RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 FAM104AQ969W3 186 aa4.89□□□□□ -1.63
NEDD1-211ENST00000557454 GNB1LQ9BYB4 327 aa4.89□□□□□ -1.63
NEDD1-211ENST00000557454 CNFNQ9BYD5 112 aa4.89□□□□□ -1.63
NEDD1-211ENST00000557454 TMEM126AQ9H061 195 aa4.89□□□□□ -1.63
NEDD1-211ENST00000557454 MAP1LC3B2A6NCE7 125 aa4.88□□□□□ -1.63
NEDD1-211ENST00000557454 PAGE4O60829 102 aa4.88□□□□□ -1.63
NEDD1-211ENST00000557454 C9orf62Q8N4C0 152 aa4.88□□□□□ -1.63
NEDD1-211ENST00000557454 MAP1LC3BQ9GZQ8 125 aa4.88□□□□□ -1.63
NEDD1-211ENST00000557454 IGLV5-37A0A075B6J1 123 aa4.87□□□□□ -1.63
NEDD1-211ENST00000557454 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
NEDD1-211ENST00000557454 CKS1BP61024 79 aa4.87□□□□□ -1.63
NEDD1-211ENST00000557454 MOBPQ13875 183 aa4.87□□□□□ -1.63
NEDD1-211ENST00000557454 SMIM15Q7Z3B0 74 aa4.87□□□□□ -1.63
NEDD1-211ENST00000557454 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
NEDD1-211ENST00000557454 M0R378 163 aa4.86□□□□□ -1.63
NEDD1-211ENST00000557454 NOL3O60936 208 aaKnown RBP4.86□□□□□ -1.63
NEDD1-211ENST00000557454 PRSS2P07478 247 aa4.86□□□□□ -1.63
NEDD1-211ENST00000557454 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
NEDD1-211ENST00000557454 RPL35P42766 123 aaKnown RBP4.86□□□□□ -1.63
NEDD1-211ENST00000557454 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
NEDD1-211ENST00000557454 TOMM7Q9P0U1 55 aa4.86□□□□□ -1.63
NEDD1-211ENST00000557454 ZNF706Q9Y5V0 76 aaPredicted RBP4.86□□□□□ -1.63
NEDD1-211ENST00000557454 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
NEDD1-211ENST00000557454 RPL39P62891 51 aaKnown RBP4.85□□□□□ -1.63
NEDD1-211ENST00000557454 HBBP68871 147 aa4.85□□□□□ -1.63
NEDD1-211ENST00000557454 CENPWQ5EE01 88 aa4.85□□□□□ -1.63
NEDD1-211ENST00000557454 TMUB2Q71RG4 321 aa4.85□□□□□ -1.63
NEDD1-211ENST00000557454 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
NEDD1-211ENST00000557454 IGLV9-49A0A0B4J1Y8 123 aa4.84□□□□□ -1.63
NEDD1-211ENST00000557454 IGLV6-57P01721 117 aa4.84□□□□□ -1.63
NEDD1-211ENST00000557454 LGALS3P17931 250 aaKnown RBP4.84□□□□□ -1.63
NEDD1-211ENST00000557454 VCYO14598 125 aa4.83□□□□□ -1.64
NEDD1-211ENST00000557454 PFDN1O60925 122 aa4.83□□□□□ -1.64
NEDD1-211ENST00000557454 C6orf226Q5I0X4 101 aa4.83□□□□□ -1.64
NEDD1-211ENST00000557454 AKR1C8PQ5T2L2 129 aa4.83□□□□□ -1.64
NEDD1-211ENST00000557454 TMEM18Q96B42 140 aa4.83□□□□□ -1.64
NEDD1-211ENST00000557454 GEMIN7Q9H840 131 aaKnown RBP4.83□□□□□ -1.64
NEDD1-211ENST00000557454 FAM240BA0A1B0GVZ2 78 aa4.81□□□□□ -1.64
NEDD1-211ENST00000557454 F8VRH5 84 aa4.81□□□□□ -1.64
NEDD1-211ENST00000557454 SMKR1H3BMG3 65 aa4.81□□□□□ -1.64
NEDD1-211ENST00000557454 MRPS36P82909 103 aaKnown RBP4.81□□□□□ -1.64
NEDD1-211ENST00000557454 RPL7L1Q6DKI1 246 aaKnown RBP4.81□□□□□ -1.64
NEDD1-211ENST00000557454 Q8IZM0 81 aa4.81□□□□□ -1.64
NEDD1-211ENST00000557454 SPANXA1Q9NS26 97 aa4.81□□□□□ -1.64
NEDD1-211ENST00000557454 A0A1B0GV50 99 aa4.8□□□□□ -1.64
NEDD1-211ENST00000557454 SSBP3-AS1Q7Z2R9 100 aa4.8□□□□□ -1.64
NEDD1-211ENST00000557454 LINC01551Q86U37 167 aa4.8□□□□□ -1.64
NEDD1-211ENST00000557454 LINC01561Q8N1V8 128 aa4.8□□□□□ -1.64
NEDD1-211ENST00000557454 ALKBH7Q9BT30 221 aaPredicted RBP4.8□□□□□ -1.64
NEDD1-211ENST00000557454 LINC00483Q53H64 154 aa4.79□□□□□ -1.64
NEDD1-211ENST00000557454 Q6ZN92 141 aa4.78□□□□□ -1.64
NEDD1-211ENST00000557454 TIMM17AQ99595 171 aa4.78□□□□□ -1.64
NEDD1-211ENST00000557454 TRBV20OR9-2A0A075B6H5 130 aa4.77□□□□□ -1.65
NEDD1-211ENST00000557454 GNG4P50150 75 aa4.77□□□□□ -1.65
NEDD1-211ENST00000557454 GAGE2AQ6NT46 116 aa4.77□□□□□ -1.65
NEDD1-211ENST00000557454 NRACQ8N912 160 aa4.77□□□□□ -1.65
NEDD1-211ENST00000557454 C11orf52Q96A22 123 aa4.77□□□□□ -1.65
NEDD1-211ENST00000557454 SSNA1O43805 119 aa4.76□□□□□ -1.65
NEDD1-211ENST00000557454 VPREB1P12018 145 aa4.76□□□□□ -1.65
NEDD1-211ENST00000557454 RAB4AP20338 218 aa4.76□□□□□ -1.65
NEDD1-211ENST00000557454 AMN1Q8IY45 258 aa4.76□□□□□ -1.65
NEDD1-211ENST00000557454 SMIM12Q96EX1 92 aa4.76□□□□□ -1.65
NEDD1-211ENST00000557454 BORCS7-ASMTA0A0B4J1R7 106 aa4.75□□□□□ -1.65
NEDD1-211ENST00000557454 C20orf202A1L168 122 aa4.75□□□□□ -1.65
NEDD1-211ENST00000557454 RAB5BP61020 215 aa4.75□□□□□ -1.65
NEDD1-211ENST00000557454 FAM231DQ6ZW35 169 aa4.75□□□□□ -1.65
NEDD1-211ENST00000557454 AKAP14Q86UN6 197 aa4.75□□□□□ -1.65
NEDD1-211ENST00000557454 KCNRGQ8N5I3 272 aa4.75□□□□□ -1.65
NEDD1-211ENST00000557454 SMCR5Q8TEV8 140 aa4.75□□□□□ -1.65
NEDD1-211ENST00000557454 SFT2D1Q8WV19 159 aa4.75□□□□□ -1.65
NEDD1-211ENST00000557454 IGLV4-3A0A075B6K6 122 aa4.74□□□□□ -1.65
NEDD1-211ENST00000557454 CXCL5P42830 114 aa4.74□□□□□ -1.65
NEDD1-211ENST00000557454 CCL20P78556 96 aa4.74□□□□□ -1.65
NEDD1-211ENST00000557454 TMEM191AQ9H0A3 160 aa4.74□□□□□ -1.65
NEDD1-211ENST00000557454 CHTOPQ9Y3Y2 248 aaKnown RBP4.74□□□□□ -1.65
NEDD1-211ENST00000557454 KRTAP5-9P26371 169 aa4.73□□□□□ -1.65
NEDD1-211ENST00000557454 ZC2HC1BQ5TFG8 222 aa4.73□□□□□ -1.65
NEDD1-211ENST00000557454 BIN3Q9NQY0 253 aa4.73□□□□□ -1.65
NEDD1-211ENST00000557454 MED9Q9NWA0 146 aa4.73□□□□□ -1.65
NEDD1-211ENST00000557454 PRSS47A8MTI9 375 aa4.72□□□□□ -1.65
NEDD1-211ENST00000557454 PPP1R2P9O14990 202 aa4.72□□□□□ -1.65
NEDD1-211ENST00000557454 C9orf153Q5TBE3 101 aa4.72□□□□□ -1.65
NEDD1-211ENST00000557454 FAM19A3Q7Z5A8 133 aa4.72□□□□□ -1.65
NEDD1-211ENST00000557454 Q8NDZ9 215 aa4.72□□□□□ -1.65
NEDD1-211ENST00000557454 LIMD2Q9BT23 127 aa4.72□□□□□ -1.65
NEDD1-211ENST00000557454 PPP1R17O96001 155 aa4.71□□□□□ -1.66
NEDD1-211ENST00000557454 GIPP09681 153 aaPredicted RBP4.71□□□□□ -1.66
NEDD1-211ENST00000557454 IFI27P40305 119 aaPredicted RBP4.71□□□□□ -1.66
NEDD1-211ENST00000557454 FAM213BQ8TBF2 198 aa4.71□□□□□ -1.66
NEDD1-211ENST00000557454 ENKURQ8TC29 256 aa4.71□□□□□ -1.66
NEDD1-211ENST00000557454 TMEM141Q96I45 108 aa4.71□□□□□ -1.66
NEDD1-211ENST00000557454 K7EN84 100 aa4.7□□□□□ -1.66
NEDD1-211ENST00000557454 KIAA1644Q3SXP7 199 aa4.7□□□□□ -1.66
NEDD1-211ENST00000557454 HRCT1Q6UXD1 115 aa4.7□□□□□ -1.66
NEDD1-211ENST00000557454 TEX43Q6ZNM6 134 aa4.7□□□□□ -1.66
NEDD1-211ENST00000557454 MBD3L1Q8WWY6 194 aa4.7□□□□□ -1.66
NEDD1-211ENST00000557454 C2orf88Q9BSF0 95 aa4.7□□□□□ -1.66
NEDD1-211ENST00000557454 TCAPO15273 167 aa4.69□□□□□ -1.66
NEDD1-211ENST00000557454 RAB14P61106 215 aa4.69□□□□□ -1.66
NEDD1-211ENST00000557454 BORCS7Q96B45 105 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms