RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 EIF5A2Q9GZV4 153 aaKnown RBP7.04□□□□□ -1.28
PSEN1-221ENST00000557293 PRSS2P07478 247 aa7.03□□□□□ -1.28
PSEN1-221ENST00000557293 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-221ENST00000557293 FAM19A3Q7Z5A8 133 aa7.03□□□□□ -1.28
PSEN1-221ENST00000557293 PLEKHB2Q96CS7 222 aa7.03□□□□□ -1.28
PSEN1-221ENST00000557293 AMELXQ99217 191 aa7.03□□□□□ -1.28
PSEN1-221ENST00000557293 ALKBH7Q9BT30 221 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-221ENST00000557293 D6R8Y8 96 aa7.02□□□□□ -1.29
PSEN1-221ENST00000557293 F8VRH5 84 aa7.02□□□□□ -1.29
PSEN1-221ENST00000557293 SCO1O75880 301 aa7.02□□□□□ -1.29
PSEN1-221ENST00000557293 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-221ENST00000557293 CEBPGP53567 150 aa7.02□□□□□ -1.29
PSEN1-221ENST00000557293 PRLHP81277 87 aa7.02□□□□□ -1.29
PSEN1-221ENST00000557293 FAM74A3Q4VXF1 159 aa7.02□□□□□ -1.29
PSEN1-221ENST00000557293 SPAG11AQ6PDA7 123 aa7.02□□□□□ -1.29
PSEN1-221ENST00000557293 SMIM7Q9BQ49 75 aa7.02□□□□□ -1.29
PSEN1-221ENST00000557293 C2orf66Q6UXQ4 117 aa7.01□□□□□ -1.29
PSEN1-221ENST00000557293 TEX43Q6ZNM6 134 aa7.01□□□□□ -1.29
PSEN1-221ENST00000557293 NAT8BQ9UHF3 227 aa7.01□□□□□ -1.29
PSEN1-221ENST00000557293 SMIM27A0A1W2PRY6 76 aa7□□□□□ -1.29
PSEN1-221ENST00000557293 CDKN2A-AS1Q9UH64 79 aa7□□□□□ -1.29
PSEN1-221ENST00000557293 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
PSEN1-221ENST00000557293 SLC51BQ86UW2 128 aa6.99□□□□□ -1.29
PSEN1-221ENST00000557293 IGKV2-28A0A075B6P5 120 aa6.98□□□□□ -1.29
PSEN1-221ENST00000557293 PRSS47A8MTI9 375 aa6.98□□□□□ -1.29
PSEN1-221ENST00000557293 IGKV2D-28P01615 120 aa6.98□□□□□ -1.29
PSEN1-221ENST00000557293 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
PSEN1-221ENST00000557293 A0A1B0GW15 77 aa6.97□□□□□ -1.29
PSEN1-221ENST00000557293 TMEM238C9JI98 176 aa6.97□□□□□ -1.29
PSEN1-221ENST00000557293 SRP19P09132 144 aaKnown RBP6.97□□□□□ -1.29
PSEN1-221ENST00000557293 RAB5AP20339 215 aa6.97□□□□□ -1.29
PSEN1-221ENST00000557293 XP32Q5T750 250 aa6.97□□□□□ -1.29
PSEN1-221ENST00000557293 A0A1B0GXF2 115 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 IGIPA6NJ69 53 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 M0R378 163 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 PPBPP02775 128 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 CFC1BP0CG36 223 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 FAM19A1Q7Z5A9 133 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 DAND5Q8N907 189 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 C2orf88Q9BSF0 95 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 TMEM126AQ9H061 195 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 VCX2Q9H322 139 aa6.96□□□□□ -1.3
PSEN1-221ENST00000557293 hCG_2014768A0A024R1R8 64 aa6.95□□□□□ -1.3
PSEN1-221ENST00000557293 RPL23P62829 140 aaKnown RBP6.95□□□□□ -1.3
PSEN1-221ENST00000557293 BLOC1S1P78537 153 aa6.95□□□□□ -1.3
PSEN1-221ENST00000557293 TMEM136Q6ZRR5 245 aa6.95□□□□□ -1.3
PSEN1-221ENST00000557293 NKAPP1Q8N9T2 125 aa6.95□□□□□ -1.3
PSEN1-221ENST00000557293 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
PSEN1-221ENST00000557293 CXCL5P42830 114 aa6.94□□□□□ -1.3
PSEN1-221ENST00000557293 RAB5BP61020 215 aa6.94□□□□□ -1.3
PSEN1-221ENST00000557293 MRPL54Q6P161 138 aaKnown RBP6.94□□□□□ -1.3
PSEN1-221ENST00000557293 PRELID3AQ96N28 172 aa6.94□□□□□ -1.3
PSEN1-221ENST00000557293 SPRR4Q96PI1 79 aa6.94□□□□□ -1.3
PSEN1-221ENST00000557293 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
PSEN1-221ENST00000557293 HERVK_113P63121 156 aa6.93□□□□□ -1.3
PSEN1-221ENST00000557293 ORMDL3Q8N138 153 aa6.93□□□□□ -1.3
PSEN1-221ENST00000557293 Q8NBF4 154 aa6.93□□□□□ -1.3
PSEN1-221ENST00000557293 CYSLTR1Q9Y271 337 aa6.93□□□□□ -1.3
PSEN1-221ENST00000557293 LOC389332A0A1B0GUA5 103 aa6.92□□□□□ -1.3
PSEN1-221ENST00000557293 F8W036 122 aa6.92□□□□□ -1.3
PSEN1-221ENST00000557293 NPSP0C0P6 89 aa6.92□□□□□ -1.3
PSEN1-221ENST00000557293 VPREB1P12018 145 aa6.92□□□□□ -1.3
PSEN1-221ENST00000557293 C4orf48Q5BLP8 95 aa6.92□□□□□ -1.3
PSEN1-221ENST00000557293 ALKAL2Q6UX46 152 aa6.92□□□□□ -1.3
PSEN1-221ENST00000557293 CBLN2Q8IUK8 224 aa6.92□□□□□ -1.3
PSEN1-221ENST00000557293 Q8NDZ9 215 aa6.92□□□□□ -1.3
PSEN1-221ENST00000557293 GNB1LQ9BYB4 327 aa6.92□□□□□ -1.3
PSEN1-221ENST00000557293 PDZD11Q5EBL8 140 aa6.91□□□□□ -1.3
PSEN1-221ENST00000557293 COX7B2Q8TF08 81 aa6.91□□□□□ -1.3
PSEN1-221ENST00000557293 SPINK1P00995 79 aa6.9□□□□□ -1.3
PSEN1-221ENST00000557293 SEC11AP67812 179 aa6.9□□□□□ -1.3
PSEN1-221ENST00000557293 Q8N8P6 123 aa6.9□□□□□ -1.3
PSEN1-221ENST00000557293 C9JQL5 133 aa6.89□□□□□ -1.31
PSEN1-221ENST00000557293 S100A8P05109 93 aa6.89□□□□□ -1.31
PSEN1-221ENST00000557293 ADIRFQ15847 76 aa6.89□□□□□ -1.31
PSEN1-221ENST00000557293 Q8N377 158 aa6.89□□□□□ -1.31
PSEN1-221ENST00000557293 HIGD2AQ9BW72 106 aa6.89□□□□□ -1.31
PSEN1-221ENST00000557293 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
PSEN1-221ENST00000557293 IGLV5-45A0A087WSX0 123 aa6.88□□□□□ -1.31
PSEN1-221ENST00000557293 TCTE3Q8IZS6 198 aa6.88□□□□□ -1.31
PSEN1-221ENST00000557293 MAP1LC3AQ9H492 121 aa6.86□□□□□ -1.31
PSEN1-221ENST00000557293 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
PSEN1-221ENST00000557293 LAMTOR2Q9Y2Q5 125 aa6.86□□□□□ -1.31
PSEN1-221ENST00000557293 TINCRA0A1B0GVN0 87 aa6.85□□□□□ -1.31
PSEN1-221ENST00000557293 SPINK8P0C7L1 97 aa6.85□□□□□ -1.31
PSEN1-221ENST00000557293 PFN2P35080 140 aa6.85□□□□□ -1.31
PSEN1-221ENST00000557293 ORMDL2Q53FV1 153 aa6.85□□□□□ -1.31
PSEN1-221ENST00000557293 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
PSEN1-221ENST00000557293 NAT8Q9UHE5 227 aa6.85□□□□□ -1.31
PSEN1-221ENST00000557293 RPS29P62273 56 aaKnown RBP6.84□□□□□ -1.31
PSEN1-221ENST00000557293 PCOTHQ58A44 107 aa6.84□□□□□ -1.31
PSEN1-221ENST00000557293 AKAP14Q86UN6 197 aa6.84□□□□□ -1.31
PSEN1-221ENST00000557293 TOMM6Q96B49 74 aa6.84□□□□□ -1.31
PSEN1-221ENST00000557293 PAPPA-AS1Q5QFB9 102 aa6.83□□□□□ -1.32
PSEN1-221ENST00000557293 ATP5L2Q7Z4Y8 100 aa6.83□□□□□ -1.32
PSEN1-221ENST00000557293 IGLV8-61A0A075B6I0 122 aa6.82□□□□□ -1.32
PSEN1-221ENST00000557293 K7EMI3 77 aa6.82□□□□□ -1.32
PSEN1-221ENST00000557293 ADCYAP1P18509 176 aa6.82□□□□□ -1.32
PSEN1-221ENST00000557293 RAB14P61106 215 aa6.82□□□□□ -1.32
PSEN1-221ENST00000557293 SMCR5Q8TEV8 140 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms