RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MRPL35Q9NZE8 188 aaKnown RBP7.94□□□□□ -1.14
SLIRP-209ENST00000557342 PLAC8Q9NZF1 115 aa7.94□□□□□ -1.14
SLIRP-209ENST00000557342 PDZD11Q5EBL8 140 aa7.93□□□□□ -1.14
SLIRP-209ENST00000557342 HIST1H2BLQ99880 126 aa7.93□□□□□ -1.14
SLIRP-209ENST00000557342 CST9LQ9H4G1 147 aa7.93□□□□□ -1.14
SLIRP-209ENST00000557342 TINCRA0A1B0GVN0 87 aa7.92□□□□□ -1.14
SLIRP-209ENST00000557342 PRSS2P07478 247 aa7.92□□□□□ -1.14
SLIRP-209ENST00000557342 PTTG1IPP53801 180 aa7.92□□□□□ -1.14
SLIRP-209ENST00000557342 KIAA0087Q14695 138 aa7.92□□□□□ -1.14
SLIRP-209ENST00000557342 PMCHL1Q16048 86 aa7.92□□□□□ -1.14
SLIRP-209ENST00000557342 FAM19A2Q8N3H0 131 aa7.92□□□□□ -1.14
SLIRP-209ENST00000557342 STPG4Q8N801 248 aa7.92□□□□□ -1.14
SLIRP-209ENST00000557342 A0A0J9YXV3 536 aa7.91□□□□□ -1.14
SLIRP-209ENST00000557342 ATP5LO75964 103 aa7.91□□□□□ -1.14
SLIRP-209ENST00000557342 RPL37AP61513 92 aaKnown RBP7.91□□□□□ -1.14
SLIRP-209ENST00000557342 GAGE2BQ13066 116 aa7.91□□□□□ -1.14
SLIRP-209ENST00000557342 CDKN2A-AS1Q9UH64 79 aa7.91□□□□□ -1.14
SLIRP-209ENST00000557342 TRBV30A0A0K0K1B3 111 aa7.9□□□□□ -1.14
SLIRP-209ENST00000557342 FABP4P15090 132 aa7.9□□□□□ -1.14
SLIRP-209ENST00000557342 RPL18AQ02543 176 aaKnown RBP7.9□□□□□ -1.14
SLIRP-209ENST00000557342 Q8IZM0 81 aa7.9□□□□□ -1.14
SLIRP-209ENST00000557342 LINC00469Q8N7U9 141 aa7.9□□□□□ -1.14
SLIRP-209ENST00000557342 C7orf33Q8WU49 177 aa7.9□□□□□ -1.14
SLIRP-209ENST00000557342 HSPB8Q9UJY1 196 aa7.9□□□□□ -1.14
SLIRP-209ENST00000557342 FAT1Q14517 4588 aa7.89□□□□□ -1.15
SLIRP-209ENST00000557342 IGLV5-45A0A087WSX0 123 aa7.89□□□□□ -1.15
SLIRP-209ENST00000557342 LEPROTL1O95214 131 aa7.89□□□□□ -1.15
SLIRP-209ENST00000557342 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
SLIRP-209ENST00000557342 CKS1BP61024 79 aa7.89□□□□□ -1.15
SLIRP-209ENST00000557342 C6orf226Q5I0X4 101 aa7.89□□□□□ -1.15
SLIRP-209ENST00000557342 UNQ6190/PRO20217Q6UXQ8 127 aa7.89□□□□□ -1.15
SLIRP-209ENST00000557342 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
SLIRP-209ENST00000557342 C6orf48Q9UBA6 75 aa7.89□□□□□ -1.15
SLIRP-209ENST00000557342 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
SLIRP-209ENST00000557342 C10orf25Q5T742 122 aa7.88□□□□□ -1.15
SLIRP-209ENST00000557342 H3BRM9 83 aa7.87□□□□□ -1.15
SLIRP-209ENST00000557342 CXCL5P42830 114 aa7.87□□□□□ -1.15
SLIRP-209ENST00000557342 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-209ENST00000557342 C2orf82Q6UX34 121 aa7.87□□□□□ -1.15
SLIRP-209ENST00000557342 SMIM1B2RUZ4 78 aa7.86□□□□□ -1.15
SLIRP-209ENST00000557342 IGLC3P0DOY3 106 aa7.86□□□□□ -1.15
SLIRP-209ENST00000557342 IFI27L1Q96BM0 104 aa7.86□□□□□ -1.15
SLIRP-209ENST00000557342 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
SLIRP-209ENST00000557342 NDUFC2-KCTD14E9PQ53 114 aa7.84□□□□□ -1.15
SLIRP-209ENST00000557342 F8VRH5 84 aa7.84□□□□□ -1.15
SLIRP-209ENST00000557342 C3orf79P0CE67 100 aa7.84□□□□□ -1.15
SLIRP-209ENST00000557342 C9orf116Q5BN46 136 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-209ENST00000557342 Q6ZRP5 223 aa7.84□□□□□ -1.15
SLIRP-209ENST00000557342 COX7B2Q8TF08 81 aa7.84□□□□□ -1.15
SLIRP-209ENST00000557342 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
SLIRP-209ENST00000557342 A0A1W2PNN7 141 aa7.83□□□□□ -1.16
SLIRP-209ENST00000557342 SPINK8P0C7L1 97 aa7.83□□□□□ -1.16
SLIRP-209ENST00000557342 GAGE2EQ4V326 116 aa7.83□□□□□ -1.16
SLIRP-209ENST00000557342 GAGE2DQ9UEU5 116 aa7.83□□□□□ -1.16
SLIRP-209ENST00000557342 TRAV12-1A0A0B4J245 112 aa7.82□□□□□ -1.16
SLIRP-209ENST00000557342 SYS1-DBNDD2H3BUS1 97 aa7.82□□□□□ -1.16
SLIRP-209ENST00000557342 ZNF22P17026 224 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-209ENST00000557342 KRTDAPP60985 99 aa7.82□□□□□ -1.16
SLIRP-209ENST00000557342 PET117Q6UWS5 81 aa7.82□□□□□ -1.16
SLIRP-209ENST00000557342 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
SLIRP-209ENST00000557342 AKR1D1P51857 326 aa7.81□□□□□ -1.16
SLIRP-209ENST00000557342 SRRM2Q9UQ35 2752 aaKnown RBP7.8□□□□□ -1.16
SLIRP-209ENST00000557342 C20orf202A1L168 122 aa7.8□□□□□ -1.16
SLIRP-209ENST00000557342 C11orf86A6NJI1 115 aa7.8□□□□□ -1.16
SLIRP-209ENST00000557342 JOSD1Q15040 202 aaPredicted RBP7.8□□□□□ -1.16
SLIRP-209ENST00000557342 TMEM170BQ5T4T1 132 aa7.8□□□□□ -1.16
SLIRP-209ENST00000557342 LINC01545Q5VT33 79 aa7.8□□□□□ -1.16
SLIRP-209ENST00000557342 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
SLIRP-209ENST00000557342 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
SLIRP-209ENST00000557342 ODF1Q14990 250 aa7.79□□□□□ -1.16
SLIRP-209ENST00000557342 KRTAP29-1A8MX34 341 aaPredicted RBP7.78□□□□□ -1.16
SLIRP-209ENST00000557342 FAM168BA1KXE4 195 aa7.77□□□□□ -1.17
SLIRP-209ENST00000557342 H0Y8G0 127 aa7.77□□□□□ -1.17
SLIRP-209ENST00000557342 SMIM6P0DI80 62 aa7.77□□□□□ -1.17
SLIRP-209ENST00000557342 HNRNPA3P51991 378 aaKnown RBP7.77□□□□□ -1.17
SLIRP-209ENST00000557342 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
SLIRP-209ENST00000557342 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
SLIRP-209ENST00000557342 SFTA2Q6UW10 78 aa7.77□□□□□ -1.17
SLIRP-209ENST00000557342 PHF5AQ7RTV0 110 aaKnown RBP7.77□□□□□ -1.17
SLIRP-209ENST00000557342 FAM19A5Q7Z5A7 132 aaPredicted RBP7.77□□□□□ -1.17
SLIRP-209ENST00000557342 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
SLIRP-209ENST00000557342 J3QL48 77 aa7.76□□□□□ -1.17
SLIRP-209ENST00000557342 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
SLIRP-209ENST00000557342 OXTP01178 125 aa7.76□□□□□ -1.17
SLIRP-209ENST00000557342 TMEM223A0PJW6 202 aa7.75□□□□□ -1.17
SLIRP-209ENST00000557342 M0QXV9 152 aa7.75□□□□□ -1.17
SLIRP-209ENST00000557342 PLNP26678 52 aa7.75□□□□□ -1.17
SLIRP-209ENST00000557342 DPM2O94777 84 aa7.74□□□□□ -1.17
SLIRP-209ENST00000557342 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
SLIRP-209ENST00000557342 IGKCP01834 107 aa7.73□□□□□ -1.17
SLIRP-209ENST00000557342 COX17Q14061 63 aa7.73□□□□□ -1.17
SLIRP-209ENST00000557342 SPINK6Q6UWN8 80 aa7.73□□□□□ -1.17
SLIRP-209ENST00000557342 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
SLIRP-209ENST00000557342 PMCHL2Q9BQD1 86 aa7.73□□□□□ -1.17
SLIRP-209ENST00000557342 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
SLIRP-209ENST00000557342 UBE2BP63146 152 aa7.72□□□□□ -1.17
SLIRP-209ENST00000557342 LBHQ53QV2 105 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-209ENST00000557342 ERG28Q9UKR5 140 aa7.72□□□□□ -1.17
SLIRP-209ENST00000557342 PFN2P35080 140 aa7.71□□□□□ -1.18
SLIRP-209ENST00000557342 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms