RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MRPL55Q7Z7F7 128 aaKnown RBP1.81□□□□□ -2.12
VRK1-207ENST00000557352 MRPL52Q86TS9 123 aaKnown RBP1.81□□□□□ -2.12
VRK1-207ENST00000557352 OR4C5Q8NGB2 326 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 IFI27L1Q96BM0 104 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 TMEM141Q96I45 108 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 C12orf57Q99622 126 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 MAP1LC3CQ9BXW4 147 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 NOP10Q9NPE3 64 aaKnown RBP1.81□□□□□ -2.12
VRK1-207ENST00000557352 SPANXA1Q9NS26 97 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 CYSLTR1Q9Y271 337 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 TRGV2A0A075B6R0 118 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 F8VRH5 84 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 SMKR1H3BMG3 65 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.8□□□□□ -2.12
VRK1-207ENST00000557352 BPY2O14599 106 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 SPART-AS1P0CW21 52 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 HTN1P15515 57 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 ZNF25P17030 456 aaPredicted RBP1.8□□□□□ -2.12
VRK1-207ENST00000557352 PLNP26678 52 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 UBE2D3P61077 147 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 PKIAP61925 76 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 UBE2D2P62837 147 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 DEFB135Q30KP9 77 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 FAM74A4Q5TZK3 123 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 Q6ZTI0 123 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 FAM19A3Q7Z5A8 133 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 FAM19A2Q8N3H0 131 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 SLC25A29Q8N8R3 303 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 LINC00304Q8N9R0 145 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 OR11H2Q8NH07 326 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 RPL39LQ96EH5 51 aaKnown RBP1.8□□□□□ -2.12
VRK1-207ENST00000557352 TM2D3Q9BRN9 247 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 PRADC1Q9BSG0 188 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 MRPL16Q9NX20 251 aaKnown RBP1.8□□□□□ -2.12
VRK1-207ENST00000557352 PRO0255Q9UI72 69 aa1.8□□□□□ -2.12
VRK1-207ENST00000557352 TGP01266 2768 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 A0A087WX48 190 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 TRGV4A0A0C4DH28 118 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 A0A0U1RQV1 116 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 LOC389332A0A1B0GUA5 103 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 TSTD3H0UI37 97 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 K7EIL1 84 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 CCL25O15444 150 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 DLEU1O43261 78 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 PRM2P04554 102 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 ATP5G1P05496 136 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 P0DMU3 169 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 FAM231AP0DMU4 169 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 FAM231CP0DMU5 169 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 KRTDAPP60985 99 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 DAD1P61803 113 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 SEC11AP67812 179 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 COTL1Q14019 142 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 MRPL23Q16540 153 aaKnown RBP1.79□□□□□ -2.12
VRK1-207ENST00000557352 FAM222AQ5U5X8 452 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 SBSPONQ8IVN8 264 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 BOD1L2Q8IYS8 172 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 SCGB3A1Q96QR1 104 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 AMELXQ99217 191 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 B9D2Q9BPU9 175 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 CHCHD7Q9BUK0 85 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 VAMP8Q9BV40 100 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 HHLA3Q9XRX5 114 aa1.79□□□□□ -2.12
VRK1-207ENST00000557352 PRKDCP78527 4128 aaKnown RBP1.79□□□□□ -2.12
VRK1-207ENST00000557352 DNAH7Q8WXX0 4024 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 TENM2Q9NT68 2774 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 TRBV25-1A0A075B6N4 114 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 TRBV6-8A0A0A6YYG3 113 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 C11orf86A6NJI1 115 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 HSBP1L1C9JCN9 74 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 K7EP13 123 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 SIVA1O15304 175 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 DPM2O94777 84 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 IGKCP01834 107 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 IGLC3P0DOY3 106 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 PMVKQ15126 192 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 MPV17L2Q567V2 206 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 ZNF664Q8N3J9 261 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 C15orf53Q8NAA6 179 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 ZNRF2Q8NHG8 242 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 BAALCQ8WXS3 180 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 PMCHL2Q9BQD1 86 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 TMEM243Q9BU79 118 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 UQCR10Q9UDW1 63 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 UBE2D4Q9Y2X8 147 aa1.78□□□□□ -2.12
VRK1-207ENST00000557352 IGHV3-73A0A0B4J1V6 119 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 TINCRA0A1B0GVN0 87 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 DEFB130BP0DP73 79 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 DEFB130AP0DP74 79 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 COX8AP10176 69 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 FGF6P10767 208 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 DDTP30046 118 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 TCTAP57738 103 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 RPL39P62891 51 aaKnown RBP1.77□□□□□ -2.13
VRK1-207ENST00000557352 HERVK_113P63121 156 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 C12orf74Q32Q52 190 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 SPATA45Q537H7 98 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 LELP1Q5T871 98 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 SFTA2Q6UW10 78 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 ATP6V0E2Q8NHE4 81 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms