RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 A0A1B0GVY2 172 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 HSBP1L1C9JCN9 74 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 F8WDY8 70 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 LEPROTO15243 131 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 KRTAP10-2P60368 255 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 KIAA0087Q14695 138 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 C2orf82Q6UX34 121 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 PLEKHB2Q96CS7 222 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 PKIGQ9Y2B9 76 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
CHRNA3-204ENST00000559002 E9PLD3 99 aa4.29□□□□□ -1.72
CHRNA3-204ENST00000559002 LGALS3P17931 250 aaKnown RBP4.29□□□□□ -1.72
CHRNA3-204ENST00000559002 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHRNA3-204ENST00000559002 SFTA2Q6UW10 78 aa4.29□□□□□ -1.72
CHRNA3-204ENST00000559002 UNQ6190/PRO20217Q6UXQ8 127 aa4.29□□□□□ -1.72
CHRNA3-204ENST00000559002 Q6ZRU5 148 aa4.29□□□□□ -1.72
CHRNA3-204ENST00000559002 STPG4Q8N801 248 aa4.29□□□□□ -1.72
CHRNA3-204ENST00000559002 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
CHRNA3-204ENST00000559002 TRBV30A0A0K0K1B3 111 aa4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 C16orf90A8MZG2 172 aa4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 J3QQQ9 107 aa4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 SLPIP03973 132 aa4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 GCSHP23434 173 aa4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 JOSD1Q15040 202 aaPredicted RBP4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 RNF151Q2KHN1 245 aa4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 C10orf25Q5T742 122 aa4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 C9orf163Q8N9P6 203 aa4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 NDUFA12Q9UI09 145 aa4.28□□□□□ -1.72
CHRNA3-204ENST00000559002 LOC107984640A0A0U1RRK4 108 aa4.27□□□□□ -1.73
CHRNA3-204ENST00000559002 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
CHRNA3-204ENST00000559002 LCE2BO14633 110 aa4.27□□□□□ -1.73
CHRNA3-204ENST00000559002 NMUP48645 174 aa4.27□□□□□ -1.73
CHRNA3-204ENST00000559002 TSPEAR-AS2P59090 65 aa4.27□□□□□ -1.73
CHRNA3-204ENST00000559002 RPL18AQ02543 176 aaKnown RBP4.27□□□□□ -1.73
CHRNA3-204ENST00000559002 LINC01620Q4KN68 170 aa4.27□□□□□ -1.73
CHRNA3-204ENST00000559002 ANKRD39Q53RE8 183 aa4.27□□□□□ -1.73
CHRNA3-204ENST00000559002 C6orf48Q9UBA6 75 aa4.27□□□□□ -1.73
CHRNA3-204ENST00000559002 LOC105371267A0A1B0GV96 52 aa4.26□□□□□ -1.73
CHRNA3-204ENST00000559002 HERV-K104P63124 156 aa4.26□□□□□ -1.73
CHRNA3-204ENST00000559002 MAJINQ3KP22 176 aa4.26□□□□□ -1.73
CHRNA3-204ENST00000559002 C9orf116Q5BN46 136 aaPredicted RBP4.26□□□□□ -1.73
CHRNA3-204ENST00000559002 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
CHRNA3-204ENST00000559002 ZNF625Q96I27 306 aaPredicted RBP4.26□□□□□ -1.73
CHRNA3-204ENST00000559002 VAMP8Q9BV40 100 aa4.26□□□□□ -1.73
CHRNA3-204ENST00000559002 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
CHRNA3-204ENST00000559002 IGKV2D-26A0A0A0MRZ7 120 aa4.25□□□□□ -1.73
CHRNA3-204ENST00000559002 IGKV2-24A0A0C4DH68 120 aa4.25□□□□□ -1.73
CHRNA3-204ENST00000559002 ZNF815PA8K554 130 aa4.25□□□□□ -1.73
CHRNA3-204ENST00000559002 LINC00587B1AMM8 73 aa4.25□□□□□ -1.73
CHRNA3-204ENST00000559002 NDUFC2-KCTD14E9PQ53 114 aa4.25□□□□□ -1.73
CHRNA3-204ENST00000559002 PFN2P35080 140 aa4.25□□□□□ -1.73
CHRNA3-204ENST00000559002 GAGE2BQ13066 116 aa4.25□□□□□ -1.73
CHRNA3-204ENST00000559002 PYY3Q5JQD4 70 aa4.25□□□□□ -1.73
CHRNA3-204ENST00000559002 ERG28Q9UKR5 140 aa4.25□□□□□ -1.73
CHRNA3-204ENST00000559002 A0A096LNI7 61 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 A0A0U1RRA0 63 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 TLX1NBP0CAT3 122 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 LINC00158P58513 81 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 KRTAP10-1P60331 282 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 S100A12P80511 92 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 COX17Q14061 63 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 GAGE2EQ4V326 116 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 SPATA45Q537H7 98 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 SCGB1D4Q6XE38 83 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 SDIM1Q6ZPB5 146 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 DPH3Q96FX2 82 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 LINC00474Q9P2X8 69 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 GAGE2DQ9UEU5 116 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 PAM16Q9Y3D7 125 aa4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 APOBP04114 4563 aaKnown RBP4.24□□□□□ -1.73
CHRNA3-204ENST00000559002 A0A0J9YXY3 114 aa4.23□□□□□ -1.73
CHRNA3-204ENST00000559002 SMIM13P0DJ93 91 aa4.23□□□□□ -1.73
CHRNA3-204ENST00000559002 PTTG1IPP53801 180 aa4.23□□□□□ -1.73
CHRNA3-204ENST00000559002 CIRBPQ14011 172 aaKnown RBP4.23□□□□□ -1.73
CHRNA3-204ENST00000559002 Q6ZRP5 223 aa4.23□□□□□ -1.73
CHRNA3-204ENST00000559002 PCP2Q8IVA1 136 aa4.23□□□□□ -1.73
CHRNA3-204ENST00000559002 TTTY13Q9BZ97 58 aa4.23□□□□□ -1.73
CHRNA3-204ENST00000559002 CHTF8P0CG12 524 aa4.22□□□□□ -1.73
CHRNA3-204ENST00000559002 SMIM6P0DI80 62 aa4.22□□□□□ -1.73
CHRNA3-204ENST00000559002 XAGE1AQ9HD64 81 aa4.22□□□□□ -1.73
CHRNA3-204ENST00000559002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.22□□□□□ -1.73
CHRNA3-204ENST00000559002 TMEM238C9JI98 176 aa4.21□□□□□ -1.74
CHRNA3-204ENST00000559002 COX8AP10176 69 aa4.21□□□□□ -1.74
CHRNA3-204ENST00000559002 SLC25A34Q6PIV7 304 aa4.21□□□□□ -1.74
CHRNA3-204ENST00000559002 MIR7-3HGQ8N6C7 128 aa4.21□□□□□ -1.74
CHRNA3-204ENST00000559002 SPACA4Q8TDM5 124 aa4.21□□□□□ -1.74
CHRNA3-204ENST00000559002 MIEN1Q9BRT3 115 aa4.21□□□□□ -1.74
CHRNA3-204ENST00000559002 TP73-AS1Q9UF72 201 aa4.21□□□□□ -1.74
CHRNA3-204ENST00000559002 PANO1I0J062 215 aa4.2□□□□□ -1.74
CHRNA3-204ENST00000559002 TIMM17BO60830 172 aa4.2□□□□□ -1.74
CHRNA3-204ENST00000559002 C9orf129Q5T035 196 aaKnown RBP4.2□□□□□ -1.74
CHRNA3-204ENST00000559002 Q6ZSA8 131 aa4.2□□□□□ -1.74
CHRNA3-204ENST00000559002 BOD1L2Q8IYS8 172 aa4.2□□□□□ -1.74
CHRNA3-204ENST00000559002 DAND5Q8N907 189 aa4.2□□□□□ -1.74
CHRNA3-204ENST00000559002 C14orf144Q96I85 54 aa4.2□□□□□ -1.74
CHRNA3-204ENST00000559002 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
CHRNA3-204ENST00000559002 FAM30AQ9NZY2 134 aa4.2□□□□□ -1.74
CHRNA3-204ENST00000559002 BIRC6Q9NR09 4857 aa4.19□□□□□ -1.74
CHRNA3-204ENST00000559002 A0A087WYN8 130 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms