RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PANO1I0J062 215 aa16.34■□□□□ 0.21
SMAD6-202ENST00000557916 CKS1BP61024 79 aa16.33■□□□□ 0.2
SMAD6-202ENST00000557916 TMEM170BQ5T4T1 132 aa16.33■□□□□ 0.2
SMAD6-202ENST00000557916 SCXQ7RTU7 201 aa16.33■□□□□ 0.2
SMAD6-202ENST00000557916 CHTF8P0CG12 524 aa16.32■□□□□ 0.2
SMAD6-202ENST00000557916 ODF1Q14990 250 aa16.32■□□□□ 0.2
SMAD6-202ENST00000557916 LOC107984640A0A0U1RRK4 108 aa16.31■□□□□ 0.2
SMAD6-202ENST00000557916 COX7B2Q8TF08 81 aa16.31■□□□□ 0.2
SMAD6-202ENST00000557916 C6orf48Q9UBA6 75 aa16.31■□□□□ 0.2
SMAD6-202ENST00000557916 IGKV2-24A0A0C4DH68 120 aa16.3■□□□□ 0.2
SMAD6-202ENST00000557916 CIRBPQ14011 172 aaKnown RBP16.3■□□□□ 0.2
SMAD6-202ENST00000557916 CIRBP-AS1Q8TBR5 109 aa16.3■□□□□ 0.2
SMAD6-202ENST00000557916 DPH3Q96FX2 82 aa16.3■□□□□ 0.2
SMAD6-202ENST00000557916 MAP1LC3CQ9BXW4 147 aa16.3■□□□□ 0.2
SMAD6-202ENST00000557916 A0A096LNI7 61 aa16.29■□□□□ 0.2
SMAD6-202ENST00000557916 TRBV30A0A0K0K1B3 111 aa16.29■□□□□ 0.2
SMAD6-202ENST00000557916 SPACA4Q8TDM5 124 aa16.28■□□□□ 0.2
SMAD6-202ENST00000557916 IGLV5-39A0A0G2JS06 123 aa16.28■□□□□ 0.2
SMAD6-202ENST00000557916 SMR3BP02814 79 aaPredicted RBP16.27■□□□□ 0.19
SMAD6-202ENST00000557916 CXCL5P42830 114 aa16.27■□□□□ 0.19
SMAD6-202ENST00000557916 GAGE2BQ13066 116 aa16.27■□□□□ 0.19
SMAD6-202ENST00000557916 MAJINQ3KP22 176 aa16.27■□□□□ 0.19
SMAD6-202ENST00000557916 RPL18AQ02543 176 aaKnown RBP16.26■□□□□ 0.19
SMAD6-202ENST00000557916 LINC00474Q9P2X8 69 aa16.26■□□□□ 0.19
SMAD6-202ENST00000557916 PTTG1IPP53801 180 aa16.25■□□□□ 0.19
SMAD6-202ENST00000557916 KRTAP17-1Q9BYP8 105 aa16.25■□□□□ 0.19
SMAD6-202ENST00000557916 Q8N1X5 172 aa16.24■□□□□ 0.19
SMAD6-202ENST00000557916 A0A087WYN8 130 aa16.23■□□□□ 0.19
SMAD6-202ENST00000557916 TMEM223A0PJW6 202 aa16.23■□□□□ 0.19
SMAD6-202ENST00000557916 TLX1NBP0CAT3 122 aa16.23■□□□□ 0.19
SMAD6-202ENST00000557916 C9orf116Q5BN46 136 aaPredicted RBP16.23■□□□□ 0.19
SMAD6-202ENST00000557916 PMCHL2Q9BQD1 86 aa16.23■□□□□ 0.19
SMAD6-202ENST00000557916 SYS1-DBNDD2H3BUS1 97 aa16.22■□□□□ 0.19
SMAD6-202ENST00000557916 PLNP26678 52 aa16.22■□□□□ 0.19
SMAD6-202ENST00000557916 DPM2O94777 84 aa16.21■□□□□ 0.19
SMAD6-202ENST00000557916 Q6ZRP5 223 aa16.19■□□□□ 0.18
SMAD6-202ENST00000557916 STPG4Q8N801 248 aa16.19■□□□□ 0.18
SMAD6-202ENST00000557916 NDUFC2-KCTD14E9PQ53 114 aa16.19■□□□□ 0.18
SMAD6-202ENST00000557916 PLAC8Q9NZF1 115 aa16.19■□□□□ 0.18
SMAD6-202ENST00000557916 IGKCP01834 107 aa16.18■□□□□ 0.18
SMAD6-202ENST00000557916 FAT1Q14517 4588 aa16.17■□□□□ 0.18
SMAD6-202ENST00000557916 S100A6P06703 90 aa16.17■□□□□ 0.18
SMAD6-202ENST00000557916 GAGE2EQ4V326 116 aa16.17■□□□□ 0.18
SMAD6-202ENST00000557916 PET117Q6UWS5 81 aa16.17■□□□□ 0.18
SMAD6-202ENST00000557916 GAGE2DQ9UEU5 116 aa16.17■□□□□ 0.18
SMAD6-202ENST00000557916 C3orf79P0CE67 100 aa16.16■□□□□ 0.18
SMAD6-202ENST00000557916 FAM229AH3BQW9 127 aa16.15■□□□□ 0.18
SMAD6-202ENST00000557916 LINC00528Q8N1L1 170 aa16.15■□□□□ 0.18
SMAD6-202ENST00000557916 KRTDAPP60985 99 aa16.14■□□□□ 0.17
SMAD6-202ENST00000557916 HIST3H2BBQ8N257 126 aa16.14■□□□□ 0.17
SMAD6-202ENST00000557916 EPM2AB3EWF7 344 aa16.13■□□□□ 0.17
SMAD6-202ENST00000557916 Q5VSD8 79 aa16.13■□□□□ 0.17
SMAD6-202ENST00000557916 LINC01545Q5VT33 79 aa16.13■□□□□ 0.17
SMAD6-202ENST00000557916 S100A2P29034 98 aa16.11■□□□□ 0.17
SMAD6-202ENST00000557916 SFTA2Q6UW10 78 aa16.11■□□□□ 0.17
SMAD6-202ENST00000557916 HERVK_113P61574 105 aa16.11■□□□□ 0.17
SMAD6-202ENST00000557916 KRTAP4-5Q9BYR2 181 aa16.11■□□□□ 0.17
SMAD6-202ENST00000557916 A0A1W2PNN7 141 aa16.1■□□□□ 0.17
SMAD6-202ENST00000557916 ZNF625Q96I27 306 aaPredicted RBP16.1■□□□□ 0.17
SMAD6-202ENST00000557916 SNRPEP62304 92 aaKnown RBP16.08■□□□□ 0.16
SMAD6-202ENST00000557916 HIST1H2BLQ99880 126 aa16.08■□□□□ 0.16
SMAD6-202ENST00000557916 LEPROTO15243 131 aa16.07■□□□□ 0.16
SMAD6-202ENST00000557916 C9orf129Q5T035 196 aaKnown RBP16.06■□□□□ 0.16
SMAD6-202ENST00000557916 PLEKHB2Q96CS7 222 aa16.06■□□□□ 0.16
SMAD6-202ENST00000557916 PFN2P35080 140 aa16.05■□□□□ 0.16
SMAD6-202ENST00000557916 XAGE1AQ9HD64 81 aa16.05■□□□□ 0.16
SMAD6-202ENST00000557916 ERG28Q9UKR5 140 aa16.05■□□□□ 0.16
SMAD6-202ENST00000557916 FAM168BA1KXE4 195 aa16.04■□□□□ 0.16
SMAD6-202ENST00000557916 C20orf202A1L168 122 aa16.04■□□□□ 0.16
SMAD6-202ENST00000557916 PLA2G1BP04054 148 aaKnown RBP16.04■□□□□ 0.16
SMAD6-202ENST00000557916 NDUFA12Q9UI09 145 aa16.03■□□□□ 0.16
SMAD6-202ENST00000557916 VPS13BQ7Z7G8 4022 aa16.03■□□□□ 0.16
SMAD6-202ENST00000557916 ABCA13Q86UQ4 5058 aa16.03■□□□□ 0.16
SMAD6-202ENST00000557916 TSPEAR-AS2P59090 65 aa16.02■□□□□ 0.16
SMAD6-202ENST00000557916 C7orf33Q8WU49 177 aa16.02■□□□□ 0.16
SMAD6-202ENST00000557916 C5orf52A6NGY3 159 aa16.02■□□□□ 0.15
SMAD6-202ENST00000557916 J3QQQ9 107 aa16.02■□□□□ 0.15
SMAD6-202ENST00000557916 COX17Q14061 63 aa16.02■□□□□ 0.15
SMAD6-202ENST00000557916 FAM19A5Q7Z5A7 132 aaPredicted RBP16.02■□□□□ 0.15
SMAD6-202ENST00000557916 MYMXA0A1B0GTQ4 84 aa16.01■□□□□ 0.15
SMAD6-202ENST00000557916 SRRM2Q9UQ35 2752 aaKnown RBP16■□□□□ 0.15
SMAD6-202ENST00000557916 RPL37AP61513 92 aaKnown RBP16■□□□□ 0.15
SMAD6-202ENST00000557916 HERV-K104P63124 156 aa16■□□□□ 0.15
SMAD6-202ENST00000557916 E9PLD3 99 aa15.99■□□□□ 0.15
SMAD6-202ENST00000557916 LGALS3P17931 250 aaKnown RBP15.99■□□□□ 0.15
SMAD6-202ENST00000557916 KRTAP7-1Q8IUC3 87 aa15.97■□□□□ 0.15
SMAD6-202ENST00000557916 NMUP48645 174 aa15.96■□□□□ 0.15
SMAD6-202ENST00000557916 LINC00158P58513 81 aa15.96■□□□□ 0.15
SMAD6-202ENST00000557916 MEIG1Q5JSS6 88 aa15.96■□□□□ 0.15
SMAD6-202ENST00000557916 PHF5AQ7RTV0 110 aaKnown RBP15.96■□□□□ 0.15
SMAD6-202ENST00000557916 AKR1D1P51857 326 aa15.95■□□□□ 0.14
SMAD6-202ENST00000557916 SERTAD4-AS1Q5TG53 156 aa15.95■□□□□ 0.14
SMAD6-202ENST00000557916 A0A0U1RRA0 63 aa15.94■□□□□ 0.14
SMAD6-202ENST00000557916 KRTAP10-4P60372 401 aaPredicted RBP15.94■□□□□ 0.14
SMAD6-202ENST00000557916 SMIM13P0DJ93 91 aa15.94■□□□□ 0.14
SMAD6-202ENST00000557916 ATOH7Q8N100 152 aa15.94■□□□□ 0.14
SMAD6-202ENST00000557916 SND1-IT1Q9HBX3 110 aa15.94■□□□□ 0.14
SMAD6-202ENST00000557916 LINC00587B1AMM8 73 aa15.93■□□□□ 0.14
SMAD6-202ENST00000557916 M0QXV9 152 aa15.93■□□□□ 0.14
SMAD6-202ENST00000557916 PCLOQ9Y6V0 5065 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms