPL18AQ02543 176 aaKnown RBP8.75□□□□□ -1.01
HMBOX1-213ENST00000560269 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
HMBOX1-213ENST00000560269 C2orf91Q6ZV80 131 aa8.75□□□□□ -1.01
HMBOX1-213ENST00000560269 HIGD1BQ9P298 99 aa8.75□□□□□ -1.01
HMBOX1-213ENST00000560269 PKHD1P08F94 4074 aa8.74□□□□□ -1.01
HMBOX1-213ENST00000560269 C16orf90A8MZG2 172 aa8.74□□□□□ -1.01
HMBOX1-213ENST00000560269 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
HMBOX1-213ENST00000560269 MIEN1Q9BRT3 115 aa8.74□□□□□ -1.01
HMBOX1-213ENST00000560269 SPANXDQ9BXN6 97 aa8.74□□□□□ -1.01
HMBOX1-213ENST00000560269 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
HMBOX1-213ENST00000560269 SPANXCQ9NY87 97 aa8.74□□□□□ -1.01
HMBOX1-213ENST00000560269 DYNC1H1Q14204 4646 aaKnown RBP8.74□□□□□ -1.01
HMBOX1-213ENST00000560269 A0A096LNI7 61 aa8.73□□□□□ -1.01
HMBOX1-213ENST00000560269 PTTG1IPP53801 180 aa8.73□□□□□ -1.01
HMBOX1-213ENST00000560269 Q6ZVH6 145 aa8.73□□□□□ -1.01
HMBOX1-213ENST00000560269 SND1-IT1Q9HBX3 110 aa8.73□□□□□ -1.01
HMBOX1-213ENST00000560269 GAGE2BQ13066 116 aa8.72□□□□□ -1.01
HMBOX1-213ENST00000560269 GAGE2EQ4V326 116 aa8.72□□□□□ -1.01
HMBOX1-213ENST00000560269 DAND5Q8N907 189 aa8.72□□□□□ -1.01
HMBOX1-213ENST00000560269 GAGE2DQ9UEU5 116 aa8.72□□□□□ -1.01
HMBOX1-213ENST00000560269 DNAH8Q96JB1 4490 aa8.72□□□□□ -1.01
HMBOX1-213ENST00000560269 LOC107984156A0A0G2JMH3 177 aa8.71□□□□□ -1.02
HMBOX1-213ENST00000560269 TSTD3H0UI37 97 aa8.71□□□□□ -1.02
HMBOX1-213ENST00000560269 C9orf129Q5T035 196 aaKnown RBP8.71□□□□□ -1.02
HMBOX1-213ENST00000560269 ARL17AQ8IVW1 177 aa8.71□□□□□ -1.02
HMBOX1-213ENST00000560269 KRTAP10-1P60331 282 aa8.7□□□□□ -1.02
HMBOX1-213ENST00000560269 LINC00308Q8TCZ7 52 aa8.7□□□□□ -1.02
HMBOX1-213ENST00000560269 PPDPFQ9H3Y8 114 aa8.7□□□□□ -1.02
HMBOX1-213ENST00000560269 XAGE1AQ9HD64 81 aa8.7□□□□□ -1.02
HMBOX1-213ENST00000560269 LINC00474Q9P2X8 69 aa8.7□□□□□ -1.02
HMBOX1-213ENST00000560269 IGKV2-24A0A0C4DH68 120 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms