RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TRAV12-1A0A0B4J245 112 aa9.89□□□□□ -0.83
LINC01220-201ENST00000558575 LEPROTL1O95214 131 aa9.89□□□□□ -0.83
LINC01220-201ENST00000558575 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
LINC01220-201ENST00000558575 CAMK2N2Q96S95 79 aa9.89□□□□□ -0.83
LINC01220-201ENST00000558575 C11orf86A6NJI1 115 aa9.88□□□□□ -0.83
LINC01220-201ENST00000558575 SMIM1B2RUZ4 78 aa9.88□□□□□ -0.83
LINC01220-201ENST00000558575 FABP4P15090 132 aa9.88□□□□□ -0.83
LINC01220-201ENST00000558575 ZNF22P17026 224 aaPredicted RBP9.88□□□□□ -0.83
LINC01220-201ENST00000558575 C2orf82Q6UX34 121 aa9.88□□□□□ -0.83
LINC01220-201ENST00000558575 CHAC1Q9BUX1 264 aa9.88□□□□□ -0.83
LINC01220-201ENST00000558575 CHTOPQ9Y3Y2 248 aaKnown RBP9.88□□□□□ -0.83
LINC01220-201ENST00000558575 F8WDY8 70 aa9.87□□□□□ -0.83
LINC01220-201ENST00000558575 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
LINC01220-201ENST00000558575 CHTF8P0CG12 524 aa9.87□□□□□ -0.83
LINC01220-201ENST00000558575 CIRBPQ14011 172 aaKnown RBP9.87□□□□□ -0.83
LINC01220-201ENST00000558575 SCXQ7RTU7 201 aa9.87□□□□□ -0.83
LINC01220-201ENST00000558575 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
LINC01220-201ENST00000558575 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
LINC01220-201ENST00000558575 C6orf48Q9UBA6 75 aa9.86□□□□□ -0.83
LINC01220-201ENST00000558575 ODF1Q14990 250 aa9.85□□□□□ -0.83
LINC01220-201ENST00000558575 RNF151Q2KHN1 245 aa9.85□□□□□ -0.83
LINC01220-201ENST00000558575 PACRGQ96M98 296 aaPredicted RBP9.85□□□□□ -0.83
LINC01220-201ENST00000558575 TOMM7Q9P0U1 55 aa9.85□□□□□ -0.83
LINC01220-201ENST00000558575 A0A096LNI7 61 aa9.84□□□□□ -0.83
LINC01220-201ENST00000558575 IGLV5-39A0A0G2JS06 123 aa9.84□□□□□ -0.83
LINC01220-201ENST00000558575 NDUFA1O15239 70 aa9.84□□□□□ -0.83
LINC01220-201ENST00000558575 PLA2G1BP04054 148 aaKnown RBP9.84□□□□□ -0.83
LINC01220-201ENST00000558575 Q8IZM0 81 aa9.84□□□□□ -0.83
LINC01220-201ENST00000558575 HSPB8Q9UJY1 196 aa9.84□□□□□ -0.83
LINC01220-201ENST00000558575 F8VRH5 84 aa9.83□□□□□ -0.84
LINC01220-201ENST00000558575 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
LINC01220-201ENST00000558575 SPACA4Q8TDM5 124 aa9.83□□□□□ -0.84
LINC01220-201ENST00000558575 LRP2P98164 4655 aa9.82□□□□□ -0.84
LINC01220-201ENST00000558575 H0Y8G0 127 aa9.82□□□□□ -0.84
LINC01220-201ENST00000558575 H3BRM9 83 aa9.82□□□□□ -0.84
LINC01220-201ENST00000558575 PRSS2P07478 247 aa9.82□□□□□ -0.84
LINC01220-201ENST00000558575 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
LINC01220-201ENST00000558575 COX7B2Q8TF08 81 aa9.82□□□□□ -0.84
LINC01220-201ENST00000558575 IGKV2-24A0A0C4DH68 120 aa9.81□□□□□ -0.84
LINC01220-201ENST00000558575 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
LINC01220-201ENST00000558575 C9orf116Q5BN46 136 aaPredicted RBP9.81□□□□□ -0.84
LINC01220-201ENST00000558575 TMEM170BQ5T4T1 132 aa9.81□□□□□ -0.84
LINC01220-201ENST00000558575 A0A087WYN8 130 aa9.8□□□□□ -0.84
LINC01220-201ENST00000558575 OXTP01178 125 aa9.8□□□□□ -0.84
LINC01220-201ENST00000558575 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
LINC01220-201ENST00000558575 PMCHL2Q9BQD1 86 aa9.8□□□□□ -0.84
LINC01220-201ENST00000558575 TRBV30A0A0K0K1B3 111 aa9.79□□□□□ -0.84
LINC01220-201ENST00000558575 TMEM223A0PJW6 202 aa9.79□□□□□ -0.84
LINC01220-201ENST00000558575 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
LINC01220-201ENST00000558575 CKS1BP61024 79 aa9.79□□□□□ -0.84
LINC01220-201ENST00000558575 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
LINC01220-201ENST00000558575 MAJINQ3KP22 176 aa9.79□□□□□ -0.84
LINC01220-201ENST00000558575 MAP1LC3CQ9BXW4 147 aa9.79□□□□□ -0.84
LINC01220-201ENST00000558575 SYS1-DBNDD2H3BUS1 97 aa9.78□□□□□ -0.84
LINC01220-201ENST00000558575 KRTAP10-4P60372 401 aaPredicted RBP9.78□□□□□ -0.84
LINC01220-201ENST00000558575 Q6ZRP5 223 aa9.78□□□□□ -0.84
LINC01220-201ENST00000558575 DPH3Q96FX2 82 aa9.78□□□□□ -0.84
LINC01220-201ENST00000558575 PLAC8Q9NZF1 115 aa9.78□□□□□ -0.84
LINC01220-201ENST00000558575 A0A1W2PNN7 141 aa9.76□□□□□ -0.85
LINC01220-201ENST00000558575 CXCL5P42830 114 aa9.76□□□□□ -0.85
LINC01220-201ENST00000558575 DPM2O94777 84 aa9.75□□□□□ -0.85
LINC01220-201ENST00000558575 C3orf79P0CE67 100 aa9.75□□□□□ -0.85
LINC01220-201ENST00000558575 RPL18AQ02543 176 aaKnown RBP9.75□□□□□ -0.85
LINC01220-201ENST00000558575 STPG4Q8N801 248 aa9.75□□□□□ -0.85
LINC01220-201ENST00000558575 PKIGQ9Y2B9 76 aa9.75□□□□□ -0.85
LINC01220-201ENST00000558575 PKHD1L1Q86WI1 4243 aa9.75□□□□□ -0.85
LINC01220-201ENST00000558575 NDUFC2-KCTD14E9PQ53 114 aa9.74□□□□□ -0.85
LINC01220-201ENST00000558575 GAGE2EQ4V326 116 aa9.74□□□□□ -0.85
LINC01220-201ENST00000558575 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
LINC01220-201ENST00000558575 LINC00474Q9P2X8 69 aa9.74□□□□□ -0.85
LINC01220-201ENST00000558575 GAGE2DQ9UEU5 116 aa9.74□□□□□ -0.85
LINC01220-201ENST00000558575 IGKCP01834 107 aa9.73□□□□□ -0.85
LINC01220-201ENST00000558575 PLNP26678 52 aa9.73□□□□□ -0.85
LINC01220-201ENST00000558575 LINC01545Q5VT33 79 aa9.73□□□□□ -0.85
LINC01220-201ENST00000558575 PET117Q6UWS5 81 aa9.73□□□□□ -0.85
LINC01220-201ENST00000558575 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
LINC01220-201ENST00000558575 C9orf129Q5T035 196 aaKnown RBP9.72□□□□□ -0.85
LINC01220-201ENST00000558575 ZNF625Q96I27 306 aaPredicted RBP9.72□□□□□ -0.85
LINC01220-201ENST00000558575 FAM168BA1KXE4 195 aa9.71□□□□□ -0.86
LINC01220-201ENST00000558575 TSPEAR-AS2P59090 65 aa9.7□□□□□ -0.86
LINC01220-201ENST00000558575 KRTDAPP60985 99 aa9.7□□□□□ -0.86
LINC01220-201ENST00000558575 HIST1H2BLQ99880 126 aa9.7□□□□□ -0.86
LINC01220-201ENST00000558575 SNRPEP62304 92 aaKnown RBP9.69□□□□□ -0.86
LINC01220-201ENST00000558575 LEPROTO15243 131 aa9.68□□□□□ -0.86
LINC01220-201ENST00000558575 XAGE1AQ9HD64 81 aa9.68□□□□□ -0.86
LINC01220-201ENST00000558575 C5orf52A6NGY3 159 aa9.67□□□□□ -0.86
LINC01220-201ENST00000558575 S100A6P06703 90 aa9.67□□□□□ -0.86
LINC01220-201ENST00000558575 ERG28Q9UKR5 140 aa9.67□□□□□ -0.86
LINC01220-201ENST00000558575 MT1HL1P0DM35 61 aa9.66□□□□□ -0.86
LINC01220-201ENST00000558575 PFN2P35080 140 aa9.65□□□□□ -0.86
LINC01220-201ENST00000558575 PHF5AQ7RTV0 110 aaKnown RBP9.65□□□□□ -0.86
LINC01220-201ENST00000558575 PLEKHB2Q96CS7 222 aa9.65□□□□□ -0.86
LINC01220-201ENST00000558575 NDUFA12Q9UI09 145 aa9.65□□□□□ -0.86
LINC01220-201ENST00000558575 TNXBP22105 4242 aa9.64□□□□□ -0.87
LINC01220-201ENST00000558575 E9PLD3 99 aa9.64□□□□□ -0.87
LINC01220-201ENST00000558575 J3QQQ9 107 aa9.64□□□□□ -0.87
LINC01220-201ENST00000558575 S100A2P29034 98 aa9.64□□□□□ -0.87
LINC01220-201ENST00000558575 HERVK_113P61574 105 aa9.63□□□□□ -0.87
LINC01220-201ENST00000558575 COX17Q14061 63 aa9.63□□□□□ -0.87
LINC01220-201ENST00000558575 SFTA2Q6UW10 78 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms