RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 PLNP26678 52 aa13.61□□□□□ -0.23
FOXA1-205ENST00000557418 HIGD2BQ4VC39 106 aa13.61□□□□□ -0.23
FOXA1-205ENST00000557418 IGKCP01834 107 aa13.6□□□□□ -0.23
FOXA1-205ENST00000557418 C9orf163Q8N9P6 203 aa13.6□□□□□ -0.23
FOXA1-205ENST00000557418 OR10D4PQ8NGN7 298 aa13.6□□□□□ -0.23
FOXA1-205ENST00000557418 ORAOV1Q8WV07 137 aa13.6□□□□□ -0.23
FOXA1-205ENST00000557418 FLG2Q5D862 2391 aaPredicted RBP13.6□□□□□ -0.23
FOXA1-205ENST00000557418 H3BRM9 83 aa13.59□□□□□ -0.23
FOXA1-205ENST00000557418 SPINK8P0C7L1 97 aa13.59□□□□□ -0.23
FOXA1-205ENST00000557418 KIAA0087Q14695 138 aa13.59□□□□□ -0.23
FOXA1-205ENST00000557418 TMEM170BQ5T4T1 132 aa13.59□□□□□ -0.23
FOXA1-205ENST00000557418 CIRBP-AS1Q8TBR5 109 aa13.59□□□□□ -0.23
FOXA1-205ENST00000557418 hDV102S1A0JD36 115 aa13.58□□□□□ -0.24
FOXA1-205ENST00000557418 TMEM223A0PJW6 202 aa13.58□□□□□ -0.24
FOXA1-205ENST00000557418 SLPIP03973 132 aa13.58□□□□□ -0.24
FOXA1-205ENST00000557418 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
FOXA1-205ENST00000557418 SPAG11BQ08648 103 aa13.57□□□□□ -0.24
FOXA1-205ENST00000557418 LINC00526Q96FQ7 95 aa13.57□□□□□ -0.24
FOXA1-205ENST00000557418 C20orf202A1L168 122 aa13.55□□□□□ -0.24
FOXA1-205ENST00000557418 ZNF561-AS1K7EIQ3 104 aa13.54□□□□□ -0.24
FOXA1-205ENST00000557418 CNBPP62633 177 aaKnown RBP13.53□□□□□ -0.24
FOXA1-205ENST00000557418 Q8IZM0 81 aa13.53□□□□□ -0.24
FOXA1-205ENST00000557418 C2orf48Q96LS8 159 aa13.53□□□□□ -0.24
FOXA1-205ENST00000557418 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.52□□□□□ -0.25
FOXA1-205ENST00000557418 SDIM1Q6ZPB5 146 aa13.52□□□□□ -0.25
FOXA1-205ENST00000557418 COX7B2Q8TF08 81 aa13.51□□□□□ -0.25
FOXA1-205ENST00000557418 TOMM7Q9P0U1 55 aa13.51□□□□□ -0.25
FOXA1-205ENST00000557418 DMBT1Q9UGM3 2413 aaPredicted RBP13.5□□□□□ -0.25
FOXA1-205ENST00000557418 F8WDY8 70 aa13.49□□□□□ -0.25
FOXA1-205ENST00000557418 PRSS2P07478 247 aa13.49□□□□□ -0.25
FOXA1-205ENST00000557418 Q6ZRU5 148 aa13.49□□□□□ -0.25
FOXA1-205ENST00000557418 ATOH7Q8N100 152 aa13.49□□□□□ -0.25
FOXA1-205ENST00000557418 AKR1D1P51857 326 aa13.48□□□□□ -0.25
FOXA1-205ENST00000557418 C6orf226Q5I0X4 101 aa13.48□□□□□ -0.25
FOXA1-205ENST00000557418 C10orf25Q5T742 122 aa13.48□□□□□ -0.25
FOXA1-205ENST00000557418 C2orf82Q6UX34 121 aa13.48□□□□□ -0.25
FOXA1-205ENST00000557418 STPG4Q8N801 248 aa13.48□□□□□ -0.25
FOXA1-205ENST00000557418 DPH3Q96FX2 82 aa13.48□□□□□ -0.25
FOXA1-205ENST00000557418 CAMK2N2Q96S95 79 aa13.48□□□□□ -0.25
FOXA1-205ENST00000557418 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.48□□□□□ -0.25
FOXA1-205ENST00000557418 SYCNQ0VAF6 134 aa13.47□□□□□ -0.25
FOXA1-205ENST00000557418 UNQ6190/PRO20217Q6UXQ8 127 aa13.47□□□□□ -0.25
FOXA1-205ENST00000557418 LEPROTO15243 131 aa13.46□□□□□ -0.25
FOXA1-205ENST00000557418 SCGB1D1O95968 90 aa13.46□□□□□ -0.25
FOXA1-205ENST00000557418 HERVK_113P61574 105 aa13.46□□□□□ -0.25
FOXA1-205ENST00000557418 CARD19Q96LW7 228 aa13.46□□□□□ -0.25
FOXA1-205ENST00000557418 MYCBP2O75592 4640 aa13.45□□□□□ -0.26
FOXA1-205ENST00000557418 E9PLD3 99 aa13.45□□□□□ -0.26
FOXA1-205ENST00000557418 NDUFA1O15239 70 aa13.45□□□□□ -0.26
FOXA1-205ENST00000557418 TSPEAR-AS2P59090 65 aa13.45□□□□□ -0.26
FOXA1-205ENST00000557418 JOSD1Q15040 202 aaPredicted RBP13.45□□□□□ -0.26
FOXA1-205ENST00000557418 PANO1I0J062 215 aa13.44□□□□□ -0.26
FOXA1-205ENST00000557418 J3QL48 77 aa13.44□□□□□ -0.26
FOXA1-205ENST00000557418 CXCL5P42830 114 aa13.44□□□□□ -0.26
FOXA1-205ENST00000557418 C6orf48Q9UBA6 75 aa13.44□□□□□ -0.26
FOXA1-205ENST00000557418 CKS1BP61024 79 aa13.43□□□□□ -0.26
FOXA1-205ENST00000557418 PLEKHB2Q96CS7 222 aa13.43□□□□□ -0.26
FOXA1-205ENST00000557418 ZNF625Q96I27 306 aaPredicted RBP13.43□□□□□ -0.26
FOXA1-205ENST00000557418 KRTAP10-4P60372 401 aaPredicted RBP13.42□□□□□ -0.26
FOXA1-205ENST00000557418 RNF151Q2KHN1 245 aa13.42□□□□□ -0.26
FOXA1-205ENST00000557418 MAJINQ3KP22 176 aa13.42□□□□□ -0.26
FOXA1-205ENST00000557418 ANKRD39Q53RE8 183 aa13.42□□□□□ -0.26
FOXA1-205ENST00000557418 IGKV2D-26A0A0A0MRZ7 120 aa13.41□□□□□ -0.26
FOXA1-205ENST00000557418 RPL37AP61513 92 aaKnown RBP13.41□□□□□ -0.26
FOXA1-205ENST00000557418 HERC1Q15751 4861 aa13.41□□□□□ -0.26
FOXA1-205ENST00000557418 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
FOXA1-205ENST00000557418 J3QQQ9 107 aa13.4□□□□□ -0.26
FOXA1-205ENST00000557418 CIRBPQ14011 172 aaKnown RBP13.4□□□□□ -0.26
FOXA1-205ENST00000557418 PYY3Q5JQD4 70 aa13.4□□□□□ -0.26
FOXA1-205ENST00000557418 KRTAP29-1A8MX34 341 aaPredicted RBP13.38□□□□□ -0.27
FOXA1-205ENST00000557418 CHTF8P0CG12 524 aa13.38□□□□□ -0.27
FOXA1-205ENST00000557418 C9orf116Q5BN46 136 aaPredicted RBP13.38□□□□□ -0.27
FOXA1-205ENST00000557418 NDUFA12Q9UI09 145 aa13.37□□□□□ -0.27
FOXA1-205ENST00000557418 A0A087WYN8 130 aa13.36□□□□□ -0.27
FOXA1-205ENST00000557418 LOC105371267A0A1B0GV96 52 aa13.36□□□□□ -0.27
FOXA1-205ENST00000557418 LGALS3P17931 250 aaKnown RBP13.36□□□□□ -0.27
FOXA1-205ENST00000557418 SFTA2Q6UW10 78 aa13.36□□□□□ -0.27
FOXA1-205ENST00000557418 SPACA4Q8TDM5 124 aa13.36□□□□□ -0.27
FOXA1-205ENST00000557418 TLX1NBP0CAT3 122 aa13.35□□□□□ -0.27
FOXA1-205ENST00000557418 NMUP48645 174 aa13.34□□□□□ -0.27
FOXA1-205ENST00000557418 TTTY13Q9BZ97 58 aa13.33□□□□□ -0.28
FOXA1-205ENST00000557418 IGKV2-24A0A0C4DH68 120 aa13.32□□□□□ -0.28
FOXA1-205ENST00000557418 LOC107984640A0A0U1RRK4 108 aa13.32□□□□□ -0.28
FOXA1-205ENST00000557418 MYMXA0A1B0GTQ4 84 aa13.32□□□□□ -0.28
FOXA1-205ENST00000557418 HSBP1L1C9JCN9 74 aa13.32□□□□□ -0.28
FOXA1-205ENST00000557418 PLAC8Q9NZF1 115 aa13.32□□□□□ -0.28
FOXA1-205ENST00000557418 HERV-K104P63124 156 aa13.31□□□□□ -0.28
FOXA1-205ENST00000557418 Q6ZRP5 223 aa13.31□□□□□ -0.28
FOXA1-205ENST00000557418 PKIGQ9Y2B9 76 aa13.31□□□□□ -0.28
FOXA1-205ENST00000557418 A0A096LNI7 61 aa13.3□□□□□ -0.28
FOXA1-205ENST00000557418 NDUFC2-KCTD14E9PQ53 114 aa13.3□□□□□ -0.28
FOXA1-205ENST00000557418 OXTP01178 125 aa13.3□□□□□ -0.28
FOXA1-205ENST00000557418 ERG28Q9UKR5 140 aa13.3□□□□□ -0.28
FOXA1-205ENST00000557418 PCP2Q8IVA1 136 aa13.29□□□□□ -0.28
FOXA1-205ENST00000557418 PTTG1IPP53801 180 aa13.28□□□□□ -0.28
FOXA1-205ENST00000557418 A0A0J9YXY3 114 aa13.27□□□□□ -0.29
FOXA1-205ENST00000557418 ZNF815PA8K554 130 aa13.27□□□□□ -0.29
FOXA1-205ENST00000557418 RPL18AQ02543 176 aaKnown RBP13.27□□□□□ -0.29
FOXA1-205ENST00000557418 COX17Q14061 63 aa13.27□□□□□ -0.29
FOXA1-205ENST00000557418 C7orf33Q8WU49 177 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms