RNA–Protein interactions for RNA: ENST00000556993.1

SUSD6-203, Transcript of sushi domain containing 6, humanhuman

TSL 3

Gene SUSD6, Length 608 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD6-203ENST00000556993 LRP1Q07954 4544 aaKnown RBP4.88□□□□□ -1.63
SUSD6-203ENST00000556993 APOMO95445 188 aa4.87□□□□□ -1.63
SUSD6-203ENST00000556993 HBDP02042 147 aa4.87□□□□□ -1.63
SUSD6-203ENST00000556993 MALP21145 153 aa4.87□□□□□ -1.63
SUSD6-203ENST00000556993 STPG4Q8N801 248 aa4.87□□□□□ -1.63
SUSD6-203ENST00000556993 URB1-AS1Q96HZ7 61 aa4.87□□□□□ -1.63
SUSD6-203ENST00000556993 C2orf48Q96LS8 159 aa4.87□□□□□ -1.63
SUSD6-203ENST00000556993 FAT3Q8TDW7 4589 aa4.86□□□□□ -1.63
SUSD6-203ENST00000556993 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
SUSD6-203ENST00000556993 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.86□□□□□ -1.63
SUSD6-203ENST00000556993 PRR3P79522 188 aaKnown RBP4.86□□□□□ -1.63
SUSD6-203ENST00000556993 PMCHL1Q16048 86 aa4.86□□□□□ -1.63
SUSD6-203ENST00000556993 ZC2HC1BQ5TFG8 222 aa4.86□□□□□ -1.63
SUSD6-203ENST00000556993 C5orf38Q86SI9 138 aa4.86□□□□□ -1.63
SUSD6-203ENST00000556993 AMELXQ99217 191 aa4.86□□□□□ -1.63
SUSD6-203ENST00000556993 PKHD1L1Q86WI1 4243 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 IGLV4-69A0A075B6H9 119 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 LOC107984640A0A0U1RRK4 108 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 F8WDY8 70 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 HSBP1O75506 76 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 UBE2D1P51668 147 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 PTTG1IPP53801 180 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 NDUFA6P56556 154 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 SEC11AP67812 179 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 OR10D4PQ8NGN7 298 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 LINC00526Q96FQ7 95 aa4.85□□□□□ -1.63
SUSD6-203ENST00000556993 A0A096LNJ9 63 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 IGHV3OR16-9A0A0B4J2B5 98 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 ATP5LO75964 103 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 MT1HL1P0DM35 61 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 SPAG11BQ08648 103 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 PMVKQ15126 192 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 PDZD11Q5EBL8 140 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 LINC00242Q5T6M2 205 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 CAMK2N2Q96S95 79 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 CST9LQ9H4G1 147 aa4.84□□□□□ -1.63
SUSD6-203ENST00000556993 GEMIN7Q9H840 131 aaKnown RBP4.84□□□□□ -1.63
SUSD6-203ENST00000556993 SERF1AO75920 110 aa4.83□□□□□ -1.64
SUSD6-203ENST00000556993 HERVK_113P63121 156 aa4.83□□□□□ -1.64
SUSD6-203ENST00000556993 Q6ZRP5 223 aa4.83□□□□□ -1.64
SUSD6-203ENST00000556993 A0A087WZ39 114 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 A0A0J9YXV3 536 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST1H2BKO60814 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST1H2BJP06899 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST1H2BOP23527 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST1H2BBP33778 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST1H2BDP58876 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST1H2BCP62807 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 GAGE2BQ13066 116 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST2H2BEQ16778 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.82□□□□□ -1.64
SUSD6-203ENST00000556993 SPINK6Q6UWN8 80 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 FAM19A3Q7Z5A8 133 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 FAM19A2Q8N3H0 131 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 ORAOV1Q8WV07 137 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST1H2BHQ93079 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST1H2BNQ99877 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 HIST1H2BMQ99879 126 aa4.82□□□□□ -1.64
SUSD6-203ENST00000556993 MRPL35Q9NZE8 188 aaKnown RBP4.82□□□□□ -1.64
SUSD6-203ENST00000556993 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
SUSD6-203ENST00000556993 NDUFA1O15239 70 aa4.81□□□□□ -1.64
SUSD6-203ENST00000556993 LEPROTL1O95214 131 aa4.81□□□□□ -1.64
SUSD6-203ENST00000556993 RPL18AQ02543 176 aaKnown RBP4.81□□□□□ -1.64
SUSD6-203ENST00000556993 REG3GQ6UW15 175 aa4.81□□□□□ -1.64
SUSD6-203ENST00000556993 LINC01561Q8N1V8 128 aa4.81□□□□□ -1.64
SUSD6-203ENST00000556993 LINC00469Q8N7U9 141 aa4.81□□□□□ -1.64
SUSD6-203ENST00000556993 IFI27L1Q96BM0 104 aa4.81□□□□□ -1.64
SUSD6-203ENST00000556993 PACRGQ96M98 296 aaPredicted RBP4.81□□□□□ -1.64
SUSD6-203ENST00000556993 LINC01600Q96MT4 127 aa4.81□□□□□ -1.64
SUSD6-203ENST00000556993 HSPB8Q9UJY1 196 aa4.81□□□□□ -1.64
SUSD6-203ENST00000556993 NUPR1O60356 82 aa4.8□□□□□ -1.64
SUSD6-203ENST00000556993 PRSS2P07478 247 aa4.8□□□□□ -1.64
SUSD6-203ENST00000556993 TLX1NBP0CAT3 122 aa4.8□□□□□ -1.64
SUSD6-203ENST00000556993 FABP4P15090 132 aa4.8□□□□□ -1.64
SUSD6-203ENST00000556993 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
SUSD6-203ENST00000556993 CDKN2A-AS1Q9UH64 79 aa4.8□□□□□ -1.64
SUSD6-203ENST00000556993 CHTOPQ9Y3Y2 248 aaKnown RBP4.8□□□□□ -1.64
SUSD6-203ENST00000556993 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
SUSD6-203ENST00000556993 TRAV12-1A0A0B4J245 112 aa4.79□□□□□ -1.64
SUSD6-203ENST00000556993 A0A1W2PNN7 141 aa4.79□□□□□ -1.64
SUSD6-203ENST00000556993 H0Y8G0 127 aa4.79□□□□□ -1.64
SUSD6-203ENST00000556993 H3BRM9 83 aa4.79□□□□□ -1.64
SUSD6-203ENST00000556993 SRSF9Q13242 221 aaKnown RBP eCLIP4.79□□□□□ -1.64
SUSD6-203ENST00000556993 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
SUSD6-203ENST00000556993 TOMM7Q9P0U1 55 aa4.79□□□□□ -1.64
SUSD6-203ENST00000556993 IGLV5-45A0A087WSX0 123 aa4.78□□□□□ -1.64
SUSD6-203ENST00000556993 TRBV30A0A0K0K1B3 111 aa4.78□□□□□ -1.64
SUSD6-203ENST00000556993 IGLC3P0DOY3 106 aa4.78□□□□□ -1.64
SUSD6-203ENST00000556993 CKS1BP61024 79 aa4.78□□□□□ -1.64
SUSD6-203ENST00000556993 KIAA0087Q14695 138 aa4.78□□□□□ -1.64
SUSD6-203ENST00000556993 C6orf226Q5I0X4 101 aa4.78□□□□□ -1.64
SUSD6-203ENST00000556993 MAP1LC3CQ9BXW4 147 aa4.78□□□□□ -1.64
SUSD6-203ENST00000556993 C11orf86A6NJI1 115 aa4.77□□□□□ -1.65
SUSD6-203ENST00000556993 B5MCH6 92 aa4.77□□□□□ -1.65
SUSD6-203ENST00000556993 F8VRH5 84 aa4.77□□□□□ -1.65
SUSD6-203ENST00000556993 SPINK8P0C7L1 97 aa4.77□□□□□ -1.65
SUSD6-203ENST00000556993 COA6Q5JTJ3 125 aaKnown RBP4.77□□□□□ -1.65
SUSD6-203ENST00000556993 TMEM170BQ5T4T1 132 aa4.77□□□□□ -1.65
SUSD6-203ENST00000556993 C10orf25Q5T742 122 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms