RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 IGKV3-7A0A075B6H7 116 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 A0A087WWC5 75 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 TRBV6-7A0A0A0MS04 114 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 ZNF815PA8K554 130 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 TMEM14DPA8MWL7 114 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 HMGN2P05204 90 aaKnown RBP1.44□□□□□ -2.18
TRAV28-201ENST00000557548 SMIM13P0DJ93 91 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 GNGT1P63211 74 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 SSBP1Q04837 148 aaKnown RBP1.44□□□□□ -2.18
TRAV28-201ENST00000557548 PSMG4Q5JS54 123 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 XAF1Q6GPH4 301 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 SFTA2Q6UW10 78 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 FAM223AQ8IWN6 122 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 CDC42SE2Q9NRR3 84 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 NDUFA4L2Q9NRX3 87 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 KLK9Q9UKQ9 250 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 V9GYH0 126 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 ASCC3Q8N3C0 2202 aaKnown RBP1.44□□□□□ -2.18
TRAV28-201ENST00000557548 PCDH15Q96QU1 1955 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 SDK1Q7Z5N4 2213 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 DOCK11Q5JSL3 2073 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 IGLV3-32A0A0A0MS00 114 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 UMAD1C9J7I0 102 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 HMGN4O00479 90 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 DNAL4O96015 105 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 SAA2P0DJI9 122 aaPredicted RBP1.43□□□□□ -2.18
TRAV28-201ENST00000557548 PDE6GP18545 87 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 C10orf55Q5SWW7 151 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 FAM74A4Q5TZK3 123 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 PP632Q6XCG6 107 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 C20orf197Q8N268 126 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 AMELXQ99217 191 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 BPESC1Q9GZL8 116 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 OTOGLQ3ZCN5 2332 aa1.43□□□□□ -2.18
TRAV28-201ENST00000557548 ASPMQ8IZT6 3477 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 WDR87Q6ZQQ6 2873 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 ZNF292O60281 2723 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 SPEGQ15772 3267 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 LOC101927531A0A1B0GV80 90 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 C7orf77A4D0Y5 90 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 F8WEM9 126 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 PPP1R17O96001 155 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 IGLV3-1P01715 115 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 CCL3L1P16619 93 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 SPAG11BQ08648 103 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 SPAG11AQ6PDA7 123 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 Q86TA4 180 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 PPP1R1CQ8WVI7 109 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 WFDC10AQ9H1F0 79 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 TMEM14BQ9NUH8 114 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 CEP250Q9BV73 2442 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 CACNA1HO95180 2353 aa1.42□□□□□ -2.18
TRAV28-201ENST00000557548 CACNA1BQ00975 2339 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 USP24Q9UPU5 2620 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 AKAP13Q12802 2813 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 FRYLO94915 3013 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 SPTBN2O15020 2390 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 CR1P17927 2039 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 A0A087WXM4 84 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 MYMXA0A1B0GTQ4 84 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 CLPSL1A2RUU4 121 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 RNASE3P12724 160 aaKnown RBP1.41□□□□□ -2.18
TRAV28-201ENST00000557548 IL9P15248 144 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 RPL37AP61513 92 aaKnown RBP1.41□□□□□ -2.18
TRAV28-201ENST00000557548 PLGLAQ15195 96 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 COX7B2Q8TF08 81 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 TMEM14CQ9P0S9 112 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 R4GMQ9 66 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 ARL2-SNX15V9GYD0 113 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 CACNA1AO00555 2505 aa1.41□□□□□ -2.18
TRAV28-201ENST00000557548 RIF1Q5UIP0 2472 aaKnown RBP1.41□□□□□ -2.18
TRAV28-201ENST00000557548 SPTBP11277 2137 aa1.4□□□□□ -2.18
TRAV28-201ENST00000557548 ESPL1Q14674 2120 aa1.4□□□□□ -2.18
TRAV28-201ENST00000557548 BPTFQ12830 3046 aa1.4□□□□□ -2.18
TRAV28-201ENST00000557548 MED12Q93074 2177 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 MED13Q9UHV7 2174 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 A0A1B0GWA3 101 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 CEBPZOSA8MTT3 80 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 IQCF6A8MYZ5 107 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 DEFB103AP81534 67 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 Q6ZRN7 208 aaPredicted RBP1.4□□□□□ -2.19
TRAV28-201ENST00000557548 C6orf201Q7Z4U5 140 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 COA5Q86WW8 74 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 ZCCHC13Q8WW36 166 aaKnown RBP1.4□□□□□ -2.19
TRAV28-201ENST00000557548 BAHCC1Q9P281 2608 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 GVINP1Q7Z2Y8 2422 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 ZFHX4Q86UP3 3567 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 LAMA1P25391 3075 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 CNOT1A5YKK6 2376 aaKnown RBP1.4□□□□□ -2.19
TRAV28-201ENST00000557548 CFAP47Q6ZTR5 3102 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 FRYQ5TBA9 3013 aa1.4□□□□□ -2.19
TRAV28-201ENST00000557548 PIEZO1Q92508 2521 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 UNC13CQ8NB66 2214 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 FAM223BA6NKX1 122 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 LEPROTL1O95214 131 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 SFTA3P0C7M3 94 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 KRTAP6-3Q3LI67 103 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 DEFB121Q5J5C9 76 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 ATP5EP2Q5VTU8 51 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms