RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 HSPB8Q9UJY1 196 aa6.94□□□□□ -1.3
TPM1-217ENST00000559108 TMEM223A0PJW6 202 aa6.93□□□□□ -1.3
TPM1-217ENST00000559108 SYS1-DBNDD2H3BUS1 97 aa6.93□□□□□ -1.3
TPM1-217ENST00000559108 C3orf79P0CE67 100 aa6.93□□□□□ -1.3
TPM1-217ENST00000559108 CIRBPQ14011 172 aaKnown RBP6.93□□□□□ -1.3
TPM1-217ENST00000559108 Q8IZM0 81 aa6.93□□□□□ -1.3
TPM1-217ENST00000559108 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
TPM1-217ENST00000559108 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.92□□□□□ -1.3
TPM1-217ENST00000559108 TSPEAR-AS2P59090 65 aa6.92□□□□□ -1.3
TPM1-217ENST00000559108 TMEM170BQ5T4T1 132 aa6.92□□□□□ -1.3
TPM1-217ENST00000559108 CIRBP-AS1Q8TBR5 109 aa6.92□□□□□ -1.3
TPM1-217ENST00000559108 SPACA4Q8TDM5 124 aa6.92□□□□□ -1.3
TPM1-217ENST00000559108 COX7B2Q8TF08 81 aa6.92□□□□□ -1.3
TPM1-217ENST00000559108 PACRGQ96M98 296 aaPredicted RBP6.92□□□□□ -1.3
TPM1-217ENST00000559108 HIST1H2BLQ99880 126 aa6.92□□□□□ -1.3
TPM1-217ENST00000559108 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
TPM1-217ENST00000559108 NDUFA1O15239 70 aa6.91□□□□□ -1.3
TPM1-217ENST00000559108 LINC01545Q5VT33 79 aa6.91□□□□□ -1.3
TPM1-217ENST00000559108 MAP1LC3CQ9BXW4 147 aa6.91□□□□□ -1.3
TPM1-217ENST00000559108 FAT1Q14517 4588 aa6.9□□□□□ -1.3
TPM1-217ENST00000559108 C5orf52A6NGY3 159 aa6.9□□□□□ -1.3
TPM1-217ENST00000559108 SMR3BP02814 79 aaPredicted RBP6.9□□□□□ -1.3
TPM1-217ENST00000559108 SNRPEP62304 92 aaKnown RBP6.9□□□□□ -1.3
TPM1-217ENST00000559108 Q6ZRP5 223 aa6.9□□□□□ -1.3
TPM1-217ENST00000559108 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.3
TPM1-217ENST00000559108 H3BRM9 83 aa6.89□□□□□ -1.31
TPM1-217ENST00000559108 DPM2O94777 84 aa6.89□□□□□ -1.31
TPM1-217ENST00000559108 KRTDAPP60985 99 aa6.89□□□□□ -1.31
TPM1-217ENST00000559108 RNF151Q2KHN1 245 aa6.89□□□□□ -1.31
TPM1-217ENST00000559108 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
TPM1-217ENST00000559108 A0A087WYN8 130 aa6.88□□□□□ -1.31
TPM1-217ENST00000559108 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
TPM1-217ENST00000559108 IGKCP01834 107 aa6.88□□□□□ -1.31
TPM1-217ENST00000559108 PRSS2P07478 247 aa6.88□□□□□ -1.31
TPM1-217ENST00000559108 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
TPM1-217ENST00000559108 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
TPM1-217ENST00000559108 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
TPM1-217ENST00000559108 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
TPM1-217ENST00000559108 LOC107984640A0A0U1RRK4 108 aa6.87□□□□□ -1.31
TPM1-217ENST00000559108 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
TPM1-217ENST00000559108 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
TPM1-217ENST00000559108 F8WDY8 70 aa6.87□□□□□ -1.31
TPM1-217ENST00000559108 CKS1BP61024 79 aa6.87□□□□□ -1.31
TPM1-217ENST00000559108 RPL18AQ02543 176 aaKnown RBP6.87□□□□□ -1.31
TPM1-217ENST00000559108 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
TPM1-217ENST00000559108 PET117Q6UWS5 81 aa6.87□□□□□ -1.31
TPM1-217ENST00000559108 PLNP26678 52 aa6.86□□□□□ -1.31
TPM1-217ENST00000559108 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
TPM1-217ENST00000559108 MAJINQ3KP22 176 aa6.86□□□□□ -1.31
TPM1-217ENST00000559108 STPG4Q8N801 248 aa6.86□□□□□ -1.31
TPM1-217ENST00000559108 IGKV2D-26A0A0A0MRZ7 120 aa6.85□□□□□ -1.31
TPM1-217ENST00000559108 EPM2AB3EWF7 344 aa6.85□□□□□ -1.31
TPM1-217ENST00000559108 GAGE2EQ4V326 116 aa6.85□□□□□ -1.31
TPM1-217ENST00000559108 ATOH7Q8N100 152 aa6.85□□□□□ -1.31
TPM1-217ENST00000559108 PLAC8Q9NZF1 115 aa6.85□□□□□ -1.31
TPM1-217ENST00000559108 GAGE2DQ9UEU5 116 aa6.85□□□□□ -1.31
TPM1-217ENST00000559108 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
TPM1-217ENST00000559108 S100A6P06703 90 aa6.84□□□□□ -1.31
TPM1-217ENST00000559108 CXCL5P42830 114 aa6.84□□□□□ -1.31
TPM1-217ENST00000559108 Q8N1X5 172 aa6.84□□□□□ -1.31
TPM1-217ENST00000559108 XAGE1AQ9HD64 81 aa6.84□□□□□ -1.31
TPM1-217ENST00000559108 TMA7Q9Y2S6 64 aaKnown RBP6.84□□□□□ -1.31
TPM1-217ENST00000559108 LEPROTO15243 131 aa6.83□□□□□ -1.32
TPM1-217ENST00000559108 ANKRD39Q53RE8 183 aa6.83□□□□□ -1.32
TPM1-217ENST00000559108 KRTAP11-1Q8IUC1 163 aa6.83□□□□□ -1.32
TPM1-217ENST00000559108 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
TPM1-217ENST00000559108 Q8NDZ9 215 aa6.83□□□□□ -1.32
TPM1-217ENST00000559108 TTTY13Q9BZ97 58 aa6.83□□□□□ -1.32
TPM1-217ENST00000559108 E9PLD3 99 aa6.82□□□□□ -1.32
TPM1-217ENST00000559108 S100A2P29034 98 aa6.82□□□□□ -1.32
TPM1-217ENST00000559108 PFN2P35080 140 aa6.82□□□□□ -1.32
TPM1-217ENST00000559108 SERTAD4-AS1Q5TG53 156 aa6.82□□□□□ -1.32
TPM1-217ENST00000559108 ERG28Q9UKR5 140 aa6.82□□□□□ -1.32
TPM1-217ENST00000559108 ABCA13Q86UQ4 5058 aa6.82□□□□□ -1.32
TPM1-217ENST00000559108 A0A0U1RRA0 63 aa6.81□□□□□ -1.32
TPM1-217ENST00000559108 J3QQQ9 107 aa6.81□□□□□ -1.32
TPM1-217ENST00000559108 Q5VSD8 79 aa6.81□□□□□ -1.32
TPM1-217ENST00000559108 NDUFA12Q9UI09 145 aa6.81□□□□□ -1.32
TPM1-217ENST00000559108 VPS13BQ7Z7G8 4022 aa6.8□□□□□ -1.32
TPM1-217ENST00000559108 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
TPM1-217ENST00000559108 FAM19A5Q7Z5A7 132 aaPredicted RBP6.8□□□□□ -1.32
TPM1-217ENST00000559108 SMIM13P0DJ93 91 aa6.79□□□□□ -1.32
TPM1-217ENST00000559108 HNRNPA3P51991 378 aaKnown RBP6.79□□□□□ -1.32
TPM1-217ENST00000559108 PLEKHB2Q96CS7 222 aa6.79□□□□□ -1.32
TPM1-217ENST00000559108 SND1-IT1Q9HBX3 110 aa6.79□□□□□ -1.32
TPM1-217ENST00000559108 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
TPM1-217ENST00000559108 EIF4EBP3O60516 100 aaPredicted RBP6.78□□□□□ -1.32
TPM1-217ENST00000559108 HERVK_113P61574 105 aa6.78□□□□□ -1.32
TPM1-217ENST00000559108 DPH3Q96FX2 82 aa6.78□□□□□ -1.32
TPM1-217ENST00000559108 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
TPM1-217ENST00000559108 PKIGQ9Y2B9 76 aa6.78□□□□□ -1.32
TPM1-217ENST00000559108 C20orf202A1L168 122 aa6.77□□□□□ -1.33
TPM1-217ENST00000559108 ADAMTSL4-AS1Q5T5F5 129 aa6.77□□□□□ -1.33
TPM1-217ENST00000559108 PCP2Q8IVA1 136 aa6.77□□□□□ -1.33
TPM1-217ENST00000559108 DAND5Q8N907 189 aa6.77□□□□□ -1.33
TPM1-217ENST00000559108 SRRM2Q9UQ35 2752 aaKnown RBP6.77□□□□□ -1.33
TPM1-217ENST00000559108 A0A0J9YXY3 114 aa6.76□□□□□ -1.33
TPM1-217ENST00000559108 LGALS3P17931 250 aaKnown RBP6.76□□□□□ -1.33
TPM1-217ENST00000559108 LITAFQ99732 161 aa6.76□□□□□ -1.33
TPM1-217ENST00000559108 MYMXA0A1B0GTQ4 84 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms