RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 PRSS2P07478 247 aa14.66□□□□□ -0.06
CRNDE-209ENST00000560208 NDUFA1O15239 70 aa14.65□□□□□ -0.06
CRNDE-209ENST00000560208 NUPR1O60356 82 aa14.65□□□□□ -0.06
CRNDE-209ENST00000560208 IFI27L1Q96BM0 104 aa14.65□□□□□ -0.06
CRNDE-209ENST00000560208 KIAA0087Q14695 138 aa14.64□□□□□ -0.07
CRNDE-209ENST00000560208 C10orf25Q5T742 122 aa14.64□□□□□ -0.07
CRNDE-209ENST00000560208 UNQ6190/PRO20217Q6UXQ8 127 aa14.64□□□□□ -0.07
CRNDE-209ENST00000560208 A0A096LNI7 61 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST1H2BKO60814 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST1H2BJP06899 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST1H2BOP23527 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST1H2BBP33778 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST1H2BDP58876 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST1H2BCP62807 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST2H2BEQ16778 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.63□□□□□ -0.07
CRNDE-209ENST00000560208 C2orf82Q6UX34 121 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST1H2BHQ93079 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST1H2BNQ99877 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 HIST1H2BMQ99879 126 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 PKIGQ9Y2B9 76 aa14.63□□□□□ -0.07
CRNDE-209ENST00000560208 IGLV5-45A0A087WSX0 123 aa14.62□□□□□ -0.07
CRNDE-209ENST00000560208 SPINK8P0C7L1 97 aa14.62□□□□□ -0.07
CRNDE-209ENST00000560208 IGLC3P0DOY3 106 aa14.62□□□□□ -0.07
CRNDE-209ENST00000560208 SERTAD4-AS1Q5TG53 156 aa14.62□□□□□ -0.07
CRNDE-209ENST00000560208 STPG4Q8N801 248 aa14.62□□□□□ -0.07
CRNDE-209ENST00000560208 C7orf33Q8WU49 177 aa14.62□□□□□ -0.07
CRNDE-209ENST00000560208 LOC107984640A0A0U1RRK4 108 aa14.61□□□□□ -0.07
CRNDE-209ENST00000560208 SMIM1B2RUZ4 78 aa14.61□□□□□ -0.07
CRNDE-209ENST00000560208 F8WDY8 70 aa14.61□□□□□ -0.07
CRNDE-209ENST00000560208 GAGE2BQ13066 116 aa14.61□□□□□ -0.07
CRNDE-209ENST00000560208 C6orf226Q5I0X4 101 aa14.61□□□□□ -0.07
CRNDE-209ENST00000560208 MRPL35Q9NZE8 188 aaKnown RBP14.61□□□□□ -0.07
CRNDE-209ENST00000560208 CHTOPQ9Y3Y2 248 aaKnown RBP14.61□□□□□ -0.07
CRNDE-209ENST00000560208 H0Y8G0 127 aa14.6□□□□□ -0.07
CRNDE-209ENST00000560208 LEPROTL1O95214 131 aa14.6□□□□□ -0.07
CRNDE-209ENST00000560208 RPL18AQ02543 176 aaKnown RBP14.6□□□□□ -0.07
CRNDE-209ENST00000560208 C6orf48Q9UBA6 75 aa14.6□□□□□ -0.07
CRNDE-209ENST00000560208 H3BRM9 83 aa14.59□□□□□ -0.07
CRNDE-209ENST00000560208 FABP4P15090 132 aa14.59□□□□□ -0.07
CRNDE-209ENST00000560208 CKS1BP61024 79 aa14.59□□□□□ -0.07
CRNDE-209ENST00000560208 Q8IZM0 81 aa14.59□□□□□ -0.07
CRNDE-209ENST00000560208 LINC00474Q9P2X8 69 aa14.59□□□□□ -0.07
CRNDE-209ENST00000560208 ZNF22P17026 224 aaPredicted RBP14.58□□□□□ -0.08
CRNDE-209ENST00000560208 RNF151Q2KHN1 245 aa14.58□□□□□ -0.08
CRNDE-209ENST00000560208 C11orf86A6NJI1 115 aa14.57□□□□□ -0.08
CRNDE-209ENST00000560208 TRAV12-1A0A0B4J245 112 aa14.56□□□□□ -0.08
CRNDE-209ENST00000560208 PTTG1IPP53801 180 aa14.56□□□□□ -0.08
CRNDE-209ENST00000560208 TMEM170BQ5T4T1 132 aa14.56□□□□□ -0.08
CRNDE-209ENST00000560208 COX7B2Q8TF08 81 aa14.56□□□□□ -0.08
CRNDE-209ENST00000560208 HSPB8Q9UJY1 196 aa14.55□□□□□ -0.08
CRNDE-209ENST00000560208 TRBV30A0A0K0K1B3 111 aa14.53□□□□□ -0.08
CRNDE-209ENST00000560208 C9orf116Q5BN46 136 aaPredicted RBP14.53□□□□□ -0.08
CRNDE-209ENST00000560208 F8VRH5 84 aa14.52□□□□□ -0.09
CRNDE-209ENST00000560208 MT1HL1P0DM35 61 aa14.52□□□□□ -0.09
CRNDE-209ENST00000560208 KRTAP3-3Q9BYR6 98 aa14.52□□□□□ -0.09
CRNDE-209ENST00000560208 KRTAP3-2Q9BYR7 98 aa14.52□□□□□ -0.09
CRNDE-209ENST00000560208 PRR3P79522 188 aaKnown RBP14.51□□□□□ -0.09
CRNDE-209ENST00000560208 GAGE2EQ4V326 116 aa14.51□□□□□ -0.09
CRNDE-209ENST00000560208 GAGE2DQ9UEU5 116 aa14.51□□□□□ -0.09
CRNDE-209ENST00000560208 CXCL5P42830 114 aa14.5□□□□□ -0.09
CRNDE-209ENST00000560208 Q6ZRP5 223 aa14.5□□□□□ -0.09
CRNDE-209ENST00000560208 HMCN2Q8NDA2 5059 aa14.5□□□□□ -0.09
CRNDE-209ENST00000560208 ODF1Q14990 250 aa14.49□□□□□ -0.09
CRNDE-209ENST00000560208 IGLV5-39A0A0G2JS06 123 aa14.47□□□□□ -0.09
CRNDE-209ENST00000560208 TLX1NBP0CAT3 122 aa14.47□□□□□ -0.09
CRNDE-209ENST00000560208 MAP1LC3CQ9BXW4 147 aa14.46□□□□□ -0.09
CRNDE-209ENST00000560208 PLA2G2DQ9UNK4 145 aa14.46□□□□□ -0.09
CRNDE-209ENST00000560208 NDUFC2-KCTD14E9PQ53 114 aa14.45□□□□□ -0.1
CRNDE-209ENST00000560208 PMCHL2Q9BQD1 86 aa14.45□□□□□ -0.1
CRNDE-209ENST00000560208 A0A1W2PNN7 141 aa14.44□□□□□ -0.1
CRNDE-209ENST00000560208 TMEM223A0PJW6 202 aa14.44□□□□□ -0.1
CRNDE-209ENST00000560208 COA6Q5JTJ3 125 aaKnown RBP14.42□□□□□ -0.1
CRNDE-209ENST00000560208 TNXBP22105 4242 aa14.4□□□□□ -0.1
CRNDE-209ENST00000560208 FAM168BA1KXE4 195 aa14.4□□□□□ -0.1
CRNDE-209ENST00000560208 DPM2O94777 84 aa14.4□□□□□ -0.1
CRNDE-209ENST00000560208 PLNP26678 52 aa14.39□□□□□ -0.11
CRNDE-209ENST00000560208 FAM19A5Q7Z5A7 132 aaPredicted RBP14.39□□□□□ -0.11
CRNDE-209ENST00000560208 C9orf129Q5T035 196 aaKnown RBP14.38□□□□□ -0.11
CRNDE-209ENST00000560208 SPINK6Q6UWN8 80 aa14.38□□□□□ -0.11
CRNDE-209ENST00000560208 ZNF625Q96I27 306 aaPredicted RBP14.38□□□□□ -0.11
CRNDE-209ENST00000560208 XAGE1AQ9HD64 81 aa14.38□□□□□ -0.11
CRNDE-209ENST00000560208 SYS1-DBNDD2H3BUS1 97 aa14.37□□□□□ -0.11
CRNDE-209ENST00000560208 IGKCP01834 107 aa14.37□□□□□ -0.11
CRNDE-209ENST00000560208 LINC01600Q96MT4 127 aa14.37□□□□□ -0.11
CRNDE-209ENST00000560208 PFN2P35080 140 aa14.36□□□□□ -0.11
CRNDE-209ENST00000560208 SRSF9Q13242 221 aaKnown RBP eCLIP14.35□□□□□ -0.11
CRNDE-209ENST00000560208 PHF5AQ7RTV0 110 aaKnown RBP14.35□□□□□ -0.11
CRNDE-209ENST00000560208 KRTDAPP60985 99 aa14.33□□□□□ -0.12
CRNDE-209ENST00000560208 HERVK_113P61574 105 aa14.32□□□□□ -0.12
CRNDE-209ENST00000560208 REG3GQ6UW15 175 aa14.32□□□□□ -0.12
CRNDE-209ENST00000560208 ERG28Q9UKR5 140 aa14.32□□□□□ -0.12
CRNDE-209ENST00000560208 C3orf79P0CE67 100 aa14.31□□□□□ -0.12
CRNDE-209ENST00000560208 PET117Q6UWS5 81 aa14.31□□□□□ -0.12
CRNDE-209ENST00000560208 SFTA2Q6UW10 78 aa14.3□□□□□ -0.12
CRNDE-209ENST00000560208 KRTAP7-1Q8IUC3 87 aa14.3□□□□□ -0.12
CRNDE-209ENST00000560208 PSORS1C2Q9UIG4 136 aa14.3□□□□□ -0.12
CRNDE-209ENST00000560208 M0QXV9 152 aa14.29□□□□□ -0.12
CRNDE-209ENST00000560208 A0A0U1RRA0 63 aa14.28□□□□□ -0.12
CRNDE-209ENST00000560208 LEPROTO15243 131 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms